Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14190

Experiment: Biofilm; Day2; SGW; pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm; Day2; SGW; pH7
3,113,297	+		LRK53_RS14180	0.64	+2.0
3,113,297	+		LRK53_RS14180	0.64	+0.0
3,113,297	+		LRK53_RS14180	0.64	+2.2
3,113,297	+		LRK53_RS14180	0.64	-2.1
3,113,297	+		LRK53_RS14180	0.64	-1.2
3,113,297	+		LRK53_RS14180	0.64	-0.7
3,113,297	+		LRK53_RS14180	0.64	+0.7
3,113,297	+		LRK53_RS14180	0.64	+1.5
3,113,298	-		LRK53_RS14180	0.64	-1.4
3,113,298	-		LRK53_RS14180	0.64	-0.0
3,113,298	-		LRK53_RS14180	0.64	-0.2
3,113,298	-		LRK53_RS14180	0.64	-1.5
3,113,298	-		LRK53_RS14180	0.64	+0.1
3,113,298	-		LRK53_RS14180	0.64	+1.3
3,113,298	-		LRK53_RS14180	0.64	+0.5
3,113,298	-		LRK53_RS14180	0.64	+0.9
3,113,298	-		LRK53_RS14180	0.64	-1.4
3,113,298	-		LRK53_RS14180	0.64	-0.5
3,113,363	-		LRK53_RS14180	0.69	+2.4
3,113,378	+		LRK53_RS14180	0.70	-0.4
3,113,378	+		LRK53_RS14180	0.70	+0.2
3,113,379	-		LRK53_RS14180	0.70	-0.5
3,113,406	+		LRK53_RS14180	0.72	+0.1
3,113,406	+		LRK53_RS14180	0.72	-0.8
3,113,407	-		LRK53_RS14180	0.72	-0.4
3,113,407	-		LRK53_RS14180	0.72	-0.6
3,113,561	+		LRK53_RS14180	0.84	-1.8
3,113,561	+		LRK53_RS14180	0.84	-0.2
3,113,561	+		LRK53_RS14180	0.84	-0.1
3,113,561	+		LRK53_RS14180	0.84	-0.8
3,113,562	-		LRK53_RS14180	0.84	-0.6
3,113,562	-		LRK53_RS14180	0.84	-0.2
3,113,562	-		LRK53_RS14180	0.84	+2.1
3,113,597	+		LRK53_RS14180	0.87	-1.9
3,113,597	+		LRK53_RS14180	0.87	-0.1
3,113,597	+		LRK53_RS14180	0.87	-0.3
3,113,597	+		LRK53_RS14180	0.87	-0.2
3,113,597	+		LRK53_RS14180	0.87	-1.2
3,113,597	+		LRK53_RS14180	0.87	+0.0
3,113,598	-		LRK53_RS14180	0.87	-1.2
3,113,598	-		LRK53_RS14180	0.87	-0.5
3,113,598	-		LRK53_RS14180	0.87	+1.5
3,113,598	-		LRK53_RS14180	0.87	+0.9
3,113,598	-		LRK53_RS14180	0.87	-1.4
3,113,764	+				-0.2
3,113,764	+				-0.2
3,113,764	+				-0.5
3,113,764	+				-0.1
3,113,764	+				+1.2
3,113,764	+				-0.5
3,113,764	+				+1.6
3,113,765	-				+0.5
3,113,765	-				+0.5
3,113,777	+				-0.5
3,113,777	+				-0.4
3,113,777	+				+0.1
3,113,777	+				-0.2
3,113,777	+				-0.4
3,113,778	-				+0.4
3,113,778	-				-0.2
3,113,778	-				-1.0
3,113,778	-				+1.2
3,113,849	+				-0.3
3,113,849	+				-0.7
3,113,849	+				-0.6
3,113,850	+				+0.9
3,113,850	-				-1.8
3,113,850	-				-0.6
3,113,897	+				+0.3
3,113,897	+				-0.0
3,113,897	+				+0.9
3,113,898	-				-0.4
3,113,898	-				-0.3
3,113,898	-				-0.6
3,113,898	-				-0.1
3,113,922	+				-0.9
3,113,922	+				+2.6
3,113,922	+				-0.2
3,113,922	+				-1.3
3,113,922	+				-0.9
3,113,922	+				-0.4
3,113,922	+				-0.1
3,113,922	+				-0.7
3,113,922	+				-0.4
3,113,922	+				+0.8
3,113,922	+				+0.0
3,113,922	+				+1.3
3,113,922	+				+0.6
3,113,922	+				-0.5
3,113,922	+				+0.8
3,113,922	+				+0.4
3,113,922	+				+1.2
3,113,922	+				+0.3
3,113,922	+				-0.5
3,113,922	+				+1.4
3,113,922	+				+0.3
3,113,922	+				+1.0
3,113,922	+				-2.0
3,113,922	+				+1.6
3,113,923	-				+1.3
3,113,923	-				-0.2
3,113,923	-				-0.3
3,113,923	-				+0.3
3,113,923	-				-0.7
3,113,923	-				-0.2
3,113,923	-				-1.3
3,113,923	-				-0.5
3,113,923	-				+1.0
3,113,923	-				-1.9
3,113,923	-				+0.4
3,113,923	-				-0.5
3,113,923	-				-1.0
3,113,923	-				+0.4
3,113,923	-				+0.3
3,113,923	-				-0.4
3,113,923	-				+1.4
3,113,923	-				-0.4
3,113,923	-				+0.4
3,113,923	-				+0.0
3,113,923	-				-0.2
3,113,923	-				-1.4
3,113,923	-				-2.0
3,113,923	-				-1.5
3,113,923	-				+0.2
3,113,923	-				+1.5
3,113,923	-				+1.3
3,113,923	-				-1.4
3,113,924	+				-0.2
3,113,924	+				+0.2
3,113,924	+				+1.9
3,113,924	+				-0.2
3,113,924	+				+1.3
3,113,924	+				-1.9
3,113,924	+				-0.0
3,113,924	+				+1.2
3,113,924	+				-1.3
3,113,924	+				-0.7
3,113,924	+				+1.0
3,113,924	+				-2.1
3,113,924	+				+1.1
3,113,924	+				-2.0
3,113,924	+				-3.1
3,113,924	+				+0.4
3,113,924	+				+1.0
3,113,924	+				+1.0
3,113,924	+				+0.2
3,113,924	+				-2.6
3,113,924	+				-1.6
3,113,924	+				+0.1
3,113,924	+				+1.0
3,113,924	+				+0.2
3,113,924	+				-1.0
3,113,924	+				-1.3
3,113,924	+				+0.4
3,113,925	-				-0.4
3,113,925	-				+0.2
3,113,925	-				-0.2
3,113,925	-				-1.2
3,113,925	-				+0.6
3,113,925	-				-2.0
3,113,925	-				-0.2
3,113,925	-				-1.4
3,113,925	-				-0.5
3,113,925	-				+0.7
3,113,925	-				+0.2
3,113,925	-				-0.4
3,113,925	-				-1.5
3,113,925	-				+0.6
3,113,925	-				-2.3
3,113,925	-				-0.6
3,113,925	-				-0.8
3,113,925	-				+0.9
3,113,925	-				+0.2
3,113,925	-				-0.5
3,113,925	-				-1.0
3,113,925	-				+0.1
3,113,925	-				-1.1
3,113,925	-				+0.2
3,113,925	-				+0.7
3,113,925	-				-2.0
3,113,925	-				-1.7
3,113,925	-				-1.7
3,114,057	+		LRK53_RS14185	0.65	-1.2
3,114,057	+		LRK53_RS14185	0.65	-0.4
3,114,057	+		LRK53_RS14185	0.65	+0.6
3,114,057	+		LRK53_RS14185	0.65	-0.5
3,114,057	+		LRK53_RS14185	0.65	+0.0
3,114,057	+		LRK53_RS14185	0.65	-0.9
3,114,057	+		LRK53_RS14185	0.65	+0.4
3,114,057	+		LRK53_RS14185	0.65	+0.0
3,114,058	-		LRK53_RS14185	0.66	+0.7
3,114,058	-		LRK53_RS14185	0.66	-0.1
3,114,058	-		LRK53_RS14185	0.66	-0.3
3,114,058	-		LRK53_RS14185	0.66	+0.9
3,114,058	-		LRK53_RS14185	0.66	+0.0
3,114,058	-		LRK53_RS14185	0.66	-0.5
3,114,058	-		LRK53_RS14185	0.66	-0.9
3,114,058	-		LRK53_RS14185	0.66	+0.8
3,114,058	-		LRK53_RS14185	0.66	-0.1
3,114,110	+				-1.0
3,114,150	+				+0.8
3,114,150	+				-1.3
3,114,151	-				-0.5
3,114,243	+				+0.6
3,114,243	+				+0.3
3,114,243	+				+0.9
3,114,243	+				+2.0
3,114,243	+				+1.6
3,114,244	-				+1.3
3,114,244	-				+0.0
3,114,244	-				-0.1
3,114,244	-				-2.9
3,114,244	-				-1.0
3,114,244	-				+1.0
3,114,244	-				-1.5
3,114,244	-				+1.8
3,114,479	-		LRK53_RS14190	0.62	+1.5
3,114,582	+		LRK53_RS14190	0.88	-1.0
3,114,582	+		LRK53_RS14190	0.88	+1.7
3,114,582	+		LRK53_RS14190	0.88	-1.4
3,114,583	-		LRK53_RS14190	0.88	-0.8
3,114,583	-		LRK53_RS14190	0.88	+0.4
3,114,629	+				-1.5
3,114,832	-		LRK53_RS14195	0.12	-0.6
3,114,841	+		LRK53_RS14195	0.13	+0.0
3,114,841	+		LRK53_RS14195	0.13	+3.0
3,114,841	+		LRK53_RS14195	0.13	-1.6
3,114,841	+		LRK53_RS14195	0.13	+1.1
3,114,841	+		LRK53_RS14195	0.13	-0.9
3,114,841	+		LRK53_RS14195	0.13	+0.6
3,114,841	+		LRK53_RS14195	0.13	-1.3
3,114,841	+		LRK53_RS14195	0.13	+1.6
3,114,841	+		LRK53_RS14195	0.13	+0.2
3,114,841	+		LRK53_RS14195	0.13	-0.8
3,114,841	+		LRK53_RS14195	0.13	-0.8
3,114,842	-		LRK53_RS14195	0.13	-0.1
3,114,842	-		LRK53_RS14195	0.13	-0.9
3,114,842	-		LRK53_RS14195	0.13	-0.7
3,114,842	-		LRK53_RS14195	0.13	-0.7
3,114,842	-		LRK53_RS14195	0.13	-1.6
3,114,931	+		LRK53_RS14195	0.23	+0.0
3,114,931	+		LRK53_RS14195	0.23	-0.6
3,114,931	+		LRK53_RS14195	0.23	+0.7
3,114,931	+		LRK53_RS14195	0.23	-0.3
3,114,931	+		LRK53_RS14195	0.23	-0.4
3,114,931	+		LRK53_RS14195	0.23	+1.9
3,114,931	+		LRK53_RS14195	0.23	+0.0
3,114,931	+		LRK53_RS14195	0.23	+0.3
3,114,931	+		LRK53_RS14195	0.23	-0.9
3,114,931	+		LRK53_RS14195	0.23	-1.4
3,114,931	+		LRK53_RS14195	0.23	+1.0
3,114,931	+		LRK53_RS14195	0.23	+0.7
3,114,931	+		LRK53_RS14195	0.23	+0.2
3,114,931	+		LRK53_RS14195	0.23	-1.1
3,114,932	-		LRK53_RS14195	0.23	+0.4
3,114,932	-		LRK53_RS14195	0.23	+0.2
3,114,932	-		LRK53_RS14195	0.23	+0.6
3,114,932	-		LRK53_RS14195	0.23	+0.9
3,114,932	-		LRK53_RS14195	0.23	-2.0
3,114,932	-		LRK53_RS14195	0.23	-0.2
3,114,932	-		LRK53_RS14195	0.23	-1.2
3,114,932	-		LRK53_RS14195	0.23	-1.0
3,114,932	-		LRK53_RS14195	0.23	-0.2
3,114,932	-		LRK53_RS14195	0.23	-2.2
3,115,432	+		LRK53_RS14195	0.81	-0.9
3,115,432	+		LRK53_RS14195	0.81	+0.4
3,115,432	+		LRK53_RS14195	0.81	-1.0
3,115,432	+		LRK53_RS14195	0.81	-1.4
3,115,433	-		LRK53_RS14195	0.81	-1.1
3,115,433	-		LRK53_RS14195	0.81	-1.1
3,115,433	-		LRK53_RS14195	0.81	-0.1
3,115,433	-		LRK53_RS14195	0.81	-1.3
3,115,448	+		LRK53_RS14195	0.83	+0.0
3,115,448	+		LRK53_RS14195	0.83	-0.4
3,115,448	+		LRK53_RS14195	0.83	-1.5
3,115,448	+		LRK53_RS14195	0.83	-1.4
3,115,449	-		LRK53_RS14195	0.83	+0.6
3,115,449	-		LRK53_RS14195	0.83	+0.0
3,115,598	-				-1.3
3,115,598	-				-0.3
3,115,598	-				-0.1
3,115,598	-				-3.5
3,115,598	-				-0.2
3,115,598	-				+0.8
3,115,598	-				+0.3
3,115,598	-				-0.5
3,115,608	+				+1.7
3,115,608	+				+0.7
3,115,609	-				+0.0
3,115,609	-				-0.2
3,115,609	-				+0.7