Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05850

Experiment: Biofilm; Day2; SGW; pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm; Day2; SGW; pH7
1,356,519	+		LRK53_RS05845	0.87	-1.1
1,356,519	+		LRK53_RS05845	0.87	-2.5
1,356,519	+		LRK53_RS05845	0.87	+0.3
1,356,519	+		LRK53_RS05845	0.87	-0.4
1,356,519	+		LRK53_RS05845	0.87	-0.8
1,356,519	+		LRK53_RS05845	0.87	-1.6
1,356,519	+		LRK53_RS05845	0.87	-1.6
1,356,519	+		LRK53_RS05845	0.87	-0.6
1,356,519	+		LRK53_RS05845	0.87	-0.7
1,356,519	+		LRK53_RS05845	0.87	-0.8
1,356,519	+		LRK53_RS05845	0.87	+0.4
1,356,519	+		LRK53_RS05845	0.87	-0.6
1,356,519	+		LRK53_RS05845	0.87	+0.1
1,356,519	+		LRK53_RS05845	0.87	-1.2
1,356,519	+		LRK53_RS05845	0.87	-0.2
1,356,519	+		LRK53_RS05845	0.87	-1.6
1,356,519	+		LRK53_RS05845	0.87	-2.8
1,356,519	+		LRK53_RS05845	0.87	-1.4
1,356,519	+		LRK53_RS05845	0.87	-1.6
1,356,519	+		LRK53_RS05845	0.87	-1.2
1,356,519	+		LRK53_RS05845	0.87	-0.6
1,356,519	+		LRK53_RS05845	0.87	-1.5
1,356,519	+		LRK53_RS05845	0.87	-0.9
1,356,519	+		LRK53_RS05845	0.87	-0.6
1,356,519	+		LRK53_RS05845	0.87	+0.8
1,356,519	+		LRK53_RS05845	0.87	+0.1
1,356,519	+		LRK53_RS05845	0.87	+0.6
1,356,520	-		LRK53_RS05845	0.87	-1.9
1,356,520	-		LRK53_RS05845	0.87	-0.1
1,356,520	-		LRK53_RS05845	0.87	-1.4
1,356,520	-		LRK53_RS05845	0.87	-0.9
1,356,520	-		LRK53_RS05845	0.87	+0.1
1,356,520	-		LRK53_RS05845	0.87	-2.7
1,356,520	-		LRK53_RS05845	0.87	-0.2
1,356,520	-		LRK53_RS05845	0.87	-1.7
1,356,520	-		LRK53_RS05845	0.87	+0.1
1,356,520	-		LRK53_RS05845	0.87	-0.2
1,356,520	-		LRK53_RS05845	0.87	-0.9
1,356,520	-		LRK53_RS05845	0.87	-0.6
1,356,520	-		LRK53_RS05845	0.87	-0.5
1,356,520	-		LRK53_RS05845	0.87	-0.4
1,356,520	-		LRK53_RS05845	0.87	-1.2
1,356,520	-		LRK53_RS05845	0.87	+1.1
1,356,520	-		LRK53_RS05845	0.87	-0.7
1,356,520	-		LRK53_RS05845	0.87	-1.5
1,356,520	-		LRK53_RS05845	0.87	+0.8
1,356,520	-		LRK53_RS05845	0.87	+0.9
1,356,520	-		LRK53_RS05845	0.87	-2.2
1,356,520	-		LRK53_RS05845	0.87	-0.7
1,356,520	-		LRK53_RS05845	0.87	-0.5
1,356,520	-		LRK53_RS05845	0.87	-1.7
1,356,520	-		LRK53_RS05845	0.87	-1.3
1,356,561	+				-0.2
1,356,561	+				+0.1
1,356,561	+				-1.6
1,356,562	-				-1.3
1,356,562	-				-0.3
1,356,562	-				-1.9
1,356,672	+				-2.0
1,356,672	+				-1.1
1,356,672	+				+0.4
1,356,673	-				-0.6
1,356,673	-				-0.1
1,356,673	-				-1.3
1,356,673	-				-0.9
1,356,702	+				-1.1
1,356,702	+				-1.1
1,356,702	+				+1.0
1,356,702	+				-0.7
1,356,702	+				-2.7
1,356,702	+				+1.1
1,356,702	+				-1.1
1,356,702	+				-0.8
1,356,702	+				+0.2
1,356,703	-				-1.1
1,356,703	-				+0.2
1,356,703	-				-1.2
1,356,703	-				-1.9
1,356,703	-				-1.8
1,356,703	-				-0.4
1,356,703	-				+0.0
1,356,703	-				-1.3
1,356,703	-				-1.8
1,356,703	-				-0.3
1,356,703	-				-1.8
1,356,703	-				-1.2
1,356,703	-				-1.3
1,356,703	-				+1.3
1,356,703	-				-2.7
1,356,906	+		LRK53_RS05850	0.31	-0.5
1,356,906	+		LRK53_RS05850	0.31	-2.4
1,356,906	+		LRK53_RS05850	0.31	-0.9
1,356,906	+		LRK53_RS05850	0.31	-0.7
1,356,906	+		LRK53_RS05850	0.31	-2.1
1,356,906	+		LRK53_RS05850	0.31	-0.6
1,356,906	+		LRK53_RS05850	0.31	-1.1
1,356,906	+		LRK53_RS05850	0.31	+0.2
1,356,906	+		LRK53_RS05850	0.31	-0.8
1,356,906	+		LRK53_RS05850	0.31	-1.1
1,356,906	+		LRK53_RS05850	0.31	+0.4
1,356,906	+		LRK53_RS05850	0.31	+0.5
1,356,906	+		LRK53_RS05850	0.31	-0.9
1,356,906	+		LRK53_RS05850	0.31	-1.8
1,356,907	-		LRK53_RS05850	0.31	+1.8
1,356,907	-		LRK53_RS05850	0.31	-0.5
1,356,907	-		LRK53_RS05850	0.31	+0.6
1,356,907	-		LRK53_RS05850	0.31	-0.5
1,356,907	-		LRK53_RS05850	0.31	-0.5
1,356,907	-		LRK53_RS05850	0.31	+0.6
1,356,907	-		LRK53_RS05850	0.31	-0.9
1,356,907	-		LRK53_RS05850	0.31	-2.1
1,356,907	-		LRK53_RS05850	0.31	-2.8
1,356,907	-		LRK53_RS05850	0.31	+0.7
1,356,907	-		LRK53_RS05850	0.31	-0.9
1,356,907	-		LRK53_RS05850	0.31	+0.4
1,356,907	-		LRK53_RS05850	0.31	+3.0
1,356,907	-		LRK53_RS05850	0.31	-0.2
1,356,907	-		LRK53_RS05850	0.31	-1.3
1,356,976	-		LRK53_RS05850	0.44	+0.8
1,356,976	-		LRK53_RS05850	0.44	+0.4
1,356,976	-		LRK53_RS05850	0.44	-0.1
1,357,098	+		LRK53_RS05850	0.67	+0.0
1,357,098	+		LRK53_RS05850	0.67	+0.8
1,357,098	+		LRK53_RS05850	0.67	-2.0
1,357,098	+		LRK53_RS05850	0.67	-0.9
1,357,098	+		LRK53_RS05850	0.67	+1.7
1,357,098	+		LRK53_RS05850	0.67	-1.1
1,357,098	+		LRK53_RS05850	0.67	-2.1
1,357,098	+		LRK53_RS05850	0.67	+0.9
1,357,098	+		LRK53_RS05850	0.67	-0.0
1,357,098	+		LRK53_RS05850	0.67	-0.3
1,357,098	+		LRK53_RS05850	0.67	-0.9
1,357,099	-		LRK53_RS05850	0.67	-1.8
1,357,099	-		LRK53_RS05850	0.67	+1.6
1,357,099	-		LRK53_RS05850	0.67	-0.0
1,357,099	-		LRK53_RS05850	0.67	+0.3
1,357,099	-		LRK53_RS05850	0.67	-0.6
1,357,099	-		LRK53_RS05850	0.67	-1.9
1,357,099	-		LRK53_RS05850	0.67	-1.1
1,357,099	-		LRK53_RS05850	0.67	-1.7
1,357,107	+		LRK53_RS05850	0.69	-0.4
1,357,107	+		LRK53_RS05850	0.69	+1.6
1,357,107	+		LRK53_RS05850	0.69	+1.7
1,357,107	+		LRK53_RS05850	0.69	-0.1
1,357,107	+		LRK53_RS05850	0.69	-0.4
1,357,107	+		LRK53_RS05850	0.69	+1.2
1,357,107	+		LRK53_RS05850	0.69	-0.9
1,357,107	+		LRK53_RS05850	0.69	-0.5
1,357,107	+		LRK53_RS05850	0.69	-0.1
1,357,108	-		LRK53_RS05850	0.69	-0.7
1,357,108	-		LRK53_RS05850	0.69	-0.7
1,357,108	-		LRK53_RS05850	0.69	+1.0
1,357,108	-		LRK53_RS05850	0.69	-0.7
1,357,108	-		LRK53_RS05850	0.69	-3.6
1,357,108	-		LRK53_RS05850	0.69	-0.3
1,357,108	-		LRK53_RS05850	0.69	+0.3
1,357,108	-		LRK53_RS05850	0.69	-0.7
1,357,317	+				+0.4
1,357,318	-				-0.6
1,357,318	-				-1.8
1,357,369	+				-0.4
1,357,369	+				+1.5
1,357,370	-				+0.9
1,357,370	-				+0.1
1,357,370	-				-1.2
1,357,397	+				-0.1
1,357,397	+				-0.8
1,357,397	+				-1.8
1,357,397	+				+0.3
1,357,397	+				-1.3
1,357,397	+				+1.2
1,357,397	+				+1.1
1,357,397	+				-0.2
1,357,397	+				-1.1
1,357,397	+				-0.3
1,357,397	+				+0.6
1,357,397	+				-1.1
1,357,397	+				+0.1
1,357,397	+				-0.3
1,357,397	+				-1.3
1,357,397	+				+0.2
1,357,397	+				-1.0
1,357,397	+				-0.4
1,357,397	+				-0.9
1,357,397	+				+1.1
1,357,398	-				-1.1
1,357,398	-				-0.9
1,357,398	-				-0.1
1,357,398	-				+1.0
1,357,398	-				+0.7
1,357,398	-				-1.1
1,357,398	-				+1.9
1,357,398	-				-1.5
1,357,398	-				-0.8
1,357,398	-				-0.4
1,357,398	-				-0.6
1,357,398	-				-1.6
1,357,398	-				-0.3
1,357,398	-				-1.6
1,357,398	-				-0.8
1,357,398	-				-0.4
1,357,453	+				-0.6
1,357,700	-				-1.5
1,357,700	-				+0.3
1,357,700	-				+1.3
1,357,714	+				-1.1
1,357,714	+				+0.5
1,357,714	+				+0.8
1,357,714	+				-2.3
1,357,714	+				-0.7
1,357,714	+				-1.4
1,357,714	+				-0.9
1,357,714	+				-0.6
1,357,714	+				-0.4
1,357,714	+				-1.0
1,357,714	+				-0.3
1,357,714	+				-0.8
1,357,714	+				-1.5
1,357,714	+				-0.9
1,357,714	+				-0.6
1,357,714	+				-1.0
1,357,715	-				-0.7
1,357,715	-				-0.9
1,357,715	-				-0.8
1,357,715	-				+0.1
1,357,715	-				+2.9
1,357,715	-				-0.3
1,357,715	-				-0.5
1,357,715	-				-0.4
1,357,715	-				-0.0
1,357,715	-				+0.0
1,357,715	-				-1.0
1,357,715	-				+0.4
1,357,715	-				-1.5
1,357,715	-				-1.0
1,357,922	+		LRK53_RS05855	0.13	-0.6
1,357,922	+		LRK53_RS05855	0.13	-2.0
1,357,923	-		LRK53_RS05855	0.13	+0.2
1,358,159	+		LRK53_RS05855	0.36	+0.1
1,358,159	+		LRK53_RS05855	0.36	-0.7
1,358,159	+		LRK53_RS05855	0.36	-1.8
1,358,159	+		LRK53_RS05855	0.36	+0.2
1,358,159	+		LRK53_RS05855	0.36	-0.5
1,358,159	+		LRK53_RS05855	0.36	-0.6
1,358,160	-		LRK53_RS05855	0.37	-0.0
1,358,160	-		LRK53_RS05855	0.37	-0.6
1,358,231	+		LRK53_RS05855	0.44	-1.2
1,358,231	+		LRK53_RS05855	0.44	-1.2
1,358,231	+		LRK53_RS05855	0.44	-1.3
1,358,231	+		LRK53_RS05855	0.44	+0.6
1,358,231	+		LRK53_RS05855	0.44	-1.2
1,358,231	+		LRK53_RS05855	0.44	-1.1
1,358,231	+		LRK53_RS05855	0.44	+0.6
1,358,231	+		LRK53_RS05855	0.44	-1.8
1,358,231	+		LRK53_RS05855	0.44	-0.7
1,358,231	+		LRK53_RS05855	0.44	-0.0
1,358,231	+		LRK53_RS05855	0.44	+1.7
1,358,231	+		LRK53_RS05855	0.44	-1.5
1,358,232	-		LRK53_RS05855	0.44	+0.4
1,358,232	-		LRK53_RS05855	0.44	-0.1
1,358,232	-		LRK53_RS05855	0.44	-1.0
1,358,232	-		LRK53_RS05855	0.44	-0.6
1,358,232	-		LRK53_RS05855	0.44	-1.5
1,358,232	-		LRK53_RS05855	0.44	-0.2
1,358,232	-		LRK53_RS05855	0.44	-0.8
1,358,232	-		LRK53_RS05855	0.44	-0.5
1,358,232	-		LRK53_RS05855	0.44	+0.2
1,358,232	-		LRK53_RS05855	0.44	-0.5