Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04695

Experiment: Biofilm; Day2; SGW; pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm; Day2; SGW; pH7
1,092,512	-		LRK53_RS04690	0.63	+0.8
1,092,512	-		LRK53_RS04690	0.63	-0.4
1,092,529	+		LRK53_RS04690	0.64	-0.8
1,092,529	+		LRK53_RS04690	0.64	-0.2
1,092,529	+		LRK53_RS04690	0.64	-1.4
1,092,529	+		LRK53_RS04690	0.64	-0.8
1,092,529	+		LRK53_RS04690	0.64	-1.0
1,092,530	-		LRK53_RS04690	0.64	-0.5
1,092,668	+		LRK53_RS04690	0.78	-1.4
1,092,991	+				+0.8
1,092,991	+				-1.2
1,092,992	-				+0.2
1,092,992	-				-1.8
1,092,996	-				-0.9
1,092,996	-				-0.7
1,092,996	-				-0.5
1,092,996	-				-0.4
1,093,001	+				+1.3
1,093,001	+				-0.7
1,093,001	+				+0.2
1,093,001	+				+0.4
1,093,001	+				-1.7
1,093,001	+				-0.4
1,093,001	+				-0.9
1,093,001	+				+2.1
1,093,001	+				-0.3
1,093,001	+				+0.8
1,093,001	+				-0.9
1,093,001	+				+2.0
1,093,001	+				-0.1
1,093,001	+				-1.7
1,093,001	+				-0.9
1,093,002	-				-2.6
1,093,002	-				-0.8
1,093,002	-				-0.0
1,093,002	-				-0.1
1,093,002	-				+0.4
1,093,002	-				-0.5
1,093,002	-				+0.5
1,093,002	-				-0.2
1,093,002	-				-0.5
1,093,002	-				-1.2
1,093,002	-				-0.8
1,093,002	-				-2.0
1,093,002	-				-1.2
1,093,003	+				-1.5
1,093,003	+				-1.4
1,093,003	+				-2.0
1,093,003	+				-1.5
1,093,003	+				-0.6
1,093,003	+				-1.3
1,093,003	+				-1.8
1,093,003	+				+0.7
1,093,003	+				+0.6
1,093,003	+				+0.9
1,093,003	+				-2.2
1,093,003	+				-1.3
1,093,004	-				-1.5
1,093,004	-				+0.1
1,093,004	-				-0.2
1,093,004	-				-1.0
1,093,004	-				+0.6
1,093,004	-				-0.0
1,093,004	-				-1.5
1,093,004	-				-1.6
1,093,004	-				-1.1
1,093,004	-				-0.1
1,093,005	+				+1.5
1,093,005	+				-0.8
1,093,005	+				-0.2
1,093,005	+				-0.3
1,093,005	+				+0.4
1,093,006	-				+0.6
1,093,006	-				-0.5
1,093,006	-				-0.5
1,093,006	-				-0.2
1,093,011	+				-0.2
1,093,027	+				+1.7
1,093,028	-				+0.2
1,093,055	+				-1.7
1,093,234	-				-2.6
1,093,391	-		LRK53_RS04695	0.12	-1.0
1,093,391	-		LRK53_RS04695	0.12	-0.6
1,093,391	-		LRK53_RS04695	0.12	-0.6
1,093,423	+		LRK53_RS04695	0.15	-1.2
1,093,423	+		LRK53_RS04695	0.15	-1.4
1,093,423	+		LRK53_RS04695	0.15	-0.5
1,093,423	+		LRK53_RS04695	0.15	-1.3
1,093,423	+		LRK53_RS04695	0.15	+0.2
1,093,423	+		LRK53_RS04695	0.15	-2.1
1,093,423	+		LRK53_RS04695	0.15	-0.7
1,093,423	+		LRK53_RS04695	0.15	-0.3
1,093,423	+		LRK53_RS04695	0.15	-1.7
1,093,424	-		LRK53_RS04695	0.15	-0.6
1,093,424	-		LRK53_RS04695	0.15	-0.9
1,093,424	-		LRK53_RS04695	0.15	+0.0
1,093,474	-		LRK53_RS04695	0.20	+0.1
1,093,715	-		LRK53_RS04695	0.44	-1.3
1,093,915	+		LRK53_RS04695	0.63	-0.2
1,093,915	+		LRK53_RS04695	0.63	-1.8
1,093,915	+		LRK53_RS04695	0.63	-1.0
1,093,916	-		LRK53_RS04695	0.63	-0.9
1,093,916	-		LRK53_RS04695	0.63	+1.0
1,093,999	+		LRK53_RS04695	0.72	+0.2
1,093,999	+		LRK53_RS04695	0.72	-0.8
1,093,999	+		LRK53_RS04695	0.72	-1.8
1,094,222	-				-0.3
1,094,478	+				-0.5
1,094,478	+				-1.0
1,094,478	+				+0.0
1,094,478	+				+0.4
1,094,478	+				+0.2
1,094,478	+				-1.5
1,094,479	-				+1.5
1,094,479	-				-0.9
1,094,479	-				-0.0
1,094,479	-				+1.4
1,094,479	-				+0.4
1,094,479	-				+2.1
1,094,479	-				-1.0
1,094,512	-		LRK53_RS04700	0.12	-0.4
1,094,512	-		LRK53_RS04700	0.12	+1.1
1,094,518	-		LRK53_RS04700	0.12	-0.3
1,094,518	-		LRK53_RS04700	0.12	+0.2
1,094,518	-		LRK53_RS04700	0.12	-1.2
1,094,830	+		LRK53_RS04700	0.38	-0.3
1,094,830	+		LRK53_RS04700	0.38	-1.3
1,094,973	+		LRK53_RS04700	0.50	-1.2
1,094,973	+		LRK53_RS04700	0.50	+0.2
1,094,973	+		LRK53_RS04700	0.50	+1.2
1,094,973	+		LRK53_RS04700	0.50	-2.1
1,094,973	+		LRK53_RS04700	0.50	-0.0
1,094,973	+		LRK53_RS04700	0.50	-0.0
1,094,974	-		LRK53_RS04700	0.50	-0.5
1,094,974	-		LRK53_RS04700	0.50	-1.5
1,095,093	+		LRK53_RS04700	0.60	-0.2
1,095,093	+		LRK53_RS04700	0.60	-1.2
1,095,093	+		LRK53_RS04700	0.60	-1.2
1,095,093	+		LRK53_RS04700	0.60	-2.1
1,095,093	+		LRK53_RS04700	0.60	-1.0
1,095,093	+		LRK53_RS04700	0.60	+0.3
1,095,093	+		LRK53_RS04700	0.60	-0.8
1,095,093	+		LRK53_RS04700	0.60	-1.5
1,095,093	+		LRK53_RS04700	0.60	-0.3
1,095,094	-		LRK53_RS04700	0.60	-1.4
1,095,094	-		LRK53_RS04700	0.60	+1.1
1,095,094	-		LRK53_RS04700	0.60	-1.0
1,095,094	-		LRK53_RS04700	0.60	-0.8
1,095,094	-		LRK53_RS04700	0.60	-0.2
1,095,094	-		LRK53_RS04700	0.60	-0.6
1,095,094	-		LRK53_RS04700	0.60	-0.2
1,095,094	-		LRK53_RS04700	0.60	-1.2
1,095,204	+		LRK53_RS04700	0.70	-1.5
1,095,204	+		LRK53_RS04700	0.70	-0.5
1,095,204	+		LRK53_RS04700	0.70	+0.3
1,095,204	+		LRK53_RS04700	0.70	+0.2
1,095,204	+		LRK53_RS04700	0.70	-0.9
1,095,204	+		LRK53_RS04700	0.70	+0.7
1,095,204	+		LRK53_RS04700	0.70	-0.5
1,095,204	+		LRK53_RS04700	0.70	+1.1
1,095,204	+		LRK53_RS04700	0.70	-0.7
1,095,204	+		LRK53_RS04700	0.70	-0.9
1,095,204	+		LRK53_RS04700	0.70	+1.6
1,095,204	+		LRK53_RS04700	0.70	+1.2
1,095,204	+		LRK53_RS04700	0.70	-0.9
1,095,205	-		LRK53_RS04700	0.70	-1.9
1,095,205	-		LRK53_RS04700	0.70	-0.8
1,095,205	-		LRK53_RS04700	0.70	-0.3
1,095,205	-		LRK53_RS04700	0.70	-0.5
1,095,205	-		LRK53_RS04700	0.70	-1.3
1,095,205	-		LRK53_RS04700	0.70	-1.6
1,095,205	-		LRK53_RS04700	0.70	+0.2
1,095,205	-		LRK53_RS04700	0.70	+0.5
1,095,205	-		LRK53_RS04700	0.70	-0.6
1,095,205	-		LRK53_RS04700	0.70	+0.4
1,095,205	-		LRK53_RS04700	0.70	+0.2
1,095,205	-		LRK53_RS04700	0.70	-1.0
1,095,205	-		LRK53_RS04700	0.70	-2.2
1,095,205	-		LRK53_RS04700	0.70	+1.7
1,095,205	-		LRK53_RS04700	0.70	-0.9
1,095,208	-		LRK53_RS04700	0.70	+0.9