Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04950

Experiment: Biofilm; Day4; SGW; pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm; Day4; SGW; pH7
1,158,397	+		LRK53_RS04945	0.22	-2.6
1,158,397	+		LRK53_RS04945	0.22	+1.1
1,158,397	+		LRK53_RS04945	0.22	-1.7
1,158,397	+		LRK53_RS04945	0.22	-0.9
1,158,397	+		LRK53_RS04945	0.22	+0.2
1,158,397	+		LRK53_RS04945	0.22	+0.3
1,158,397	+		LRK53_RS04945	0.22	-0.1
1,158,397	+		LRK53_RS04945	0.22	+0.7
1,158,397	+		LRK53_RS04945	0.22	-1.3
1,158,397	+		LRK53_RS04945	0.22	-0.2
1,158,397	+		LRK53_RS04945	0.22	-1.5
1,158,397	+		LRK53_RS04945	0.22	-0.6
1,158,397	+		LRK53_RS04945	0.22	+0.0
1,158,397	+		LRK53_RS04945	0.22	-0.1
1,158,397	+		LRK53_RS04945	0.22	-0.4
1,158,397	+		LRK53_RS04945	0.22	+0.5
1,158,397	+		LRK53_RS04945	0.22	-1.0
1,158,397	+		LRK53_RS04945	0.22	-1.2
1,158,397	+		LRK53_RS04945	0.22	+0.9
1,158,397	+		LRK53_RS04945	0.22	-1.7
1,158,398	-		LRK53_RS04945	0.22	+0.9
1,158,398	-		LRK53_RS04945	0.22	-2.3
1,158,398	-		LRK53_RS04945	0.22	+0.4
1,158,398	-		LRK53_RS04945	0.22	-2.3
1,158,398	-		LRK53_RS04945	0.22	-2.3
1,158,398	-		LRK53_RS04945	0.22	-1.8
1,158,398	-		LRK53_RS04945	0.22	-0.7
1,158,398	-		LRK53_RS04945	0.22	-0.1
1,158,398	-		LRK53_RS04945	0.22	-1.7
1,158,398	-		LRK53_RS04945	0.22	-0.3
1,158,398	-		LRK53_RS04945	0.22	-0.6
1,158,398	-		LRK53_RS04945	0.22	+0.0
1,158,398	-		LRK53_RS04945	0.22	-1.4
1,158,398	-		LRK53_RS04945	0.22	+1.8
1,158,455	-		LRK53_RS04945	0.27	-0.6
1,158,643	+		LRK53_RS04945	0.42	-0.9
1,158,644	-		LRK53_RS04945	0.42	-0.3
1,158,644	-		LRK53_RS04945	0.42	-0.6
1,158,644	-		LRK53_RS04945	0.42	-1.5
1,158,673	+		LRK53_RS04945	0.44	+0.3
1,158,673	+		LRK53_RS04945	0.44	-0.6
1,158,674	-		LRK53_RS04945	0.44	+0.0
1,158,674	-		LRK53_RS04945	0.44	+0.0
1,158,674	-		LRK53_RS04945	0.44	-1.5
1,158,674	-		LRK53_RS04945	0.44	+0.9
1,158,674	-		LRK53_RS04945	0.44	-0.9
1,158,739	+		LRK53_RS04945	0.50	-0.3
1,158,739	+		LRK53_RS04945	0.50	-0.9
1,158,739	+		LRK53_RS04945	0.50	-0.2
1,158,739	+		LRK53_RS04945	0.50	+0.9
1,158,739	+		LRK53_RS04945	0.50	+0.4
1,158,739	+		LRK53_RS04945	0.50	+0.7
1,158,740	-		LRK53_RS04945	0.50	-0.2
1,158,740	-		LRK53_RS04945	0.50	-2.0
1,158,740	-		LRK53_RS04945	0.50	-0.7
1,158,740	-		LRK53_RS04945	0.50	-2.0
1,158,868	+		LRK53_RS04945	0.60	-0.4
1,158,869	-		LRK53_RS04945	0.60	-2.0
1,158,892	+		LRK53_RS04945	0.62	-0.4
1,158,892	+		LRK53_RS04945	0.62	-1.7
1,158,893	-		LRK53_RS04945	0.62	-0.8
1,158,893	-		LRK53_RS04945	0.62	-1.1
1,158,970	+		LRK53_RS04945	0.69	+0.3
1,158,997	+		LRK53_RS04945	0.71	-1.3
1,158,997	+		LRK53_RS04945	0.71	-0.1
1,158,998	-		LRK53_RS04945	0.71	-1.7
1,158,998	-		LRK53_RS04945	0.71	+0.9
1,158,998	-		LRK53_RS04945	0.71	+0.4
1,159,060	+		LRK53_RS04945	0.76	+0.0
1,159,060	+		LRK53_RS04945	0.76	-0.6
1,159,060	+		LRK53_RS04945	0.76	-0.8
1,159,061	-		LRK53_RS04945	0.76	-1.3
1,159,061	-		LRK53_RS04945	0.76	-1.0
1,159,061	-		LRK53_RS04945	0.76	-0.3
1,159,061	-		LRK53_RS04945	0.76	-1.5
1,159,061	-		LRK53_RS04945	0.76	-1.1
1,159,087	+		LRK53_RS04945	0.78	-0.7
1,159,117	+		LRK53_RS04945	0.81	-1.6
1,159,117	+		LRK53_RS04945	0.81	-2.0
1,159,117	+		LRK53_RS04945	0.81	+1.3
1,159,117	+		LRK53_RS04945	0.81	-0.8
1,159,117	+		LRK53_RS04945	0.81	-0.9
1,159,118	-		LRK53_RS04945	0.81	-0.7
1,159,118	-		LRK53_RS04945	0.81	+0.7
1,159,118	-		LRK53_RS04945	0.81	-0.6
1,159,168	+		LRK53_RS04945	0.85	-0.3
1,159,169	-		LRK53_RS04945	0.85	-1.7
1,159,169	-		LRK53_RS04945	0.85	-0.7
1,159,219	+		LRK53_RS04945	0.89	-2.3
1,159,220	-		LRK53_RS04945	0.89	-0.1
1,159,243	+				-0.6
1,159,243	+				-1.0
1,159,243	+				-0.6
1,159,244	-				-1.1
1,159,244	-				+0.8
1,159,285	+				-0.9
1,159,285	+				-0.9
1,159,285	+				+0.7
1,159,286	-				-0.1
1,159,286	-				-1.2
1,159,286	-				+0.4
1,159,286	-				-1.5
1,159,286	-				-1.3
1,159,597	-		LRK53_RS04950	0.25	-1.1
1,159,785	-		LRK53_RS04950	0.44	-1.2
1,159,785	-		LRK53_RS04950	0.44	-1.4
1,160,014	-		LRK53_RS04950	0.67	+1.3
1,160,396	-				-1.2
1,160,396	-				+0.7
1,160,407	+				-1.3
1,160,407	+				-0.9
1,160,407	+				+0.4
1,160,407	+				-1.5
1,160,407	+				-1.2
1,160,407	+				+1.1
1,160,407	+				-0.5
1,160,407	+				+0.1
1,160,407	+				+0.7
1,160,407	+				-1.0
1,160,407	+				-0.7
1,160,407	+				-0.8
1,160,407	+				-0.6
1,160,407	+				+0.7
1,160,407	+				-0.4
1,160,408	-				+0.4
1,160,408	-				-1.0
1,160,408	-				-0.8
1,160,408	-				-0.5
1,160,408	-				-1.8
1,160,408	-				-0.6
1,160,408	-				-0.8
1,160,408	-				-1.3
1,160,408	-				-0.4
1,160,408	-				-3.2
1,160,408	-				-0.4
1,160,408	-				+0.7
1,160,408	-				-0.0
1,160,408	-				+0.7
1,160,408	-				-1.2
1,160,408	-				-0.1
1,160,408	-				-0.8
1,160,408	-				+0.0
1,160,408	-				+1.2
1,160,408	-				-0.6
1,160,408	-				-0.3
1,160,408	-				-1.3
1,160,408	-				-1.1
1,160,413	+				-0.9
1,160,413	+				-0.3
1,160,413	+				+0.9
1,160,413	+				-1.2
1,160,413	+				-0.8
1,160,414	-				-1.3
1,160,414	-				-0.5
1,160,414	-				-1.2
1,160,453	+				-0.1
1,160,454	-				-1.1
1,160,454	-				-0.3
1,160,454	-				-0.9
1,160,454	-				-0.4
1,160,454	-				-2.9
1,160,454	-				-0.4
1,160,620	+		LRK53_RS04955	0.23	+1.7
1,160,620	+		LRK53_RS04955	0.23	-1.0
1,160,620	+		LRK53_RS04955	0.23	-0.8
1,160,620	+		LRK53_RS04955	0.23	-2.6
1,160,620	+		LRK53_RS04955	0.23	-1.8
1,160,620	+		LRK53_RS04955	0.23	-0.5
1,160,620	+		LRK53_RS04955	0.23	+0.3
1,160,620	+		LRK53_RS04955	0.23	-0.5
1,160,621	-		LRK53_RS04955	0.23	+1.3
1,160,621	-		LRK53_RS04955	0.23	-2.2
1,160,621	-		LRK53_RS04955	0.23	+0.7
1,160,621	-		LRK53_RS04955	0.23	+0.7
1,160,621	-		LRK53_RS04955	0.23	-0.7
1,160,646	+		LRK53_RS04955	0.25	+0.3
1,160,647	-		LRK53_RS04955	0.26	-1.4
1,160,764	+		LRK53_RS04955	0.35	-0.1
1,160,765	-		LRK53_RS04955	0.35	-1.0
1,160,765	-		LRK53_RS04955	0.35	-0.6
1,160,776	+		LRK53_RS04955	0.36	-0.7
1,160,776	+		LRK53_RS04955	0.36	+1.0
1,160,777	-		LRK53_RS04955	0.36	-0.7
1,160,777	-		LRK53_RS04955	0.36	-2.7
1,160,777	-		LRK53_RS04955	0.36	+0.5
1,160,777	-		LRK53_RS04955	0.36	+0.5
1,160,827	+		LRK53_RS04955	0.40	-0.2
1,160,827	+		LRK53_RS04955	0.40	+2.3
1,160,827	+		LRK53_RS04955	0.40	-0.6
1,160,827	+		LRK53_RS04955	0.40	-1.3
1,160,827	+		LRK53_RS04955	0.40	-0.9
1,160,827	+		LRK53_RS04955	0.40	+0.7
1,160,827	+		LRK53_RS04955	0.40	+1.8
1,160,827	+		LRK53_RS04955	0.40	-0.9
1,160,828	-		LRK53_RS04955	0.40	-1.6
1,160,828	-		LRK53_RS04955	0.40	-0.6
1,160,828	-		LRK53_RS04955	0.40	+0.2
1,160,828	-		LRK53_RS04955	0.40	+0.0
1,160,828	-		LRK53_RS04955	0.40	-2.1
1,160,828	-		LRK53_RS04955	0.40	-1.0
1,160,828	-		LRK53_RS04955	0.40	+0.5
1,160,828	-		LRK53_RS04955	0.40	-0.1
1,160,828	-		LRK53_RS04955	0.40	-1.3
1,160,828	-		LRK53_RS04955	0.40	+0.1
1,160,828	-		LRK53_RS04955	0.40	-0.5
1,160,828	-		LRK53_RS04955	0.40	-0.7
1,160,828	-		LRK53_RS04955	0.40	-0.3
1,160,828	-		LRK53_RS04955	0.40	+1.0
1,160,828	-		LRK53_RS04955	0.40	-1.3
1,160,828	-		LRK53_RS04955	0.40	+1.3
1,160,869	+		LRK53_RS04955	0.44	+0.5
1,160,869	+		LRK53_RS04955	0.44	-2.1
1,160,869	+		LRK53_RS04955	0.44	-0.7
1,160,869	+		LRK53_RS04955	0.44	-0.6
1,160,869	+		LRK53_RS04955	0.44	-1.9
1,160,870	-		LRK53_RS04955	0.44	-0.7
1,160,870	-		LRK53_RS04955	0.44	-1.7
1,161,034	+		LRK53_RS04955	0.57	-0.2
1,161,034	+		LRK53_RS04955	0.57	-0.4
1,161,034	+		LRK53_RS04955	0.57	+0.1
1,161,034	+		LRK53_RS04955	0.57	-1.3
1,161,034	+		LRK53_RS04955	0.57	+0.2
1,161,034	+		LRK53_RS04955	0.57	-0.4
1,161,034	+		LRK53_RS04955	0.57	-0.7
1,161,034	+		LRK53_RS04955	0.57	+1.1
1,161,034	+		LRK53_RS04955	0.57	-0.2
1,161,034	+		LRK53_RS04955	0.57	-0.6
1,161,034	+		LRK53_RS04955	0.57	-1.0
1,161,034	+		LRK53_RS04955	0.57	-0.7
1,161,035	-		LRK53_RS04955	0.57	-1.9
1,161,035	-		LRK53_RS04955	0.57	-0.6
1,161,035	-		LRK53_RS04955	0.57	-2.1
1,161,035	-		LRK53_RS04955	0.57	-1.8
1,161,035	-		LRK53_RS04955	0.57	+1.3
1,161,035	-		LRK53_RS04955	0.57	+1.1
1,161,035	-		LRK53_RS04955	0.57	+0.9
1,161,035	-		LRK53_RS04955	0.57	-0.7
1,161,035	-		LRK53_RS04955	0.57	-0.9
1,161,035	-		LRK53_RS04955	0.57	-0.5
1,161,035	-		LRK53_RS04955	0.57	-1.0
1,161,035	-		LRK53_RS04955	0.57	-0.7
1,161,070	+		LRK53_RS04955	0.60	-1.6
1,161,070	+		LRK53_RS04955	0.60	-2.2
1,161,071	-		LRK53_RS04955	0.60	+0.1
1,161,071	-		LRK53_RS04955	0.60	-0.3
1,161,071	-		LRK53_RS04955	0.60	+0.3
1,161,071	-		LRK53_RS04955	0.60	-0.1
1,161,071	-		LRK53_RS04955	0.60	+0.1
1,161,071	-		LRK53_RS04955	0.60	-1.2
1,161,071	-		LRK53_RS04955	0.60	-1.2
1,161,071	-		LRK53_RS04955	0.60	+0.8
1,161,154	+		LRK53_RS04955	0.67	-1.4
1,161,154	+		LRK53_RS04955	0.67	+0.5
1,161,154	+		LRK53_RS04955	0.67	-0.9
1,161,155	-		LRK53_RS04955	0.67	-0.1
1,161,155	-		LRK53_RS04955	0.67	-0.9
1,161,244	+		LRK53_RS04955	0.74	+0.7
1,161,244	+		LRK53_RS04955	0.74	+0.2
1,161,244	+		LRK53_RS04955	0.74	-1.3
1,161,244	+		LRK53_RS04955	0.74	-0.9
1,161,244	+		LRK53_RS04955	0.74	-1.8
1,161,245	-		LRK53_RS04955	0.74	-1.4
1,161,245	-		LRK53_RS04955	0.74	-0.8
1,161,245	-		LRK53_RS04955	0.74	-0.7
1,161,317	-		LRK53_RS04955	0.80	+0.1
1,161,317	-		LRK53_RS04955	0.80	-1.3