Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05390

Experiment: Biofilm; Day2; SGW; pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm; Day2; SGW; pH7
1,256,787	+		LRK53_RS05385	0.56	+0.2
1,256,788	-		LRK53_RS05385	0.56	+0.5
1,256,860	-		LRK53_RS05385	0.60	+2.4
1,257,301	-		LRK53_RS05385	0.87	-0.5
1,257,502	-				+1.7
1,257,502	-				-0.1
1,257,502	-				-0.9
1,257,502	-				+1.4
1,257,507	+				+0.7
1,257,507	+				-0.3
1,257,508	-				-1.7
1,257,508	-				-0.8
1,257,508	-				+1.3
1,257,508	-				-0.1
1,257,508	-				-0.5
1,257,508	-				+0.4
1,257,508	-				-1.5
1,257,568	-				-0.5
1,257,594	-				+0.2
1,257,594	-				-1.8
1,257,594	-				-1.3
1,257,595	+				-0.5
1,257,596	-				-0.4
1,257,596	-				-1.1
1,257,596	-				-0.1
1,257,596	-				-2.0
1,257,668	+				+0.1
1,257,669	-				+0.2
1,257,669	-				+1.5
1,257,669	-				-1.3
1,257,669	-				-1.4
1,257,741	+				-0.5
1,257,822	+				-2.9
1,257,822	+				+0.2
1,257,822	+				+0.4
1,257,822	+				-0.6
1,257,822	+				+0.4
1,257,823	-				+0.6
1,257,823	-				+0.5
1,257,823	-				-2.9
1,257,823	-				-0.1
1,257,823	-				-2.1
1,257,823	-				+0.1
1,257,823	-				+1.9
1,257,823	-				-0.5
1,257,823	-				+1.4
1,257,823	-				-0.6
1,257,823	-				+1.8
1,257,823	-				-1.5
1,257,873	+		LRK53_RS05390	0.13	+1.7
1,257,873	+		LRK53_RS05390	0.13	+1.9
1,257,873	+		LRK53_RS05390	0.13	-0.0
1,257,873	+		LRK53_RS05390	0.13	-0.4
1,257,873	+		LRK53_RS05390	0.13	+0.4
1,257,873	+		LRK53_RS05390	0.13	-1.9
1,257,873	+		LRK53_RS05390	0.13	-0.3
1,257,873	+		LRK53_RS05390	0.13	+0.9
1,257,874	-		LRK53_RS05390	0.13	+0.1
1,257,874	-		LRK53_RS05390	0.13	-0.4
1,257,874	-		LRK53_RS05390	0.13	+0.1
1,257,874	-		LRK53_RS05390	0.13	+1.2
1,257,874	-		LRK53_RS05390	0.13	-0.9
1,257,874	-		LRK53_RS05390	0.13	+0.5
1,257,874	-		LRK53_RS05390	0.13	-1.2
1,257,874	-		LRK53_RS05390	0.13	+0.5
1,257,900	+		LRK53_RS05390	0.15	-1.0
1,257,900	+		LRK53_RS05390	0.15	+0.7
1,257,900	+		LRK53_RS05390	0.15	-1.6
1,257,900	+		LRK53_RS05390	0.15	-0.1
1,257,900	+		LRK53_RS05390	0.15	-0.8
1,257,901	-		LRK53_RS05390	0.15	-0.3
1,257,901	-		LRK53_RS05390	0.15	-0.3
1,257,901	-		LRK53_RS05390	0.15	+0.1
1,257,903	+		LRK53_RS05390	0.15	+1.4
1,257,903	+		LRK53_RS05390	0.15	+1.9
1,257,903	+		LRK53_RS05390	0.15	-2.0
1,257,904	-		LRK53_RS05390	0.15	-0.9
1,257,904	-		LRK53_RS05390	0.15	+2.5
1,257,904	-		LRK53_RS05390	0.15	+0.9
1,257,904	-		LRK53_RS05390	0.15	-1.6
1,257,918	+		LRK53_RS05390	0.17	-0.5
1,257,918	+		LRK53_RS05390	0.17	+0.5
1,257,918	+		LRK53_RS05390	0.17	-0.3
1,257,918	+		LRK53_RS05390	0.17	-3.4
1,257,918	+		LRK53_RS05390	0.17	+1.5
1,257,918	+		LRK53_RS05390	0.17	-0.8
1,257,918	+		LRK53_RS05390	0.17	+0.1
1,257,919	-		LRK53_RS05390	0.17	-1.1
1,257,978	+		LRK53_RS05390	0.21	+0.1
1,257,978	+		LRK53_RS05390	0.21	+0.4
1,257,979	-		LRK53_RS05390	0.21	-0.5
1,257,979	-		LRK53_RS05390	0.21	-0.1
1,258,026	+		LRK53_RS05390	0.25	+2.7
1,258,026	+		LRK53_RS05390	0.25	-0.8
1,258,026	+		LRK53_RS05390	0.25	-0.1
1,258,026	+		LRK53_RS05390	0.25	+0.0
1,258,026	+		LRK53_RS05390	0.25	-0.3
1,258,026	+		LRK53_RS05390	0.25	+0.1
1,258,026	+		LRK53_RS05390	0.25	-1.4
1,258,026	+		LRK53_RS05390	0.25	-0.6
1,258,026	+		LRK53_RS05390	0.25	+0.4
1,258,026	+		LRK53_RS05390	0.25	-0.8
1,258,027	-		LRK53_RS05390	0.25	+1.7
1,258,027	-		LRK53_RS05390	0.25	+0.9
1,258,027	-		LRK53_RS05390	0.25	+0.7
1,258,027	-		LRK53_RS05390	0.25	+0.4
1,258,027	-		LRK53_RS05390	0.25	-0.1
1,258,027	-		LRK53_RS05390	0.25	-2.0
1,258,027	-		LRK53_RS05390	0.25	-1.0
1,258,027	-		LRK53_RS05390	0.25	+0.2
1,258,027	-		LRK53_RS05390	0.25	-0.3
1,258,027	-		LRK53_RS05390	0.25	-0.1
1,258,027	-		LRK53_RS05390	0.25	-0.1
1,258,027	-		LRK53_RS05390	0.25	+0.4
1,258,027	-		LRK53_RS05390	0.25	-0.1
1,258,039	+		LRK53_RS05390	0.26	+0.3
1,258,039	+		LRK53_RS05390	0.26	+1.2
1,258,039	+		LRK53_RS05390	0.26	+0.1
1,258,039	+		LRK53_RS05390	0.26	-1.4
1,258,039	+		LRK53_RS05390	0.26	-0.8
1,258,040	-		LRK53_RS05390	0.26	-0.6
1,258,040	-		LRK53_RS05390	0.26	+0.0
1,258,040	-		LRK53_RS05390	0.26	-0.9
1,258,040	-		LRK53_RS05390	0.26	-0.8
1,258,040	-		LRK53_RS05390	0.26	+1.0
1,258,143	+		LRK53_RS05390	0.34	-1.1
1,258,143	+		LRK53_RS05390	0.34	+1.1
1,258,144	-		LRK53_RS05390	0.35	-0.1
1,258,174	-		LRK53_RS05390	0.37	-0.5
1,258,174	-		LRK53_RS05390	0.37	-0.1
1,258,174	-		LRK53_RS05390	0.37	-0.6
1,258,240	-		LRK53_RS05390	0.42	-0.8
1,258,477	+		LRK53_RS05390	0.61	+1.0
1,258,477	+		LRK53_RS05390	0.61	+2.3
1,258,477	+		LRK53_RS05390	0.61	-0.4
1,258,477	+		LRK53_RS05390	0.61	+0.9
1,258,477	+		LRK53_RS05390	0.61	+2.1
1,258,477	+		LRK53_RS05390	0.61	+0.5
1,258,477	+		LRK53_RS05390	0.61	-0.5
1,258,478	-		LRK53_RS05390	0.61	-0.1
1,258,478	-		LRK53_RS05390	0.61	+0.4
1,258,478	-		LRK53_RS05390	0.61	+1.9
1,258,569	+		LRK53_RS05390	0.68	+1.3
1,258,569	+		LRK53_RS05390	0.68	-0.1
1,258,569	+		LRK53_RS05390	0.68	+2.7
1,258,569	+		LRK53_RS05390	0.68	+1.1
1,258,569	+		LRK53_RS05390	0.68	+1.5
1,258,569	+		LRK53_RS05390	0.68	-0.2
1,258,570	-		LRK53_RS05390	0.69	+0.2
1,258,570	-		LRK53_RS05390	0.69	-0.5
1,258,570	-		LRK53_RS05390	0.69	+0.3
1,258,570	-		LRK53_RS05390	0.69	-0.1
1,258,629	+		LRK53_RS05390	0.73	-0.9
1,258,629	+		LRK53_RS05390	0.73	-0.5
1,258,630	-		LRK53_RS05390	0.73	+0.5
1,258,830	+		LRK53_RS05390	0.89	+0.9
1,258,831	-		LRK53_RS05390	0.89	-0.8
1,258,831	-		LRK53_RS05390	0.89	-0.3
1,258,947	+				+0.4
1,258,947	+				+0.2
1,258,947	+				+0.2
1,258,947	+				-0.6
1,258,948	-				+0.3
1,258,948	-				-0.1
1,258,948	-				-0.6
1,258,948	-				-0.6
1,258,956	+				-0.3
1,258,956	+				-3.5
1,258,956	+				+0.9
1,258,956	+				+0.6
1,258,956	+				-2.1
1,258,956	+				-0.6
1,258,956	+				-0.3
1,258,956	+				+0.1
1,258,956	+				-1.9
1,258,956	+				+0.5
1,258,956	+				+0.2
1,258,956	+				-0.5
1,258,956	+				-0.3
1,258,956	+				+0.0
1,258,956	+				-0.7
1,258,957	-				+0.2
1,258,957	-				-0.7
1,258,957	-				-1.2
1,258,957	-				+0.6
1,258,957	-				-2.4
1,258,957	-				-0.8
1,258,957	-				-0.1
1,258,957	-				+2.8
1,258,957	-				+1.2
1,258,957	-				-1.8
1,258,957	-				+0.0
1,259,273	+		LRK53_RS05395	0.40	+0.8
1,259,273	+		LRK53_RS05395	0.40	-3.2
1,259,440	+		LRK53_RS05395	0.72	-0.9
1,259,440	+		LRK53_RS05395	0.72	-0.7
1,259,440	+		LRK53_RS05395	0.72	-0.7
1,259,440	+		LRK53_RS05395	0.72	-0.9
1,259,440	+		LRK53_RS05395	0.72	-0.1
1,259,440	+		LRK53_RS05395	0.72	-0.3
1,259,440	+		LRK53_RS05395	0.72	-1.0
1,259,440	+		LRK53_RS05395	0.72	-2.5
1,259,440	+		LRK53_RS05395	0.72	-0.5
1,259,440	+		LRK53_RS05395	0.72	+0.8
1,259,440	+		LRK53_RS05395	0.72	+0.3
1,259,441	-		LRK53_RS05395	0.73	-1.8
1,259,441	-		LRK53_RS05395	0.73	-0.9
1,259,441	-		LRK53_RS05395	0.73	-0.8
1,259,462	-		LRK53_RS05395	0.77	-0.2
1,259,556	-				+1.7
1,259,556	-				+0.9
1,259,579	-				-1.5
1,259,579	-				-2.1
1,259,579	-				-2.2
1,259,579	-				-0.0
1,259,579	-				-0.2
1,259,579	-				-1.2
1,259,606	-				-1.2
1,259,606	-				-1.0
1,259,674	+				+0.0
1,259,674	+				-0.1
1,259,674	+				-1.4
1,259,674	+				+1.7
1,259,674	+				-1.2
1,259,674	+				+0.1
1,259,674	+				-0.8
1,259,674	+				-1.2
1,259,674	+				+0.7
1,259,685	+				+1.0
1,259,685	+				-0.8
1,259,685	+				-0.6
1,259,685	+				-1.1
1,259,685	+				-0.5
1,259,685	+				+1.1
1,259,685	+				+0.7
1,259,685	+				+0.3
1,259,685	+				+1.1
1,259,685	+				-0.3
1,259,685	+				-0.3
1,259,685	+				+1.3
1,259,685	+				-1.4
1,259,685	+				+1.5
1,259,685	+				-1.7
1,259,685	+				-0.8
1,259,685	+				-0.2
1,259,685	+				-0.4
1,259,685	+				-1.1
1,259,685	+				-0.4
1,259,685	+				-2.1
1,259,685	+				+0.4
1,259,685	+				+0.0
1,259,685	+				-0.6
1,259,685	+				-0.9
1,259,685	+				-0.8
1,259,685	+				-0.3
1,259,686	-				-0.2
1,259,686	-				+1.2
1,259,686	-				-2.3