Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05995

Experiment: Biofilm; Day4; SGW; pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm; Day4; SGW; pH7
1,381,215	+		LRK53_RS05985	0.86	-0.6
1,381,215	+		LRK53_RS05985	0.86	+1.3
1,381,215	+		LRK53_RS05985	0.86	-0.3
1,381,215	+		LRK53_RS05985	0.86	-2.0
1,381,215	+		LRK53_RS05985	0.86	+0.5
1,381,215	+		LRK53_RS05985	0.86	-0.2
1,381,215	+		LRK53_RS05985	0.86	-1.1
1,381,215	+		LRK53_RS05985	0.86	-0.6
1,381,215	+		LRK53_RS05985	0.86	-1.6
1,381,215	+		LRK53_RS05985	0.86	-1.4
1,381,215	+		LRK53_RS05985	0.86	-0.7
1,381,215	+		LRK53_RS05985	0.86	-0.8
1,381,215	+		LRK53_RS05985	0.86	-1.0
1,381,215	+		LRK53_RS05985	0.86	-0.6
1,381,215	+		LRK53_RS05985	0.86	+0.8
1,381,215	+		LRK53_RS05985	0.86	-0.4
1,381,215	+		LRK53_RS05985	0.86	-0.8
1,381,215	+		LRK53_RS05985	0.86	-0.9
1,381,215	+		LRK53_RS05985	0.86	-0.8
1,381,215	+		LRK53_RS05985	0.86	-1.1
1,381,216	-		LRK53_RS05985	0.86	-2.3
1,381,216	-		LRK53_RS05985	0.86	+0.3
1,381,216	-		LRK53_RS05985	0.86	+1.4
1,381,216	-		LRK53_RS05985	0.86	-0.0
1,381,216	-		LRK53_RS05985	0.86	+0.2
1,381,216	-		LRK53_RS05985	0.86	+0.0
1,381,216	-		LRK53_RS05985	0.86	-0.6
1,381,216	-		LRK53_RS05985	0.86	+0.1
1,381,216	-		LRK53_RS05985	0.86	+0.5
1,381,216	-		LRK53_RS05985	0.86	-0.4
1,381,216	-		LRK53_RS05985	0.86	-0.1
1,381,216	-		LRK53_RS05985	0.86	-1.7
1,381,216	-		LRK53_RS05985	0.86	+0.1
1,381,216	-		LRK53_RS05985	0.86	+0.3
1,381,216	-		LRK53_RS05985	0.86	-0.6
1,381,216	-		LRK53_RS05985	0.86	-0.1
1,381,216	-		LRK53_RS05985	0.86	+1.5
1,381,216	-		LRK53_RS05985	0.86	-0.5
1,381,216	-		LRK53_RS05985	0.86	+0.2
1,381,250	+		LRK53_RS05985	0.89	-1.4
1,381,250	+		LRK53_RS05985	0.89	-3.2
1,381,251	-		LRK53_RS05985	0.89	-0.9
1,381,251	-		LRK53_RS05985	0.89	-0.9
1,381,251	-		LRK53_RS05985	0.89	+0.5
1,381,251	-		LRK53_RS05985	0.89	+1.6
1,381,391	+				-0.4
1,381,391	+				-1.7
1,381,391	+				-1.6
1,381,391	+				-0.6
1,381,391	+				+1.0
1,381,392	-				-1.3
1,381,392	-				-1.6
1,381,392	-				-0.6
1,381,392	-				-1.4
1,381,408	+				+0.1
1,381,408	+				-2.8
1,381,408	+				-0.3
1,381,408	+				+0.0
1,381,408	+				+0.3
1,381,409	-				-0.6
1,381,409	-				-0.1
1,381,414	+				+0.3
1,381,414	+				-0.3
1,381,414	+				+0.3
1,381,414	+				-1.2
1,381,414	+				+0.1
1,381,414	+				-0.1
1,381,414	+				+2.5
1,381,414	+				+0.1
1,381,414	+				-0.1
1,381,414	+				-1.1
1,381,414	+				+0.0
1,381,414	+				-0.6
1,381,414	+				+3.0
1,381,414	+				+1.0
1,381,414	+				+0.9
1,381,414	+				-0.1
1,381,414	+				-0.8
1,381,414	+				-0.2
1,381,414	+				+1.1
1,381,414	+				-1.3
1,381,414	+				-0.6
1,381,414	+				-1.7
1,381,414	+				-1.2
1,381,414	+				-1.6
1,381,415	-				+0.1
1,381,415	-				-0.9
1,381,415	-				-0.6
1,381,415	-				+0.2
1,381,415	-				-1.3
1,381,415	-				+2.1
1,381,415	-				+1.8
1,381,415	-				-2.1
1,381,415	-				-0.6
1,381,415	-				-0.9
1,381,462	-		LRK53_RS05990	0.12	+1.1
1,381,462	-		LRK53_RS05990	0.12	-0.9
1,381,699	+		LRK53_RS05990	0.40	-1.1
1,381,700	-		LRK53_RS05990	0.40	-2.3
1,381,700	-		LRK53_RS05990	0.40	-1.6
1,381,760	+		LRK53_RS05990	0.47	-2.4
1,381,760	+		LRK53_RS05990	0.47	+3.1
1,381,760	+		LRK53_RS05990	0.47	-0.7
1,381,760	+		LRK53_RS05990	0.47	-2.2
1,381,760	+		LRK53_RS05990	0.47	-1.7
1,381,760	+		LRK53_RS05990	0.47	+0.3
1,381,760	+		LRK53_RS05990	0.47	-0.6
1,381,760	+		LRK53_RS05990	0.47	-0.4
1,381,761	-		LRK53_RS05990	0.47	+1.3
1,381,761	-		LRK53_RS05990	0.47	-0.7
1,381,761	-		LRK53_RS05990	0.47	+0.7
1,381,761	-		LRK53_RS05990	0.47	-0.1
1,381,761	-		LRK53_RS05990	0.47	-1.6
1,381,761	-		LRK53_RS05990	0.47	-1.8
1,381,761	-		LRK53_RS05990	0.47	+1.0
1,381,808	+		LRK53_RS05990	0.53	+0.2
1,381,808	+		LRK53_RS05990	0.53	+0.5
1,381,809	-		LRK53_RS05990	0.53	-0.7
1,381,818	-		LRK53_RS05990	0.54	-2.4
1,381,818	-		LRK53_RS05990	0.54	-0.4
1,381,892	+		LRK53_RS05990	0.63	-1.5
1,381,892	+		LRK53_RS05990	0.63	+1.1
1,381,892	+		LRK53_RS05990	0.63	-1.2
1,381,892	+		LRK53_RS05990	0.63	+0.2
1,381,892	+		LRK53_RS05990	0.63	+0.2
1,381,892	+		LRK53_RS05990	0.63	+0.2
1,381,892	+		LRK53_RS05990	0.63	-0.3
1,381,892	+		LRK53_RS05990	0.63	-0.3
1,381,893	-		LRK53_RS05990	0.63	+1.8
1,381,893	-		LRK53_RS05990	0.63	-1.6
1,381,893	-		LRK53_RS05990	0.63	+0.8
1,381,893	-		LRK53_RS05990	0.63	+0.3
1,381,893	-		LRK53_RS05990	0.63	-0.9
1,381,893	-		LRK53_RS05990	0.63	-1.1
1,381,893	-		LRK53_RS05990	0.63	-0.9
1,381,893	-		LRK53_RS05990	0.63	-0.4
1,381,949	+		LRK53_RS05990	0.69	-0.1
1,381,949	+		LRK53_RS05990	0.69	+0.7
1,381,949	+		LRK53_RS05990	0.69	-0.7
1,381,949	+		LRK53_RS05990	0.69	-0.3
1,381,949	+		LRK53_RS05990	0.69	-2.1
1,381,949	+		LRK53_RS05990	0.69	+0.4
1,381,949	+		LRK53_RS05990	0.69	+1.2
1,381,949	+		LRK53_RS05990	0.69	-2.4
1,381,949	+		LRK53_RS05990	0.69	-1.3
1,381,949	+		LRK53_RS05990	0.69	-0.1
1,381,949	+		LRK53_RS05990	0.69	-1.3
1,381,949	+		LRK53_RS05990	0.69	-0.6
1,381,949	+		LRK53_RS05990	0.69	-1.0
1,381,949	+		LRK53_RS05990	0.69	-0.3
1,381,949	+		LRK53_RS05990	0.69	-0.2
1,381,949	+		LRK53_RS05990	0.69	-0.2
1,381,949	+		LRK53_RS05990	0.69	-0.7
1,381,949	+		LRK53_RS05990	0.69	-1.9
1,381,949	+		LRK53_RS05990	0.69	-0.1
1,381,950	-		LRK53_RS05990	0.69	-0.2
1,381,950	-		LRK53_RS05990	0.69	-0.9
1,381,950	-		LRK53_RS05990	0.69	-0.3
1,381,950	-		LRK53_RS05990	0.69	-2.1
1,381,950	-		LRK53_RS05990	0.69	-1.6
1,381,950	-		LRK53_RS05990	0.69	-0.8
1,381,950	-		LRK53_RS05990	0.69	-0.6
1,381,950	-		LRK53_RS05990	0.69	-1.1
1,381,950	-		LRK53_RS05990	0.69	-0.6
1,381,950	-		LRK53_RS05990	0.69	-0.9
1,381,950	-		LRK53_RS05990	0.69	-0.9
1,381,950	-		LRK53_RS05990	0.69	+0.3
1,381,950	-		LRK53_RS05990	0.69	+0.1
1,382,013	-		LRK53_RS05990	0.77	+0.1
1,382,184	+				+0.7
1,382,190	+				+0.5
1,382,190	+				-0.6
1,382,190	+				-0.4
1,382,190	+				-2.1
1,382,191	-				-1.1
1,382,191	-				-0.3
1,382,191	-				-2.2
1,382,251	+				-1.1
1,382,251	+				-1.4
1,382,251	+				-1.1
1,382,251	+				-2.0
1,382,251	+				+0.4
1,382,251	+				-1.3
1,382,252	-				+0.1
1,382,252	-				-1.5
1,382,320	-				-1.8
1,382,324	+				+1.7
1,382,324	+				+0.2
1,382,324	+				-0.6
1,382,324	+				-0.8
1,382,324	+				-2.0
1,382,324	+				-0.1
1,382,324	+				+1.0
1,382,325	-				-2.0
1,382,325	-				-1.8
1,382,325	-				-0.9
1,382,325	-				-0.8
1,382,388	+		LRK53_RS05995	0.15	-1.2
1,382,388	+		LRK53_RS05995	0.15	-0.6
1,382,388	+		LRK53_RS05995	0.15	-1.7
1,382,389	-		LRK53_RS05995	0.15	-1.5
1,382,389	-		LRK53_RS05995	0.15	-0.2
1,382,389	-		LRK53_RS05995	0.15	-0.5
1,382,389	-		LRK53_RS05995	0.15	-0.2
1,382,536	+		LRK53_RS05995	0.26	-1.3
1,382,536	+		LRK53_RS05995	0.26	-1.9
1,382,536	+		LRK53_RS05995	0.26	-1.9
1,382,537	-		LRK53_RS05995	0.26	-0.6
1,382,537	-		LRK53_RS05995	0.26	-0.6
1,382,537	-		LRK53_RS05995	0.26	-0.1
1,382,537	-		LRK53_RS05995	0.26	-2.3
1,382,537	-		LRK53_RS05995	0.26	-0.3
1,382,537	-		LRK53_RS05995	0.26	-2.1
1,382,537	-		LRK53_RS05995	0.26	-0.6
1,382,537	-		LRK53_RS05995	0.26	-1.2
1,382,698	-		LRK53_RS05995	0.39	-1.2
1,382,717	+		LRK53_RS05995	0.41	-1.8
1,382,717	+		LRK53_RS05995	0.41	+0.1
1,382,717	+		LRK53_RS05995	0.41	-1.2
1,382,717	+		LRK53_RS05995	0.41	-1.5
1,382,717	+		LRK53_RS05995	0.41	-0.3
1,382,718	-		LRK53_RS05995	0.41	-0.8
1,382,718	-		LRK53_RS05995	0.41	-1.1
1,382,718	-		LRK53_RS05995	0.41	-1.3
1,382,718	-		LRK53_RS05995	0.41	-1.1
1,382,718	-		LRK53_RS05995	0.41	-1.6
1,382,718	-		LRK53_RS05995	0.41	-0.3
1,382,718	-		LRK53_RS05995	0.41	-0.8
1,382,807	+		LRK53_RS05995	0.48	+1.2
1,382,936	+		LRK53_RS05995	0.58	-0.9
1,382,936	+		LRK53_RS05995	0.58	-0.3
1,382,936	+		LRK53_RS05995	0.58	-1.3
1,382,936	+		LRK53_RS05995	0.58	-0.9
1,382,936	+		LRK53_RS05995	0.58	+1.2
1,382,936	+		LRK53_RS05995	0.58	-1.1
1,382,936	+		LRK53_RS05995	0.58	-0.2
1,382,936	+		LRK53_RS05995	0.58	-1.0
1,382,936	+		LRK53_RS05995	0.58	-1.3
1,382,937	-		LRK53_RS05995	0.58	+0.1
1,382,937	-		LRK53_RS05995	0.58	-1.1
1,382,937	-		LRK53_RS05995	0.58	-0.5
1,382,937	-		LRK53_RS05995	0.58	-1.5
1,382,937	-		LRK53_RS05995	0.58	-1.0
1,382,937	-		LRK53_RS05995	0.58	-0.1
1,382,937	-		LRK53_RS05995	0.58	+0.8
1,382,937	-		LRK53_RS05995	0.58	-1.6
1,382,937	-		LRK53_RS05995	0.58	-2.1
1,382,937	-		LRK53_RS05995	0.58	-0.9
1,382,937	-		LRK53_RS05995	0.58	-1.1
1,382,937	-		LRK53_RS05995	0.58	-2.3
1,382,937	-		LRK53_RS05995	0.58	-2.1
1,382,937	-		LRK53_RS05995	0.58	-0.8
1,382,937	-		LRK53_RS05995	0.58	-2.1
1,382,937	-		LRK53_RS05995	0.58	-1.8
1,382,937	-		LRK53_RS05995	0.58	-1.4
1,382,937	-		LRK53_RS05995	0.58	-0.3
1,382,937	-		LRK53_RS05995	0.58	-2.1
1,382,981	-		LRK53_RS05995	0.62	-1.3
1,382,995	+		LRK53_RS05995	0.63	-1.2
1,382,995	+		LRK53_RS05995	0.63	+2.5
1,382,996	-		LRK53_RS05995	0.63	-3.8
1,382,996	-		LRK53_RS05995	0.63	+0.2
1,382,996	-		LRK53_RS05995	0.63	+0.4
1,382,996	-		LRK53_RS05995	0.63	-2.3
1,383,035	-		LRK53_RS05995	0.66	-0.6
1,383,113	-		LRK53_RS05995	0.73	-1.9
1,383,165	+		LRK53_RS05995	0.77	-0.6
1,383,165	+		LRK53_RS05995	0.77	-1.5
1,383,165	+		LRK53_RS05995	0.77	-0.6
1,383,166	-		LRK53_RS05995	0.77	+0.7
1,383,167	+		LRK53_RS05995	0.77	-0.8
1,383,167	+		LRK53_RS05995	0.77	+0.2
1,383,167	+		LRK53_RS05995	0.77	-1.7
1,383,167	+		LRK53_RS05995	0.77	-1.5
1,383,167	+		LRK53_RS05995	0.77	-1.7
1,383,167	+		LRK53_RS05995	0.77	+2.0
1,383,167	+		LRK53_RS05995	0.77	-0.1
1,383,167	+		LRK53_RS05995	0.77	-1.2
1,383,167	+		LRK53_RS05995	0.77	+1.2
1,383,167	+		LRK53_RS05995	0.77	-0.6
1,383,167	+		LRK53_RS05995	0.77	-0.9
1,383,167	+		LRK53_RS05995	0.77	-0.8
1,383,167	+		LRK53_RS05995	0.77	+1.2
1,383,167	+		LRK53_RS05995	0.77	-1.9
1,383,167	+		LRK53_RS05995	0.77	-0.3
1,383,167	+		LRK53_RS05995	0.77	-0.8
1,383,167	+		LRK53_RS05995	0.77	-1.1
1,383,167	+		LRK53_RS05995	0.77	-0.6
1,383,167	+		LRK53_RS05995	0.77	+0.4
1,383,167	+		LRK53_RS05995	0.77	+2.1
1,383,167	+		LRK53_RS05995	0.77	+0.7
1,383,168	-		LRK53_RS05995	0.77	-0.6
1,383,168	-		LRK53_RS05995	0.77	-2.8
1,383,168	-		LRK53_RS05995	0.77	-1.8
1,383,168	-		LRK53_RS05995	0.77	-1.3
1,383,168	-		LRK53_RS05995	0.77	-0.5
1,383,168	-		LRK53_RS05995	0.77	-0.3
1,383,168	-		LRK53_RS05995	0.77	-3.5
1,383,168	-		LRK53_RS05995	0.77	+0.9
1,383,168	-		LRK53_RS05995	0.77	+0.5
1,383,168	-		LRK53_RS05995	0.77	+0.4
1,383,168	-		LRK53_RS05995	0.77	-0.8
1,383,168	-		LRK53_RS05995	0.77	+0.1
1,383,168	-		LRK53_RS05995	0.77	+1.4
1,383,168	-		LRK53_RS05995	0.77	+0.1
1,383,168	-		LRK53_RS05995	0.77	+1.2
1,383,168	-		LRK53_RS05995	0.77	+0.4
1,383,168	-		LRK53_RS05995	0.77	-1.8
1,383,168	-		LRK53_RS05995	0.77	+0.2
1,383,168	-		LRK53_RS05995	0.77	-1.1
1,383,168	-		LRK53_RS05995	0.77	-0.9
1,383,168	-		LRK53_RS05995	0.77	-1.8
1,383,168	-		LRK53_RS05995	0.77	-0.7
1,383,168	-		LRK53_RS05995	0.77	-0.8
1,383,168	-		LRK53_RS05995	0.77	+0.6
1,383,168	-		LRK53_RS05995	0.77	-2.1
1,383,168	-		LRK53_RS05995	0.77	-2.2
1,383,196	+		LRK53_RS05995	0.79	+1.7
1,383,196	+		LRK53_RS05995	0.79	-0.4
1,383,196	+		LRK53_RS05995	0.79	+0.2
1,383,215	+		LRK53_RS05995	0.81	-0.9
1,383,367	-				-2.1
1,383,367	-				-1.1
1,383,398	-				+1.5
1,383,495	+				-1.8
1,383,495	+				+0.7
1,383,496	-				-0.5
1,383,496	-				-2.5
1,383,504	-				+0.4
1,383,608	+				-0.0
1,383,608	+				+0.7
1,383,608	+				-0.7
1,383,608	+				-0.3
1,383,608	+				+0.1
1,383,608	+				-2.6
1,383,608	+				-0.3
1,383,608	+				+0.8
1,383,608	+				-0.1
1,383,608	+				+0.8
1,383,608	+				-1.2
1,383,609	-				-0.1
1,383,609	-				-0.3
1,383,609	-				-0.6
1,383,609	-				-0.6
1,383,628	+				-0.8
1,383,712	+		LRK53_RS06000	0.13	+0.5
1,383,713	-		LRK53_RS06000	0.13	-0.1
1,383,713	-		LRK53_RS06000	0.13	+0.8
1,383,721	+		LRK53_RS06000	0.13	+1.1
1,383,721	+		LRK53_RS06000	0.13	+0.7
1,383,721	+		LRK53_RS06000	0.13	-1.1
1,383,721	+		LRK53_RS06000	0.13	-0.7
1,383,721	+		LRK53_RS06000	0.13	-0.9
1,383,722	-		LRK53_RS06000	0.14	-1.0
1,383,722	-		LRK53_RS06000	0.14	-0.3
1,383,869	+		LRK53_RS06000	0.21	-0.7
1,383,870	-		LRK53_RS06000	0.21	-0.9
1,383,870	-		LRK53_RS06000	0.21	-1.1
1,384,009	+		LRK53_RS06000	0.28	-2.7
1,384,009	+		LRK53_RS06000	0.28	-0.1
1,384,010	-		LRK53_RS06000	0.28	-1.7
1,384,010	-		LRK53_RS06000	0.28	+1.8
1,384,043	-		LRK53_RS06000	0.30	-1.1
1,384,051	+		LRK53_RS06000	0.30	-1.1
1,384,052	-		LRK53_RS06000	0.30	+1.5
1,384,060	+		LRK53_RS06000	0.31	-1.7
1,384,060	+		LRK53_RS06000	0.31	-1.8
1,384,060	+		LRK53_RS06000	0.31	-0.7
1,384,060	+		LRK53_RS06000	0.31	-0.7
1,384,061	-		LRK53_RS06000	0.31	-1.4
1,384,061	-		LRK53_RS06000	0.31	+2.0
1,384,061	-		LRK53_RS06000	0.31	+1.6
1,384,061	-		LRK53_RS06000	0.31	-1.2
1,384,061	-		LRK53_RS06000	0.31	-1.7
1,384,061	-		LRK53_RS06000	0.31	+0.9
1,384,061	-		LRK53_RS06000	0.31	-0.1
1,384,079	-		LRK53_RS06000	0.32	+0.5
1,384,207	+		LRK53_RS06000	0.38	-1.3
1,384,207	+		LRK53_RS06000	0.38	-0.7
1,384,207	+		LRK53_RS06000	0.38	-1.4
1,384,208	-		LRK53_RS06000	0.38	-1.7
1,384,269	+		LRK53_RS06000	0.41	+1.6
1,384,269	+		LRK53_RS06000	0.41	+0.3
1,384,270	-		LRK53_RS06000	0.41	-2.2
1,384,270	-		LRK53_RS06000	0.41	-1.2
1,384,288	+		LRK53_RS06000	0.42	-1.2
1,384,288	+		LRK53_RS06000	0.42	+0.9
1,384,288	+		LRK53_RS06000	0.42	-1.2
1,384,288	+		LRK53_RS06000	0.42	-0.6
1,384,289	-		LRK53_RS06000	0.42	-1.0
1,384,289	-		LRK53_RS06000	0.42	+0.9
1,384,289	-		LRK53_RS06000	0.42	-1.3
1,384,303	+		LRK53_RS06000	0.43	-0.9
1,384,303	+		LRK53_RS06000	0.43	-0.4
1,384,303	+		LRK53_RS06000	0.43	-0.1
1,384,304	-		LRK53_RS06000	0.43	-1.6