Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15450

Experiment: Biofilm; Day2; SGW; pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm; Day2; SGW; pH7
3,375,525	+		LRK53_RS15440	0.85	+0.6
3,375,525	+		LRK53_RS15440	0.85	-0.7
3,375,525	+		LRK53_RS15440	0.85	+1.4
3,375,525	+		LRK53_RS15440	0.85	-0.8
3,375,525	+		LRK53_RS15440	0.85	-0.3
3,375,525	+		LRK53_RS15440	0.85	+1.1
3,375,525	+		LRK53_RS15440	0.85	-0.8
3,375,525	+		LRK53_RS15440	0.85	-1.8
3,375,526	-		LRK53_RS15440	0.85	+0.6
3,375,526	-		LRK53_RS15440	0.85	-0.5
3,375,526	-		LRK53_RS15440	0.85	-1.2
3,375,526	-		LRK53_RS15440	0.85	+1.1
3,375,526	-		LRK53_RS15440	0.85	-0.5
3,375,526	-		LRK53_RS15440	0.85	+0.9
3,375,526	-		LRK53_RS15440	0.85	-0.3
3,375,526	-		LRK53_RS15440	0.85	-1.6
3,375,526	-		LRK53_RS15440	0.85	-1.0
3,375,526	-		LRK53_RS15440	0.85	-0.4
3,375,526	-		LRK53_RS15440	0.85	-0.6
3,375,526	-		LRK53_RS15440	0.85	-0.7
3,375,526	-		LRK53_RS15440	0.85	-0.7
3,375,526	-		LRK53_RS15440	0.85	+0.3
3,375,526	-		LRK53_RS15440	0.85	-0.7
3,375,631	-				+1.4
3,375,652	-				-0.1
3,375,725	+				-0.7
3,375,726	-				+0.1
3,375,732	+				+0.3
3,375,732	+				-0.5
3,375,732	+				+0.3
3,375,732	+				-1.4
3,375,732	+				+0.7
3,375,732	+				+0.7
3,375,732	+				-1.4
3,375,732	+				+0.1
3,375,732	+				-1.3
3,375,732	+				+0.5
3,375,732	+				-0.7
3,375,732	+				-2.0
3,375,732	+				-3.1
3,375,732	+				+0.1
3,375,733	-				+0.1
3,375,733	-				-0.8
3,375,733	-				+0.6
3,375,733	-				-1.1
3,375,733	-				-2.1
3,375,733	-				-0.4
3,375,733	-				-0.9
3,375,733	-				-1.3
3,375,733	-				-0.5
3,375,733	-				-0.7
3,375,733	-				-1.2
3,375,733	-				-0.5
3,375,733	-				-0.0
3,375,733	-				+0.6
3,375,769	+				-2.2
3,375,769	+				-0.1
3,375,769	+				-1.2
3,375,769	+				+0.2
3,375,769	+				+1.5
3,375,769	+				-2.0
3,375,770	-				-1.8
3,375,770	-				-0.1
3,375,770	-				+0.5
3,375,770	-				-1.2
3,375,770	-				-3.3
3,375,770	-				+1.3
3,375,770	-				+0.5
3,375,810	-				-1.9
3,375,864	+				+1.0
3,376,026	+				-0.1
3,376,026	+				+0.1
3,376,026	+				+1.4
3,376,026	+				-0.5
3,376,026	+				-0.3
3,376,027	-				-0.8
3,376,027	-				-0.3
3,376,027	-				+0.5
3,376,027	-				-0.3
3,376,027	-				+0.7
3,376,027	-				-0.4
3,376,027	-				+1.1
3,376,027	-				-0.1
3,376,027	-				+0.3
3,376,027	-				-0.1
3,376,027	-				-1.0
3,376,141	+				+0.1
3,376,142	-				-0.4
3,376,148	+				-2.0
3,376,148	+				-0.1
3,376,148	+				-1.3
3,376,148	+				-0.8
3,376,148	+				+2.5
3,376,148	+				-0.7
3,376,148	+				+0.4
3,376,149	-				-1.2
3,376,149	-				-3.8
3,376,169	+				-2.4
3,376,169	+				+0.2
3,376,169	+				-1.4
3,376,170	-				+0.2
3,376,170	-				-1.9
3,376,373	+		LRK53_RS15445	0.78	-0.7
3,376,373	+		LRK53_RS15445	0.78	+0.8
3,376,373	+		LRK53_RS15445	0.78	+0.2
3,376,373	+		LRK53_RS15445	0.78	-0.9
3,376,373	+		LRK53_RS15445	0.78	+1.7
3,376,373	+		LRK53_RS15445	0.78	-0.4
3,376,374	-		LRK53_RS15445	0.79	-1.0
3,376,374	-		LRK53_RS15445	0.79	-1.2
3,376,374	-		LRK53_RS15445	0.79	-0.4
3,376,374	-		LRK53_RS15445	0.79	-1.1
3,376,374	-		LRK53_RS15445	0.79	-0.3
3,376,374	-		LRK53_RS15445	0.79	-0.8
3,376,374	-		LRK53_RS15445	0.79	+0.2
3,376,374	-		LRK53_RS15445	0.79	-0.7
3,376,374	-		LRK53_RS15445	0.79	-0.2
3,376,374	-		LRK53_RS15445	0.79	+1.1
3,376,374	-		LRK53_RS15445	0.79	-0.6
3,376,374	-		LRK53_RS15445	0.79	+1.4
3,376,374	-		LRK53_RS15445	0.79	-1.0
3,376,374	-		LRK53_RS15445	0.79	-0.7
3,376,430	+				+1.3
3,376,431	-				+0.3
3,376,431	-				-0.8
3,376,703	+		LRK53_RS15450	0.27	+0.3
3,376,703	+		LRK53_RS15450	0.27	+1.0
3,376,704	-		LRK53_RS15450	0.27	+1.4
3,376,853	+		LRK53_RS15450	0.43	-0.1
3,376,853	+		LRK53_RS15450	0.43	-1.7
3,376,853	+		LRK53_RS15450	0.43	-2.5
3,376,854	-		LRK53_RS15450	0.43	-0.9
3,376,854	-		LRK53_RS15450	0.43	+0.3
3,376,854	-		LRK53_RS15450	0.43	+0.0
3,376,874	+		LRK53_RS15450	0.45	-0.4
3,376,874	+		LRK53_RS15450	0.45	-0.5
3,376,874	+		LRK53_RS15450	0.45	+1.3
3,376,914	-		LRK53_RS15450	0.50	-0.7
3,376,914	-		LRK53_RS15450	0.50	-1.2
3,377,216	+		LRK53_RS15450	0.83	-0.7
3,377,216	+		LRK53_RS15450	0.83	-2.2
3,377,216	+		LRK53_RS15450	0.83	-0.3
3,377,216	+		LRK53_RS15450	0.83	-0.5
3,377,217	-		LRK53_RS15450	0.83	-1.0
3,377,217	-		LRK53_RS15450	0.83	-1.7
3,377,240	+		LRK53_RS15450	0.86	+0.1
3,377,306	+				+2.3
3,377,306	+				-1.2
3,377,306	+				+0.3
3,377,306	+				+0.2
3,377,307	-				+0.7
3,377,307	-				-1.5
3,377,307	-				+2.4
3,377,325	-				+0.5
3,377,366	+				-0.7
3,377,366	+				-0.3
3,377,366	+				+0.2
3,377,366	+				-1.5
3,377,366	+				-0.1
3,377,366	+				-0.9
3,377,367	-				-0.9
3,377,367	-				-1.5
3,377,367	-				+0.1
3,377,367	-				-2.1
3,377,367	-				-0.5
3,377,367	-				+0.5
3,377,367	-				-0.5
3,377,367	-				-1.8
3,377,367	-				+2.2
3,377,367	-				-0.9
3,377,367	-				-0.3
3,377,648	+		LRK53_RS15455	0.16	-1.0
3,377,648	+		LRK53_RS15455	0.16	-0.7
3,377,648	+		LRK53_RS15455	0.16	-0.2
3,377,648	+		LRK53_RS15455	0.16	-0.8
3,377,648	+		LRK53_RS15455	0.16	-0.4
3,377,649	-		LRK53_RS15455	0.16	-2.2
3,377,689	+		LRK53_RS15455	0.18	-0.3
3,377,690	-		LRK53_RS15455	0.18	-2.8
3,377,780	+		LRK53_RS15455	0.23	-0.5
3,377,846	+		LRK53_RS15455	0.27	-0.9
3,377,846	+		LRK53_RS15455	0.27	-0.3
3,377,846	+		LRK53_RS15455	0.27	+0.7
3,377,847	-		LRK53_RS15455	0.27	-0.6
3,377,847	-		LRK53_RS15455	0.27	-0.5
3,377,847	-		LRK53_RS15455	0.27	+0.3
3,377,876	+		LRK53_RS15455	0.29	-1.2
3,377,876	+		LRK53_RS15455	0.29	+0.1
3,377,876	+		LRK53_RS15455	0.29	-1.2
3,377,876	+		LRK53_RS15455	0.29	-0.6
3,377,876	+		LRK53_RS15455	0.29	-0.5
3,377,876	+		LRK53_RS15455	0.29	-1.0
3,377,876	+		LRK53_RS15455	0.29	-0.4
3,377,876	+		LRK53_RS15455	0.29	-0.5
3,377,876	+		LRK53_RS15455	0.29	-1.2
3,377,877	-		LRK53_RS15455	0.29	-0.2
3,377,877	-		LRK53_RS15455	0.29	-0.4
3,377,877	-		LRK53_RS15455	0.29	+0.7
3,377,877	-		LRK53_RS15455	0.29	+1.2
3,377,877	-		LRK53_RS15455	0.29	-0.6
3,377,877	-		LRK53_RS15455	0.29	-1.0
3,377,877	-		LRK53_RS15455	0.29	-0.4
3,377,877	-		LRK53_RS15455	0.29	-0.6
3,377,877	-		LRK53_RS15455	0.29	-0.2
3,377,970	-		LRK53_RS15455	0.35	-1.6
3,378,128	+		LRK53_RS15455	0.44	-2.5
3,378,128	+		LRK53_RS15455	0.44	-0.1
3,378,128	+		LRK53_RS15455	0.44	+2.4
3,378,128	+		LRK53_RS15455	0.44	+0.5
3,378,128	+		LRK53_RS15455	0.44	-1.0
3,378,128	+		LRK53_RS15455	0.44	-0.3
3,378,128	+		LRK53_RS15455	0.44	-0.3
3,378,128	+		LRK53_RS15455	0.44	-1.4
3,378,128	+		LRK53_RS15455	0.44	-1.4
3,378,129	-		LRK53_RS15455	0.44	-2.2
3,378,129	-		LRK53_RS15455	0.44	-0.9
3,378,129	-		LRK53_RS15455	0.44	-1.2
3,378,129	-		LRK53_RS15455	0.44	+0.5
3,378,129	-		LRK53_RS15455	0.44	-0.9
3,378,129	-		LRK53_RS15455	0.44	-0.5
3,378,129	-		LRK53_RS15455	0.44	+1.1
3,378,129	-		LRK53_RS15455	0.44	-0.9
3,378,129	-		LRK53_RS15455	0.44	+0.7
3,378,129	-		LRK53_RS15455	0.44	+1.3
3,378,246	-		LRK53_RS15455	0.51	+0.2
3,378,246	-		LRK53_RS15455	0.51	-1.7
3,378,246	-		LRK53_RS15455	0.51	-0.5
3,378,246	-		LRK53_RS15455	0.51	-0.6