Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS09930

Experiment: Biofilm; Day2; SGW; pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm; Day2; SGW; pH7
2,230,012	+				+0.3
2,230,012	+				+0.4
2,230,012	+				+1.1
2,230,013	-				+0.8
2,230,013	-				+0.1
2,230,013	-				+1.1
2,230,015	+				+0.4
2,230,015	+				-2.3
2,230,015	+				-0.4
2,230,015	+				+0.2
2,230,015	+				+0.4
2,230,015	+				-2.0
2,230,015	+				-1.4
2,230,015	+				+0.5
2,230,015	+				-0.3
2,230,015	+				-0.4
2,230,015	+				+0.1
2,230,015	+				-0.1
2,230,015	+				+1.2
2,230,015	+				-1.0
2,230,015	+				-0.9
2,230,016	-				-1.9
2,230,016	-				-0.7
2,230,016	-				-0.1
2,230,016	-				+2.3
2,230,016	-				+0.4
2,230,016	-				+0.8
2,230,016	-				-1.5
2,230,016	-				-0.1
2,230,016	-				-1.1
2,230,016	-				+1.5
2,230,016	-				-1.0
2,230,016	-				-0.1
2,230,016	-				+1.9
2,230,016	-				-1.1
2,230,016	-				-1.4
2,230,016	-				-1.4
2,230,016	-				-2.4
2,230,016	-				-0.9
2,230,016	-				-1.7
2,230,039	-				-1.9
2,230,504	-		LRK53_RS09925	0.71	-0.0
2,230,504	-		LRK53_RS09925	0.71	-0.1
2,230,542	+		LRK53_RS09925	0.80	-2.2
2,230,542	+		LRK53_RS09925	0.80	-2.1
2,230,542	+		LRK53_RS09925	0.80	+1.6
2,230,542	+		LRK53_RS09925	0.80	-0.6
2,230,542	+		LRK53_RS09925	0.80	+0.4
2,230,543	-		LRK53_RS09925	0.80	+2.8
2,230,543	-		LRK53_RS09925	0.80	+2.0
2,230,698	-				-0.8
2,230,791	-				-1.2
2,230,791	-				-0.0
2,230,815	+				-1.4
2,230,815	+				-2.6
2,230,815	+				+0.3
2,230,815	+				+0.1
2,230,816	-				-0.4
2,230,816	-				-1.9
2,230,854	+				-1.6
2,230,854	+				-2.5
2,230,854	+				-0.4
2,230,854	+				-0.1
2,230,854	+				-0.3
2,230,854	+				-0.3
2,230,854	+				-0.9
2,230,855	-				+0.6
2,230,855	-				-0.9
2,230,855	-				+1.6
2,230,855	-				-1.9
2,230,855	-				+1.2
2,230,855	-				-0.9
2,230,855	-				-2.3
2,230,855	-				-1.9
2,230,855	-				-0.9
2,230,855	-				-1.1
2,230,855	-				-1.4
2,230,855	-				-1.9
2,230,883	+				-0.3
2,230,883	+				+0.1
2,230,884	-				-0.7
2,231,002	+		LRK53_RS09930	0.42	-1.1
2,231,002	+		LRK53_RS09930	0.42	+0.4
2,231,002	+		LRK53_RS09930	0.42	-0.9
2,231,125	+		LRK53_RS09930	0.77	-0.3
2,231,125	+		LRK53_RS09930	0.77	-1.2
2,231,125	+		LRK53_RS09930	0.77	-0.1
2,231,125	+		LRK53_RS09930	0.77	-0.2
2,231,125	+		LRK53_RS09930	0.77	-1.3
2,231,125	+		LRK53_RS09930	0.77	-2.6
2,231,125	+		LRK53_RS09930	0.77	-0.7
2,231,125	+		LRK53_RS09930	0.77	-0.6
2,231,125	+		LRK53_RS09930	0.77	-2.3
2,231,125	+		LRK53_RS09930	0.77	-1.4
2,231,125	+		LRK53_RS09930	0.77	-1.5
2,231,126	-		LRK53_RS09930	0.77	-1.9
2,231,126	-		LRK53_RS09930	0.77	-2.1
2,231,126	-		LRK53_RS09930	0.77	+1.6
2,231,126	-		LRK53_RS09930	0.77	-0.1
2,231,126	-		LRK53_RS09930	0.77	-1.7
2,231,126	-		LRK53_RS09930	0.77	+2.1
2,231,126	-		LRK53_RS09930	0.77	-0.8
2,231,126	-		LRK53_RS09930	0.77	-1.6
2,231,182	+				-0.5
2,231,183	-				+0.8
2,231,183	-				-0.6
2,231,201	-				-0.6
2,231,359	-		LRK53_RS09935	0.51	+0.1
2,231,359	-		LRK53_RS09935	0.51	-0.5
2,231,410	+		LRK53_RS09935	0.69	-0.7
2,231,411	-		LRK53_RS09935	0.70	+0.6
2,231,455	+		LRK53_RS09935	0.86	-0.5
2,231,456	-		LRK53_RS09935	0.86	-0.4
2,231,484	+				-1.2
2,231,492	+				+0.3
2,231,493	-				-0.7
2,231,493	-				-0.8
2,231,493	-				-0.8
2,231,493	-				+0.2
2,231,493	-				+0.1
2,231,493	-				-1.2
2,231,493	-				+1.1
2,231,493	-				+0.5
2,231,520	+				+0.3
2,231,520	+				+0.1
2,231,520	+				-2.0
2,231,520	+				+2.0
2,231,521	-				-0.6
2,231,521	-				+3.1
2,231,630	+		LRK53_RS09940	0.54	-1.0
2,231,630	+		LRK53_RS09940	0.54	+0.5
2,231,630	+		LRK53_RS09940	0.54	-0.9
2,231,630	+		LRK53_RS09940	0.54	-1.1
2,231,630	+		LRK53_RS09940	0.54	-1.2
2,231,630	+		LRK53_RS09940	0.54	-1.1
2,231,630	+		LRK53_RS09940	0.54	-1.1
2,231,630	+		LRK53_RS09940	0.54	-0.6
2,231,630	+		LRK53_RS09940	0.54	-2.9
2,231,630	+		LRK53_RS09940	0.54	+0.1
2,231,630	+		LRK53_RS09940	0.54	+0.1
2,231,630	+		LRK53_RS09940	0.54	+0.0
2,231,630	+		LRK53_RS09940	0.54	-2.4
2,231,630	+		LRK53_RS09940	0.54	-2.0
2,231,630	+		LRK53_RS09940	0.54	-1.9
2,231,630	+		LRK53_RS09940	0.54	+0.5
2,231,630	+		LRK53_RS09940	0.54	+0.2
2,231,631	-		LRK53_RS09940	0.55	+0.9
2,231,631	-		LRK53_RS09940	0.55	+0.0
2,231,631	-		LRK53_RS09940	0.55	-0.9
2,231,631	-		LRK53_RS09940	0.55	+1.1
2,231,631	-		LRK53_RS09940	0.55	-0.9
2,231,631	-		LRK53_RS09940	0.55	+0.2
2,231,631	-		LRK53_RS09940	0.55	-1.7
2,231,631	-		LRK53_RS09940	0.55	-1.1
2,231,631	-		LRK53_RS09940	0.55	-0.3
2,231,631	-		LRK53_RS09940	0.55	+0.2
2,231,655	+		LRK53_RS09940	0.65	-1.7
2,231,655	+		LRK53_RS09940	0.65	-0.6
2,231,655	+		LRK53_RS09940	0.65	+0.3
2,231,655	+		LRK53_RS09940	0.65	+0.4
2,231,656	-		LRK53_RS09940	0.65	-0.3
2,231,656	-		LRK53_RS09940	0.65	-1.1
2,231,656	-		LRK53_RS09940	0.65	+0.3
2,231,656	-		LRK53_RS09940	0.65	-0.7
2,231,656	-		LRK53_RS09940	0.65	-2.0
2,231,675	+		LRK53_RS09940	0.73	-1.6
2,231,675	+		LRK53_RS09940	0.73	-1.3
2,231,675	+		LRK53_RS09940	0.73	+0.1
2,231,675	+		LRK53_RS09940	0.73	-0.4
2,231,676	-		LRK53_RS09940	0.73	+0.0
2,231,676	-		LRK53_RS09940	0.73	-2.3
2,231,676	-		LRK53_RS09940	0.73	-2.2
2,231,676	-		LRK53_RS09940	0.73	-0.0
2,231,676	-		LRK53_RS09940	0.73	+0.1
2,231,676	-		LRK53_RS09940	0.73	+0.3
2,231,765	+				+1.3
2,231,765	+				-1.2
2,231,765	+				-0.4
2,231,765	+				-0.2
2,231,766	-				+0.0
2,231,766	-				-0.2
2,231,766	-				+1.4
2,231,766	-				+0.2
2,231,857	+				-1.2
2,231,858	-				+1.0
2,231,858	-				+0.3
2,231,875	-				-1.4
2,231,884	+				-0.5
2,231,884	+				+0.9
2,231,884	+				+0.3
2,231,884	+				-0.4
2,231,884	+				-1.6
2,231,884	+				-1.1
2,231,885	-				+0.1
2,231,885	-				-2.6
2,231,885	-				-2.4
2,231,885	-				+1.5
2,231,885	-				-0.8
2,231,997	+				-1.8
2,232,017	+				-1.3
2,232,018	-				-1.0
2,232,018	-				-0.1
2,232,075	+		LRK53_RS09945	0.11	-0.8
2,232,075	+		LRK53_RS09945	0.11	-0.6
2,232,075	+		LRK53_RS09945	0.11	-0.1
2,232,075	+		LRK53_RS09945	0.11	-0.7
2,232,075	+		LRK53_RS09945	0.11	-0.8
2,232,075	+		LRK53_RS09945	0.11	+1.4
2,232,075	+		LRK53_RS09945	0.11	-1.6
2,232,075	+		LRK53_RS09945	0.11	+1.2
2,232,076	-		LRK53_RS09945	0.11	-1.3
2,232,076	-		LRK53_RS09945	0.11	-0.4
2,232,076	-		LRK53_RS09945	0.11	-0.5
2,232,076	-		LRK53_RS09945	0.11	-1.8
2,232,103	-		LRK53_RS09945	0.12	-0.4
2,232,111	-		LRK53_RS09945	0.13	+1.4