Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14230

Experiment: Biofilm; Day2; SGW; pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm; Day2; SGW; pH7
3,120,016	+		LRK53_RS14220	0.76	-2.0
3,120,016	+		LRK53_RS14220	0.76	-0.2
3,120,016	+		LRK53_RS14220	0.76	-0.6
3,120,016	+		LRK53_RS14220	0.76	-1.3
3,120,016	+		LRK53_RS14220	0.76	-1.5
3,120,016	+		LRK53_RS14220	0.76	-0.7
3,120,016	+		LRK53_RS14220	0.76	+0.7
3,120,016	+		LRK53_RS14220	0.76	-1.2
3,120,016	+		LRK53_RS14220	0.76	-0.6
3,120,016	+		LRK53_RS14220	0.76	-1.2
3,120,016	+		LRK53_RS14220	0.76	-0.3
3,120,016	+		LRK53_RS14220	0.76	-0.5
3,120,016	+		LRK53_RS14220	0.76	-1.6
3,120,016	+		LRK53_RS14220	0.76	-2.3
3,120,016	+		LRK53_RS14220	0.76	+2.5
3,120,016	+		LRK53_RS14220	0.76	-1.5
3,120,016	+		LRK53_RS14220	0.76	-0.7
3,120,017	-		LRK53_RS14220	0.77	-0.7
3,120,017	-		LRK53_RS14220	0.77	-0.5
3,120,017	-		LRK53_RS14220	0.77	+0.3
3,120,017	-		LRK53_RS14220	0.77	-0.8
3,120,017	-		LRK53_RS14220	0.77	-0.7
3,120,017	-		LRK53_RS14220	0.77	-1.8
3,120,017	-		LRK53_RS14220	0.77	-0.7
3,120,017	-		LRK53_RS14220	0.77	+0.8
3,120,017	-		LRK53_RS14220	0.77	-0.6
3,120,017	-		LRK53_RS14220	0.77	-1.1
3,120,017	-		LRK53_RS14220	0.77	-1.3
3,120,017	-		LRK53_RS14220	0.77	-0.7
3,120,085	+				+1.1
3,120,085	+				-0.3
3,120,085	+				-1.2
3,120,085	+				-1.2
3,120,085	+				+1.2
3,120,085	+				-0.7
3,120,085	+				+0.6
3,120,085	+				-0.3
3,120,085	+				-0.7
3,120,085	+				-0.1
3,120,085	+				-1.9
3,120,085	+				-1.2
3,120,085	+				-0.6
3,120,085	+				-1.3
3,120,085	+				+0.9
3,120,085	+				+0.9
3,120,085	+				-0.4
3,120,085	+				-0.4
3,120,085	+				-0.6
3,120,085	+				+0.3
3,120,085	+				-0.3
3,120,085	+				-1.3
3,120,085	+				-0.6
3,120,085	+				+0.5
3,120,085	+				-0.7
3,120,085	+				+0.4
3,120,085	+				-1.0
3,120,085	+				-0.5
3,120,085	+				-1.0
3,120,085	+				+0.1
3,120,085	+				-0.8
3,120,085	+				-0.5
3,120,086	-				-0.2
3,120,086	-				+1.7
3,120,086	-				-0.9
3,120,086	-				+0.1
3,120,086	-				+1.3
3,120,086	-				-1.0
3,120,086	-				-0.0
3,120,086	-				+0.3
3,120,086	-				-0.5
3,120,086	-				-1.9
3,120,086	-				+0.4
3,120,086	-				-1.2
3,120,086	-				-1.3
3,120,086	-				+0.4
3,120,086	-				+1.2
3,120,086	-				-1.0
3,120,086	-				-1.1
3,120,086	-				+1.5
3,120,086	-				-0.9
3,120,086	-				-0.1
3,120,086	-				-1.5
3,120,086	-				+0.6
3,120,086	-				-0.2
3,120,086	-				-3.1
3,120,086	-				-2.7
3,120,086	-				-1.2
3,120,086	-				+0.9
3,120,086	-				+0.5
3,120,086	-				-0.9
3,120,089	+				-0.4
3,120,089	+				-2.5
3,120,089	+				-1.4
3,120,089	+				+0.0
3,120,089	+				-1.9
3,120,089	+				-0.3
3,120,089	+				-0.6
3,120,089	+				+0.2
3,120,089	+				-0.7
3,120,090	-				+0.0
3,120,090	-				+0.3
3,120,372	+		LRK53_RS14225	0.37	-0.2
3,120,372	+		LRK53_RS14225	0.37	+0.0
3,120,372	+		LRK53_RS14225	0.37	+0.4
3,120,372	+		LRK53_RS14225	0.37	+2.5
3,120,372	+		LRK53_RS14225	0.37	+0.2
3,120,372	+		LRK53_RS14225	0.37	-0.5
3,120,372	+		LRK53_RS14225	0.37	+0.4
3,120,372	+		LRK53_RS14225	0.37	-1.1
3,120,373	-		LRK53_RS14225	0.38	-0.8
3,120,373	-		LRK53_RS14225	0.38	+1.4
3,120,373	-		LRK53_RS14225	0.38	-1.2
3,120,373	-		LRK53_RS14225	0.38	+0.2
3,120,373	-		LRK53_RS14225	0.38	-1.3
3,120,373	-		LRK53_RS14225	0.38	-0.0
3,120,381	+		LRK53_RS14225	0.39	-1.8
3,120,381	+		LRK53_RS14225	0.39	+0.6
3,120,381	+		LRK53_RS14225	0.39	-1.3
3,120,381	+		LRK53_RS14225	0.39	-1.7
3,120,381	+		LRK53_RS14225	0.39	-0.7
3,120,381	+		LRK53_RS14225	0.39	-2.1
3,120,381	+		LRK53_RS14225	0.39	+1.2
3,120,382	-		LRK53_RS14225	0.39	-2.4
3,120,382	-		LRK53_RS14225	0.39	-1.2
3,120,382	-		LRK53_RS14225	0.39	+0.3
3,120,382	-		LRK53_RS14225	0.39	-0.7
3,120,382	-		LRK53_RS14225	0.39	+0.2
3,120,382	-		LRK53_RS14225	0.39	+2.9
3,120,426	+		LRK53_RS14225	0.44	+0.1
3,120,426	+		LRK53_RS14225	0.44	-0.0
3,120,426	+		LRK53_RS14225	0.44	-1.3
3,120,426	+		LRK53_RS14225	0.44	-2.6
3,120,426	+		LRK53_RS14225	0.44	+0.8
3,120,426	+		LRK53_RS14225	0.44	-0.9
3,120,426	+		LRK53_RS14225	0.44	+0.5
3,120,427	-		LRK53_RS14225	0.45	-0.3
3,120,427	-		LRK53_RS14225	0.45	+0.3
3,120,427	-		LRK53_RS14225	0.45	-1.0
3,120,427	-		LRK53_RS14225	0.45	-0.6
3,120,427	-		LRK53_RS14225	0.45	-2.3
3,120,427	-		LRK53_RS14225	0.45	+1.3
3,120,427	-		LRK53_RS14225	0.45	-1.0
3,120,427	-		LRK53_RS14225	0.45	+1.1
3,120,427	-		LRK53_RS14225	0.45	-1.8
3,120,427	-		LRK53_RS14225	0.45	+0.4
3,120,427	-		LRK53_RS14225	0.45	-0.2
3,120,427	-		LRK53_RS14225	0.45	-2.0
3,120,486	+		LRK53_RS14225	0.52	+0.4
3,120,486	+		LRK53_RS14225	0.52	-0.2
3,120,486	+		LRK53_RS14225	0.52	-0.6
3,120,487	-		LRK53_RS14225	0.52	+0.2
3,120,585	+		LRK53_RS14225	0.65	-2.1
3,120,585	+		LRK53_RS14225	0.65	-0.8
3,120,586	-		LRK53_RS14225	0.65	-0.5
3,120,586	-		LRK53_RS14225	0.65	+0.9
3,120,586	-		LRK53_RS14225	0.65	+1.2
3,120,586	-		LRK53_RS14225	0.65	-0.0
3,120,586	-		LRK53_RS14225	0.65	-0.4
3,120,586	-		LRK53_RS14225	0.65	-1.8
3,120,586	-		LRK53_RS14225	0.65	-1.5
3,120,771	+		LRK53_RS14225	0.89	-0.3
3,120,771	+		LRK53_RS14225	0.89	-2.3
3,120,771	+		LRK53_RS14225	0.89	+1.4
3,120,772	-		LRK53_RS14225	0.89	-1.1
3,120,898	+				-0.2
3,120,898	+				+1.1
3,120,898	+				-1.5
3,120,898	+				-0.2
3,120,898	+				+0.6
3,120,898	+				+0.2
3,120,898	+				-0.5
3,120,898	+				+0.4
3,120,898	+				+0.8
3,120,899	-				-3.0
3,120,899	-				-0.3
3,120,899	-				+1.5
3,120,899	-				-1.0
3,120,928	+				+0.5
3,120,928	+				-0.7
3,120,928	+				+0.2
3,120,928	+				-0.3
3,120,928	+				-1.3
3,120,928	+				-0.8
3,120,928	+				-0.7
3,120,928	+				-1.2
3,120,928	+				+0.2
3,120,929	-				-0.8
3,120,929	-				-0.7
3,120,929	-				+0.7
3,120,929	-				+1.1
3,120,929	-				+1.2
3,120,929	-				-1.8
3,120,929	-				-0.8
3,120,929	-				-0.8
3,121,067	-		LRK53_RS14230	0.37	-0.1
3,121,261	+		LRK53_RS14230	0.77	+1.4
3,121,261	+		LRK53_RS14230	0.77	-0.1
3,121,261	+		LRK53_RS14230	0.77	-0.7
3,121,261	+		LRK53_RS14230	0.77	-0.9
3,121,261	+		LRK53_RS14230	0.77	-1.0
3,121,261	+		LRK53_RS14230	0.77	-2.8
3,121,261	+		LRK53_RS14230	0.77	-0.5
3,121,261	+		LRK53_RS14230	0.77	-2.6
3,121,261	+		LRK53_RS14230	0.77	-1.2
3,121,261	+		LRK53_RS14230	0.77	+1.0
3,121,261	+		LRK53_RS14230	0.77	-0.6
3,121,262	-		LRK53_RS14230	0.77	+0.4
3,121,262	-		LRK53_RS14230	0.77	-1.0
3,121,262	-		LRK53_RS14230	0.77	-1.1
3,121,262	-		LRK53_RS14230	0.77	-1.5
3,121,262	-		LRK53_RS14230	0.77	+0.5
3,121,262	-		LRK53_RS14230	0.77	-1.2
3,121,262	-		LRK53_RS14230	0.77	-0.6
3,121,262	-		LRK53_RS14230	0.77	-1.1
3,121,262	-		LRK53_RS14230	0.77	-0.7
3,121,262	-		LRK53_RS14230	0.77	-1.7
3,121,262	-		LRK53_RS14230	0.77	-0.4
3,121,262	-		LRK53_RS14230	0.77	-1.5
3,121,262	-		LRK53_RS14230	0.77	-1.7
3,121,262	-		LRK53_RS14230	0.77	-0.8
3,121,262	-		LRK53_RS14230	0.77	-1.1
3,121,311	+		LRK53_RS14230	0.87	+0.3
3,121,311	+		LRK53_RS14230	0.87	-1.8
3,121,311	+		LRK53_RS14230	0.87	-2.3
3,121,311	+		LRK53_RS14230	0.87	-1.4
3,121,311	+		LRK53_RS14230	0.87	-0.4
3,121,311	+		LRK53_RS14230	0.87	-2.3
3,121,311	+		LRK53_RS14230	0.87	+0.0
3,121,311	+		LRK53_RS14230	0.87	-1.1
3,121,312	-		LRK53_RS14230	0.87	-0.1
3,121,312	-		LRK53_RS14230	0.87	+0.2
3,121,312	-		LRK53_RS14230	0.87	-0.8
3,121,312	-		LRK53_RS14230	0.87	+1.0
3,121,312	-		LRK53_RS14230	0.87	-1.8
3,121,312	-		LRK53_RS14230	0.87	-1.3
3,121,312	-		LRK53_RS14230	0.87	-0.3
3,121,312	-		LRK53_RS14230	0.87	-1.3
3,121,312	-		LRK53_RS14230	0.87	-0.8
3,121,312	-		LRK53_RS14230	0.87	-0.7
3,121,312	-		LRK53_RS14230	0.87	-3.6
3,121,312	-		LRK53_RS14230	0.87	+0.7
3,121,312	-		LRK53_RS14230	0.87	-0.8
3,121,312	-		LRK53_RS14230	0.87	-1.8
3,121,339	+				-0.1
3,121,339	+				-1.2
3,121,340	-				-0.1
3,121,340	-				-0.1
3,121,364	+				+0.7
3,121,365	-				-0.7
3,121,366	+				+0.8
3,121,366	+				-2.4
3,121,366	+				+0.7
3,121,366	+				-0.3
3,121,366	+				-1.0
3,121,366	+				-0.5
3,121,366	+				-0.7
3,121,366	+				-1.6
3,121,366	+				+1.4
3,121,366	+				-1.0
3,121,367	-				-0.7
3,121,367	-				+0.5
3,121,367	-				-1.5
3,121,367	-				-0.9
3,121,367	-				-0.8
3,121,367	-				+1.8
3,121,367	-				-0.2
3,121,402	+				-0.5
3,121,562	+		LRK53_RS14235	0.11	-1.3
3,121,562	+		LRK53_RS14235	0.11	-2.3
3,121,562	+		LRK53_RS14235	0.11	-1.0
3,121,562	+		LRK53_RS14235	0.11	-1.3
3,121,562	+		LRK53_RS14235	0.11	-1.3
3,121,563	-		LRK53_RS14235	0.11	+1.2
3,121,563	-		LRK53_RS14235	0.11	+0.3
3,121,563	-		LRK53_RS14235	0.11	+0.3
3,121,617	+		LRK53_RS14235	0.18	-0.8
3,121,617	+		LRK53_RS14235	0.18	-0.9
3,121,617	+		LRK53_RS14235	0.18	-1.4
3,121,617	+		LRK53_RS14235	0.18	+0.6
3,121,617	+		LRK53_RS14235	0.18	-1.0
3,121,618	-		LRK53_RS14235	0.18	-0.1
3,121,618	-		LRK53_RS14235	0.18	-0.3
3,121,770	+		LRK53_RS14235	0.37	-2.2
3,121,770	+		LRK53_RS14235	0.37	-1.0
3,121,770	+		LRK53_RS14235	0.37	+0.0
3,121,770	+		LRK53_RS14235	0.37	-1.7
3,121,770	+		LRK53_RS14235	0.37	-1.0
3,121,770	+		LRK53_RS14235	0.37	+1.3
3,121,770	+		LRK53_RS14235	0.37	-0.7
3,121,770	+		LRK53_RS14235	0.37	+0.6
3,121,770	+		LRK53_RS14235	0.37	-0.4
3,121,770	+		LRK53_RS14235	0.37	-0.7
3,121,770	+		LRK53_RS14235	0.37	-1.2
3,121,770	+		LRK53_RS14235	0.37	-1.0
3,121,770	+		LRK53_RS14235	0.37	+0.3
3,121,770	+		LRK53_RS14235	0.37	-1.0
3,121,770	+		LRK53_RS14235	0.37	-0.1
3,121,770	+		LRK53_RS14235	0.37	+0.2
3,121,770	+		LRK53_RS14235	0.37	-1.3
3,121,770	+		LRK53_RS14235	0.37	+0.1
3,121,770	+		LRK53_RS14235	0.37	-0.4
3,121,770	+		LRK53_RS14235	0.37	+0.3
3,121,770	+		LRK53_RS14235	0.37	-0.5
3,121,771	-		LRK53_RS14235	0.37	-1.9
3,121,771	-		LRK53_RS14235	0.37	+1.5
3,121,771	-		LRK53_RS14235	0.37	-2.2
3,121,771	-		LRK53_RS14235	0.37	-1.2
3,121,771	-		LRK53_RS14235	0.37	-0.3
3,121,771	-		LRK53_RS14235	0.37	-0.5
3,121,771	-		LRK53_RS14235	0.37	-1.5
3,121,899	+		LRK53_RS14235	0.53	-0.2
3,121,900	-		LRK53_RS14235	0.53	-0.1
3,122,086	+		LRK53_RS14235	0.76	-0.2
3,122,086	+		LRK53_RS14235	0.76	-0.8
3,122,086	+		LRK53_RS14235	0.76	+0.0
3,122,086	+		LRK53_RS14235	0.76	-1.9
3,122,086	+		LRK53_RS14235	0.76	-1.9
3,122,086	+		LRK53_RS14235	0.76	+0.7
3,122,086	+		LRK53_RS14235	0.76	-0.1
3,122,086	+		LRK53_RS14235	0.76	+1.9
3,122,086	+		LRK53_RS14235	0.76	-0.7
3,122,086	+		LRK53_RS14235	0.76	+1.3
3,122,086	+		LRK53_RS14235	0.76	-2.4
3,122,086	+		LRK53_RS14235	0.76	-0.1
3,122,086	+		LRK53_RS14235	0.76	-0.8
3,122,086	+		LRK53_RS14235	0.76	+1.2
3,122,087	-		LRK53_RS14235	0.76	+1.1
3,122,087	-		LRK53_RS14235	0.76	-1.3
3,122,087	-		LRK53_RS14235	0.76	+0.3
3,122,087	-		LRK53_RS14235	0.76	+1.5
3,122,087	-		LRK53_RS14235	0.76	+0.4
3,122,087	-		LRK53_RS14235	0.76	+0.0
3,122,087	-		LRK53_RS14235	0.76	-0.6
3,122,087	-		LRK53_RS14235	0.76	-0.1
3,122,087	-		LRK53_RS14235	0.76	-2.5
3,122,087	-		LRK53_RS14235	0.76	+0.4
3,122,087	-		LRK53_RS14235	0.76	-0.3
3,122,087	-		LRK53_RS14235	0.76	-0.1
3,122,169	+		LRK53_RS14235	0.86	+0.1
3,122,169	+		LRK53_RS14235	0.86	-0.4
3,122,169	+		LRK53_RS14235	0.86	+0.5
3,122,170	-		LRK53_RS14235	0.86	-0.6
3,122,170	-		LRK53_RS14235	0.86	-0.9
3,122,170	-		LRK53_RS14235	0.86	+0.4
3,122,170	-		LRK53_RS14235	0.86	-0.5
3,122,196	+		LRK53_RS14235	0.89	+0.9
3,122,196	+		LRK53_RS14235	0.89	-2.2
3,122,196	+		LRK53_RS14235	0.89	+0.1
3,122,196	+		LRK53_RS14235	0.89	-0.2
3,122,196	+		LRK53_RS14235	0.89	-0.7
3,122,196	+		LRK53_RS14235	0.89	-1.2
3,122,196	+		LRK53_RS14235	0.89	-2.4
3,122,196	+		LRK53_RS14235	0.89	-1.6
3,122,196	+		LRK53_RS14235	0.89	-1.4
3,122,197	-		LRK53_RS14235	0.89	+0.6
3,122,197	-		LRK53_RS14235	0.89	-0.7
3,122,197	-		LRK53_RS14235	0.89	-1.6
3,122,197	-		LRK53_RS14235	0.89	+0.3
3,122,197	-		LRK53_RS14235	0.89	-1.8
3,122,197	-		LRK53_RS14235	0.89	-1.1
3,122,197	-		LRK53_RS14235	0.89	+0.4
3,122,197	-		LRK53_RS14235	0.89	+0.2
3,122,197	-		LRK53_RS14235	0.89	-1.4
3,122,197	-		LRK53_RS14235	0.89	+2.5
3,122,214	+				+0.1
3,122,214	+				-0.9
3,122,247	+				-0.7
3,122,248	-				-2.0
3,122,248	-				+0.9
3,122,248	-				-0.0
3,122,248	-				-1.1