Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS02505

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS02500 and A4249_RS02505 are separated by 42 nucleotidesA4249_RS02505 and A4249_RS02510 are separated by 105 nucleotides A4249_RS02500: A4249_RS02500 - DUF4232 domain-containing protein, at 536,879 to 537,793 _RS02500 A4249_RS02505: A4249_RS02505 - glycine C-acetyltransferase, at 537,836 to 539,026 _RS02505 A4249_RS02510: A4249_RS02510 - L-threonine 3-dehydrogenase, at 539,132 to 540,184 _RS02510 Position (kb) 537 538 539 540Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 537.020 kb on + strand, within A4249_RS02500at 537.021 kb on - strand, within A4249_RS02500at 537.021 kb on - strand, within A4249_RS02500at 537.056 kb on + strand, within A4249_RS02500at 537.056 kb on + strand, within A4249_RS02500at 537.056 kb on + strand, within A4249_RS02500at 537.056 kb on + strand, within A4249_RS02500at 537.056 kb on + strand, within A4249_RS02500at 537.057 kb on - strand, within A4249_RS02500at 537.057 kb on - strand, within A4249_RS02500at 537.057 kb on - strand, within A4249_RS02500at 537.057 kb on - strand, within A4249_RS02500at 537.092 kb on - strand, within A4249_RS02500at 537.092 kb on - strand, within A4249_RS02500at 537.101 kb on + strand, within A4249_RS02500at 537.101 kb on + strand, within A4249_RS02500at 537.101 kb on + strand, within A4249_RS02500at 537.101 kb on + strand, within A4249_RS02500at 537.101 kb on + strand, within A4249_RS02500at 537.101 kb on + strand, within A4249_RS02500at 537.101 kb on + strand, within A4249_RS02500at 537.101 kb on + strand, within A4249_RS02500at 537.102 kb on - strand, within A4249_RS02500at 537.102 kb on - strand, within A4249_RS02500at 537.102 kb on - strand, within A4249_RS02500at 537.102 kb on - strand, within A4249_RS02500at 537.102 kb on - strand, within A4249_RS02500at 537.102 kb on - strand, within A4249_RS02500at 537.102 kb on - strand, within A4249_RS02500at 537.102 kb on - strand, within A4249_RS02500at 537.102 kb on - strand, within A4249_RS02500at 537.102 kb on - strand, within A4249_RS02500at 537.102 kb on - strand, within A4249_RS02500at 537.102 kb on - strand, within A4249_RS02500at 537.103 kb on + strand, within A4249_RS02500at 537.103 kb on + strand, within A4249_RS02500at 537.103 kb on + strand, within A4249_RS02500at 537.103 kb on + strand, within A4249_RS02500at 537.103 kb on + strand, within A4249_RS02500at 537.103 kb on + strand, within A4249_RS02500at 537.103 kb on + strand, within A4249_RS02500at 537.104 kb on - strand, within A4249_RS02500at 537.104 kb on - strand, within A4249_RS02500at 537.104 kb on - strand, within A4249_RS02500at 537.104 kb on - strand, within A4249_RS02500at 537.104 kb on - strand, within A4249_RS02500at 537.104 kb on - strand, within A4249_RS02500at 537.141 kb on - strand, within A4249_RS02500at 537.141 kb on - strand, within A4249_RS02500at 537.141 kb on - strand, within A4249_RS02500at 537.358 kb on + strand, within A4249_RS02500at 537.358 kb on + strand, within A4249_RS02500at 537.358 kb on + strand, within A4249_RS02500at 537.439 kb on + strand, within A4249_RS02500at 537.545 kb on + strand, within A4249_RS02500at 537.545 kb on + strand, within A4249_RS02500at 537.545 kb on + strand, within A4249_RS02500at 537.545 kb on + strand, within A4249_RS02500at 537.545 kb on + strand, within A4249_RS02500at 537.545 kb on + strand, within A4249_RS02500at 537.545 kb on + strand, within A4249_RS02500at 537.546 kb on - strand, within A4249_RS02500at 537.546 kb on - strand, within A4249_RS02500at 537.546 kb on - strand, within A4249_RS02500at 537.546 kb on - strand, within A4249_RS02500at 537.546 kb on - strand, within A4249_RS02500at 537.546 kb on - strand, within A4249_RS02500at 537.602 kb on + strand, within A4249_RS02500at 537.602 kb on + strand, within A4249_RS02500at 537.602 kb on + strand, within A4249_RS02500at 537.602 kb on + strand, within A4249_RS02500at 537.602 kb on + strand, within A4249_RS02500at 537.602 kb on + strand, within A4249_RS02500at 537.602 kb on + strand, within A4249_RS02500at 537.602 kb on + strand, within A4249_RS02500at 537.603 kb on - strand, within A4249_RS02500at 537.603 kb on - strand, within A4249_RS02500at 537.603 kb on - strand, within A4249_RS02500at 537.673 kb on - strand, within A4249_RS02500at 537.673 kb on - strand, within A4249_RS02500at 537.823 kb on + strandat 537.823 kb on + strandat 537.823 kb on + strandat 537.851 kb on + strandat 537.851 kb on + strandat 537.851 kb on + strandat 537.851 kb on + strandat 537.851 kb on + strandat 537.852 kb on - strandat 537.852 kb on - strandat 537.986 kb on + strand, within A4249_RS02505at 537.986 kb on + strand, within A4249_RS02505at 537.986 kb on + strand, within A4249_RS02505at 537.986 kb on + strand, within A4249_RS02505at 537.986 kb on + strand, within A4249_RS02505at 537.986 kb on + strand, within A4249_RS02505at 537.986 kb on + strand, within A4249_RS02505at 537.986 kb on + strand, within A4249_RS02505at 537.986 kb on + strand, within A4249_RS02505at 537.986 kb on + strand, within A4249_RS02505at 537.987 kb on - strand, within A4249_RS02505at 537.987 kb on - strand, within A4249_RS02505at 537.987 kb on - strand, within A4249_RS02505at 537.987 kb on - strand, within A4249_RS02505at 537.987 kb on - strand, within A4249_RS02505at 537.987 kb on - strand, within A4249_RS02505at 537.987 kb on - strand, within A4249_RS02505at 537.987 kb on - strand, within A4249_RS02505at 537.987 kb on - strand, within A4249_RS02505at 537.987 kb on - strand, within A4249_RS02505at 537.987 kb on - strand, within A4249_RS02505at 537.987 kb on - strand, within A4249_RS02505at 537.987 kb on - strand, within A4249_RS02505at 537.987 kb on - strand, within A4249_RS02505at 538.127 kb on + strand, within A4249_RS02505at 538.128 kb on - strand, within A4249_RS02505at 538.128 kb on - strand, within A4249_RS02505at 538.128 kb on - strand, within A4249_RS02505at 538.397 kb on + strand, within A4249_RS02505at 538.397 kb on + strand, within A4249_RS02505at 538.397 kb on + strand, within A4249_RS02505at 538.397 kb on + strand, within A4249_RS02505at 538.397 kb on + strand, within A4249_RS02505at 538.398 kb on - strand, within A4249_RS02505at 538.398 kb on - strand, within A4249_RS02505at 538.398 kb on - strand, within A4249_RS02505at 538.398 kb on - strand, within A4249_RS02505at 538.398 kb on - strand, within A4249_RS02505at 538.398 kb on - strand, within A4249_RS02505at 538.400 kb on - strand, within A4249_RS02505at 538.439 kb on + strand, within A4249_RS02505at 538.439 kb on + strand, within A4249_RS02505at 538.439 kb on + strand, within A4249_RS02505at 538.439 kb on + strand, within A4249_RS02505at 538.439 kb on + strand, within A4249_RS02505at 538.440 kb on - strand, within A4249_RS02505at 538.440 kb on - strand, within A4249_RS02505at 538.514 kb on + strand, within A4249_RS02505at 538.515 kb on - strand, within A4249_RS02505at 538.637 kb on + strand, within A4249_RS02505at 538.638 kb on - strand, within A4249_RS02505at 538.638 kb on - strand, within A4249_RS02505at 538.762 kb on + strand, within A4249_RS02505at 538.763 kb on - strand, within A4249_RS02505at 538.883 kb on + strand, within A4249_RS02505at 538.883 kb on + strand, within A4249_RS02505at 538.883 kb on + strand, within A4249_RS02505at 538.883 kb on + strand, within A4249_RS02505at 538.884 kb on - strand, within A4249_RS02505at 538.884 kb on - strand, within A4249_RS02505at 538.884 kb on - strand, within A4249_RS02505at 538.884 kb on - strand, within A4249_RS02505at 538.979 kb on - strandat 539.024 kb on + strandat 539.024 kb on + strandat 539.025 kb on - strandat 539.025 kb on - strandat 539.025 kb on - strandat 539.125 kb on + strandat 539.125 kb on + strandat 539.125 kb on + strandat 539.125 kb on + strandat 539.125 kb on + strandat 539.125 kb on + strandat 539.126 kb on - strandat 539.126 kb on - strandat 539.126 kb on - strandat 539.126 kb on - strandat 539.126 kb on - strandat 539.126 kb on - strandat 539.131 kb on + strandat 539.132 kb on - strandat 539.132 kb on - strandat 539.567 kb on + strand, within A4249_RS02510at 539.568 kb on - strand, within A4249_RS02510at 539.568 kb on - strand, within A4249_RS02510at 539.674 kb on + strand, within A4249_RS02510at 539.675 kb on - strand, within A4249_RS02510at 539.791 kb on + strand, within A4249_RS02510at 539.791 kb on + strand, within A4249_RS02510at 539.791 kb on + strand, within A4249_RS02510at 539.791 kb on + strand, within A4249_RS02510at 539.792 kb on - strand, within A4249_RS02510at 539.792 kb on - strand, within A4249_RS02510at 539.792 kb on - strand, within A4249_RS02510at 539.792 kb on - strand, within A4249_RS02510at 540.008 kb on + strand, within A4249_RS02510

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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537,020 + A4249_RS02500 0.15 +0.7
537,021 - A4249_RS02500 0.16 +1.1
537,021 - A4249_RS02500 0.16 +1.5
537,056 + A4249_RS02500 0.19 -0.8
537,056 + A4249_RS02500 0.19 -0.2
537,056 + A4249_RS02500 0.19 -0.2
537,056 + A4249_RS02500 0.19 +0.5
537,056 + A4249_RS02500 0.19 +0.8
537,057 - A4249_RS02500 0.19 +0.7
537,057 - A4249_RS02500 0.19 +0.0
537,057 - A4249_RS02500 0.19 -0.2
537,057 - A4249_RS02500 0.19 +0.1
537,092 - A4249_RS02500 0.23 -0.7
537,092 - A4249_RS02500 0.23 +0.4
537,101 + A4249_RS02500 0.24 +0.6
537,101 + A4249_RS02500 0.24 -0.9
537,101 + A4249_RS02500 0.24 +1.6
537,101 + A4249_RS02500 0.24 +0.1
537,101 + A4249_RS02500 0.24 +0.2
537,101 + A4249_RS02500 0.24 +0.5
537,101 + A4249_RS02500 0.24 +0.1
537,101 + A4249_RS02500 0.24 -0.2
537,102 - A4249_RS02500 0.24 +0.1
537,102 - A4249_RS02500 0.24 +0.9
537,102 - A4249_RS02500 0.24 +0.0
537,102 - A4249_RS02500 0.24 -0.1
537,102 - A4249_RS02500 0.24 +0.1
537,102 - A4249_RS02500 0.24 +0.6
537,102 - A4249_RS02500 0.24 +0.0
537,102 - A4249_RS02500 0.24 -0.1
537,102 - A4249_RS02500 0.24 -0.1
537,102 - A4249_RS02500 0.24 -2.8
537,102 - A4249_RS02500 0.24 +0.0
537,102 - A4249_RS02500 0.24 -0.2
537,103 + A4249_RS02500 0.24 -0.4
537,103 + A4249_RS02500 0.24 -1.6
537,103 + A4249_RS02500 0.24 +0.2
537,103 + A4249_RS02500 0.24 +0.4
537,103 + A4249_RS02500 0.24 +0.3
537,103 + A4249_RS02500 0.24 -0.2
537,103 + A4249_RS02500 0.24 +0.2
537,104 - A4249_RS02500 0.25 -0.6
537,104 - A4249_RS02500 0.25 +0.2
537,104 - A4249_RS02500 0.25 +0.1
537,104 - A4249_RS02500 0.25 +0.1
537,104 - A4249_RS02500 0.25 -1.9
537,104 - A4249_RS02500 0.25 -1.3
537,141 - A4249_RS02500 0.29 +0.3
537,141 - A4249_RS02500 0.29 -0.1
537,141 - A4249_RS02500 0.29 +0.5
537,358 + A4249_RS02500 0.52 +0.5
537,358 + A4249_RS02500 0.52 +0.7
537,358 + A4249_RS02500 0.52 -0.2
537,439 + A4249_RS02500 0.61 -0.1
537,545 + A4249_RS02500 0.73 -1.1
537,545 + A4249_RS02500 0.73 -0.6
537,545 + A4249_RS02500 0.73 -0.7
537,545 + A4249_RS02500 0.73 -0.3
537,545 + A4249_RS02500 0.73 -0.5
537,545 + A4249_RS02500 0.73 -0.8
537,545 + A4249_RS02500 0.73 -1.2
537,546 - A4249_RS02500 0.73 -0.1
537,546 - A4249_RS02500 0.73 -0.2
537,546 - A4249_RS02500 0.73 +0.9
537,546 - A4249_RS02500 0.73 -0.1
537,546 - A4249_RS02500 0.73 -0.9
537,546 - A4249_RS02500 0.73 +1.2
537,602 + A4249_RS02500 0.79 -0.9
537,602 + A4249_RS02500 0.79 -0.3
537,602 + A4249_RS02500 0.79 +0.1
537,602 + A4249_RS02500 0.79 -0.3
537,602 + A4249_RS02500 0.79 +0.2
537,602 + A4249_RS02500 0.79 -0.0
537,602 + A4249_RS02500 0.79 +0.3
537,602 + A4249_RS02500 0.79 +0.2
537,603 - A4249_RS02500 0.79 +0.2
537,603 - A4249_RS02500 0.79 -0.3
537,603 - A4249_RS02500 0.79 +0.3
537,673 - A4249_RS02500 0.87 +0.0
537,673 - A4249_RS02500 0.87 -0.1
537,823 + -0.3
537,823 + -0.3
537,823 + +0.1
537,851 + -0.7
537,851 + +0.3
537,851 + +0.4
537,851 + -0.4
537,851 + +0.2
537,852 - +1.1
537,852 - -0.3
537,986 + A4249_RS02505 0.13 -0.5
537,986 + A4249_RS02505 0.13 -1.4
537,986 + A4249_RS02505 0.13 -0.4
537,986 + A4249_RS02505 0.13 -1.0
537,986 + A4249_RS02505 0.13 -0.1
537,986 + A4249_RS02505 0.13 -0.7
537,986 + A4249_RS02505 0.13 +0.2
537,986 + A4249_RS02505 0.13 -0.6
537,986 + A4249_RS02505 0.13 -0.7
537,986 + A4249_RS02505 0.13 +0.3
537,987 - A4249_RS02505 0.13 -0.2
537,987 - A4249_RS02505 0.13 -0.2
537,987 - A4249_RS02505 0.13 +0.4
537,987 - A4249_RS02505 0.13 -0.7
537,987 - A4249_RS02505 0.13 -0.7
537,987 - A4249_RS02505 0.13 -0.6
537,987 - A4249_RS02505 0.13 -0.2
537,987 - A4249_RS02505 0.13 +0.7
537,987 - A4249_RS02505 0.13 -0.7
537,987 - A4249_RS02505 0.13 +1.0
537,987 - A4249_RS02505 0.13 -0.3
537,987 - A4249_RS02505 0.13 +0.4
537,987 - A4249_RS02505 0.13 -0.7
537,987 - A4249_RS02505 0.13 +0.1
538,127 + A4249_RS02505 0.24 -0.5
538,128 - A4249_RS02505 0.25 +1.9
538,128 - A4249_RS02505 0.25 -0.6
538,128 - A4249_RS02505 0.25 +0.4
538,397 + A4249_RS02505 0.47 -0.0
538,397 + A4249_RS02505 0.47 +0.1
538,397 + A4249_RS02505 0.47 +0.0
538,397 + A4249_RS02505 0.47 +0.1
538,397 + A4249_RS02505 0.47 +0.2
538,398 - A4249_RS02505 0.47 +2.2
538,398 - A4249_RS02505 0.47 +0.5
538,398 - A4249_RS02505 0.47 +1.5
538,398 - A4249_RS02505 0.47 -0.4
538,398 - A4249_RS02505 0.47 -0.1
538,398 - A4249_RS02505 0.47 -0.1
538,400 - A4249_RS02505 0.47 -0.6
538,439 + A4249_RS02505 0.51 +0.2
538,439 + A4249_RS02505 0.51 +0.9
538,439 + A4249_RS02505 0.51 +0.0
538,439 + A4249_RS02505 0.51 +0.9
538,439 + A4249_RS02505 0.51 +0.1
538,440 - A4249_RS02505 0.51 -2.1
538,440 - A4249_RS02505 0.51 -0.0
538,514 + A4249_RS02505 0.57 -0.5
538,515 - A4249_RS02505 0.57 +0.3
538,637 + A4249_RS02505 0.67 +0.5
538,638 - A4249_RS02505 0.67 +0.2
538,638 - A4249_RS02505 0.67 -0.7
538,762 + A4249_RS02505 0.78 -1.5
538,763 - A4249_RS02505 0.78 -1.2
538,883 + A4249_RS02505 0.88 +1.4
538,883 + A4249_RS02505 0.88 +0.1
538,883 + A4249_RS02505 0.88 -0.4
538,883 + A4249_RS02505 0.88 -1.1
538,884 - A4249_RS02505 0.88 +0.6
538,884 - A4249_RS02505 0.88 +0.7
538,884 - A4249_RS02505 0.88 -1.1
538,884 - A4249_RS02505 0.88 -1.0
538,979 - -0.4
539,024 + -0.1
539,024 + -1.7
539,025 - +0.2
539,025 - +0.4
539,025 - -0.5
539,125 + -0.7
539,125 + -0.9
539,125 + +0.0
539,125 + -0.1
539,125 + +0.2
539,125 + +0.7
539,126 - +0.3
539,126 - +0.2
539,126 - +0.8
539,126 - -0.2
539,126 - -0.7
539,126 - -0.1
539,131 + -0.4
539,132 - -0.0
539,132 - +0.2
539,567 + A4249_RS02510 0.41 +0.2
539,568 - A4249_RS02510 0.41 +1.0
539,568 - A4249_RS02510 0.41 +0.3
539,674 + A4249_RS02510 0.51 -0.2
539,675 - A4249_RS02510 0.52 -0.1
539,791 + A4249_RS02510 0.63 +1.6
539,791 + A4249_RS02510 0.63 +0.5
539,791 + A4249_RS02510 0.63 -1.0
539,791 + A4249_RS02510 0.63 -0.4
539,792 - A4249_RS02510 0.63 -0.4
539,792 - A4249_RS02510 0.63 +0.7
539,792 - A4249_RS02510 0.63 +0.4
539,792 - A4249_RS02510 0.63 -0.1
540,008 + A4249_RS02510 0.83 +0.5

Or see this region's nucleotide sequence