Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS06990

Experiment: Biofilm; Day2; SGW; pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm; Day2; SGW; pH7
1,573,798	+		LRK53_RS06985	0.33	-0.1
1,573,798	+		LRK53_RS06985	0.33	-1.6
1,573,798	+		LRK53_RS06985	0.33	+0.1
1,573,799	-		LRK53_RS06985	0.33	+0.5
1,573,799	-		LRK53_RS06985	0.33	-2.9
1,573,799	-		LRK53_RS06985	0.33	-0.8
1,574,003	+		LRK53_RS06985	0.54	-0.0
1,574,003	+		LRK53_RS06985	0.54	+0.4
1,574,003	+		LRK53_RS06985	0.54	-0.6
1,574,003	+		LRK53_RS06985	0.54	-0.4
1,574,003	+		LRK53_RS06985	0.54	+0.5
1,574,003	+		LRK53_RS06985	0.54	-0.6
1,574,004	-		LRK53_RS06985	0.54	+0.4
1,574,004	-		LRK53_RS06985	0.54	+0.6
1,574,004	-		LRK53_RS06985	0.54	+0.1
1,574,102	+		LRK53_RS06985	0.64	-0.3
1,574,102	+		LRK53_RS06985	0.64	-0.7
1,574,102	+		LRK53_RS06985	0.64	-0.5
1,574,102	+		LRK53_RS06985	0.64	+0.5
1,574,102	+		LRK53_RS06985	0.64	-1.1
1,574,102	+		LRK53_RS06985	0.64	+2.5
1,574,102	+		LRK53_RS06985	0.64	+2.1
1,574,103	-		LRK53_RS06985	0.64	-0.3
1,574,103	-		LRK53_RS06985	0.64	-0.2
1,574,103	-		LRK53_RS06985	0.64	-0.7
1,574,264	+		LRK53_RS06985	0.81	-1.4
1,574,265	-		LRK53_RS06985	0.81	+0.1
1,574,265	-		LRK53_RS06985	0.81	+1.8
1,574,267	+		LRK53_RS06985	0.81	-2.7
1,574,267	+		LRK53_RS06985	0.81	-3.5
1,574,267	+		LRK53_RS06985	0.81	+1.0
1,574,267	+		LRK53_RS06985	0.81	-2.3
1,574,267	+		LRK53_RS06985	0.81	+0.6
1,574,267	+		LRK53_RS06985	0.81	+0.2
1,574,267	+		LRK53_RS06985	0.81	+0.2
1,574,268	-		LRK53_RS06985	0.82	-0.3
1,574,268	-		LRK53_RS06985	0.82	+1.5
1,574,268	-		LRK53_RS06985	0.82	-1.1
1,574,268	-		LRK53_RS06985	0.82	-1.7
1,574,268	-		LRK53_RS06985	0.82	-0.5
1,574,268	-		LRK53_RS06985	0.82	-1.6
1,574,351	+				-3.0
1,574,352	-				-0.2
1,574,384	+				-0.1
1,574,384	+				+0.3
1,574,384	+				+0.6
1,574,385	-				+0.1
1,574,463	+				-0.9
1,574,463	+				+0.2
1,574,463	+				-0.2
1,574,463	+				-0.6
1,574,464	-				-0.3
1,574,464	-				-1.3
1,574,464	-				+0.3
1,574,464	-				+0.2
1,574,464	-				-0.2
1,574,464	-				-0.4
1,574,557	+				-0.7
1,574,558	-				-0.3
1,574,558	-				+0.9
1,574,627	+				+0.1
1,574,627	+				-1.5
1,574,632	+				-0.2
1,574,632	+				-0.8
1,574,633	-				-0.8
1,574,637	-				-0.5
1,574,637	-				+1.1
1,574,637	-				-1.0
1,574,660	-				-0.3
1,574,666	-				-2.5
1,574,666	-				-0.8
1,574,666	-				-1.9
1,574,684	+				+1.3
1,574,685	-				-1.5
1,574,759	-				-2.2
1,574,763	-				+2.3
1,574,786	+				-2.1
1,574,786	+				-0.1
1,574,786	+				+1.5
1,574,787	-				-1.9
1,574,787	-				-0.5
1,574,787	-				-0.9
1,574,787	-				+1.5
1,574,790	+				-0.3
1,574,790	+				-1.0
1,574,790	+				+1.9
1,574,790	+				+0.2
1,574,790	+				-1.4
1,574,790	+				+0.9
1,574,790	+				-0.7
1,574,790	+				-1.9
1,574,790	+				+0.5
1,574,791	-				-0.9
1,574,791	-				-1.4
1,574,791	-				-1.0
1,574,791	-				+0.1
1,574,791	-				-0.5
1,574,791	-				-2.1
1,574,791	-				-2.1
1,574,791	-				-1.0
1,574,791	-				-0.3
1,574,791	-				-1.7
1,574,791	-				+2.0
1,574,791	-				-0.9
1,574,791	-				-1.0
1,574,791	-				+0.1
1,574,880	+		LRK53_RS06990	0.33	-2.6
1,574,880	+		LRK53_RS06990	0.33	+0.4
1,574,880	+		LRK53_RS06990	0.33	+1.1
1,574,880	+		LRK53_RS06990	0.33	+0.3
1,574,880	+		LRK53_RS06990	0.33	+0.2
1,574,881	-		LRK53_RS06990	0.33	-1.2
1,574,881	-		LRK53_RS06990	0.33	+0.6
1,574,894	-		LRK53_RS06990	0.38	-0.3
1,575,007	+		LRK53_RS06990	0.80	+0.9
1,575,010	+		LRK53_RS06990	0.81	-0.5
1,575,011	-		LRK53_RS06990	0.81	+1.5
1,575,058	+				+0.8
1,575,058	+				-0.7
1,575,058	+				-1.1
1,575,058	+				-0.3
1,575,058	+				-0.7
1,575,058	+				-0.7
1,575,058	+				-2.1
1,575,059	-				+1.3
1,575,059	-				-1.5
1,575,059	-				-1.4
1,575,059	-				-1.1
1,575,059	-				+0.8
1,575,059	-				-1.2
1,575,072	+				+0.9
1,575,073	-				-0.5
1,575,073	-				+0.1
1,575,073	-				-2.5
1,575,073	-				-0.5
1,575,126	+				+0.2
1,575,127	-				+0.2
1,575,162	+				-0.1
1,575,162	+				-0.5
1,575,162	+				+0.2
1,575,162	+				-2.2
1,575,162	+				-0.7
1,575,162	+				+0.9
1,575,162	+				-0.8
1,575,162	+				-0.3
1,575,162	+				-1.6
1,575,162	+				+0.4
1,575,162	+				-1.6
1,575,162	+				-0.7
1,575,162	+				-1.8
1,575,162	+				-2.3
1,575,162	+				-0.1
1,575,163	-				+0.2
1,575,163	-				-0.4
1,575,163	-				+0.6
1,575,163	-				-1.1
1,575,163	-				-0.1
1,575,163	-				-0.1
1,575,163	-				-0.8
1,575,163	-				-0.1
1,575,167	+				-2.9
1,575,167	+				+2.5
1,575,255	-		LRK53_RS06995	0.10	-1.7
1,575,266	+		LRK53_RS06995	0.11	-0.2
1,575,284	+		LRK53_RS06995	0.12	+1.8
1,575,285	-		LRK53_RS06995	0.12	+1.2
1,575,290	+		LRK53_RS06995	0.12	-0.3
1,575,290	+		LRK53_RS06995	0.12	-0.9
1,575,290	+		LRK53_RS06995	0.12	-2.0
1,575,290	+		LRK53_RS06995	0.12	-0.4
1,575,290	+		LRK53_RS06995	0.12	+1.7
1,575,290	+		LRK53_RS06995	0.12	-0.6
1,575,290	+		LRK53_RS06995	0.12	+1.0
1,575,291	-		LRK53_RS06995	0.12	+0.4
1,575,291	-		LRK53_RS06995	0.12	-0.6
1,575,291	-		LRK53_RS06995	0.12	+0.2
1,575,291	-		LRK53_RS06995	0.12	-0.7
1,575,291	-		LRK53_RS06995	0.12	-0.7
1,575,413	+		LRK53_RS06995	0.20	-1.8
1,575,413	+		LRK53_RS06995	0.20	-2.1
1,575,414	-		LRK53_RS06995	0.20	+0.5
1,575,414	-		LRK53_RS06995	0.20	+0.3
1,575,812	+		LRK53_RS06995	0.43	-2.1
1,575,812	+		LRK53_RS06995	0.43	-0.7
1,575,813	-		LRK53_RS06995	0.43	-0.1
1,575,813	-		LRK53_RS06995	0.43	+1.0
1,575,813	-		LRK53_RS06995	0.43	-1.4
1,575,813	-		LRK53_RS06995	0.43	-1.1
1,575,974	+		LRK53_RS06995	0.53	-2.8
1,575,974	+		LRK53_RS06995	0.53	-0.8
1,575,974	+		LRK53_RS06995	0.53	-1.1
1,575,974	+		LRK53_RS06995	0.53	+1.8
1,575,974	+		LRK53_RS06995	0.53	-1.2
1,575,974	+		LRK53_RS06995	0.53	+1.7
1,575,974	+		LRK53_RS06995	0.53	+0.9
1,575,974	+		LRK53_RS06995	0.53	-1.2
1,575,974	+		LRK53_RS06995	0.53	+0.1
1,575,975	-		LRK53_RS06995	0.53	-0.8
1,575,975	-		LRK53_RS06995	0.53	-0.9
1,575,975	-		LRK53_RS06995	0.53	+0.5
1,576,053	-		LRK53_RS06995	0.58	-0.8