Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04405

Experiment: Biofilm; Day2; SGW; pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm; Day2; SGW; pH7
1,023,684	+		LRK53_RS04400	0.66	-1.2
1,023,684	+		LRK53_RS04400	0.66	-1.8
1,023,684	+		LRK53_RS04400	0.66	+0.2
1,023,684	+		LRK53_RS04400	0.66	+1.5
1,023,684	+		LRK53_RS04400	0.66	-0.0
1,023,685	-		LRK53_RS04400	0.67	-0.5
1,023,685	-		LRK53_RS04400	0.67	-1.1
1,023,685	-		LRK53_RS04400	0.67	+0.6
1,023,685	-		LRK53_RS04400	0.67	-0.4
1,023,692	+		LRK53_RS04400	0.67	-2.2
1,023,693	-		LRK53_RS04400	0.67	-0.2
1,023,693	-		LRK53_RS04400	0.67	-1.8
1,023,827	-		LRK53_RS04400	0.72	+0.3
1,023,859	+		LRK53_RS04400	0.73	-0.6
1,023,870	+		LRK53_RS04400	0.73	-1.3
1,023,870	+		LRK53_RS04400	0.73	-0.1
1,023,870	+		LRK53_RS04400	0.73	-1.0
1,023,870	+		LRK53_RS04400	0.73	-0.9
1,023,870	+		LRK53_RS04400	0.73	-0.8
1,023,870	+		LRK53_RS04400	0.73	+1.6
1,023,871	-		LRK53_RS04400	0.74	-1.9
1,023,871	-		LRK53_RS04400	0.74	-0.8
1,023,871	-		LRK53_RS04400	0.74	-1.4
1,023,871	-		LRK53_RS04400	0.74	-0.9
1,023,871	-		LRK53_RS04400	0.74	-0.6
1,023,871	-		LRK53_RS04400	0.74	+0.7
1,023,871	-		LRK53_RS04400	0.74	-0.9
1,023,871	-		LRK53_RS04400	0.74	-1.8
1,023,871	-		LRK53_RS04400	0.74	-1.8
1,023,871	-		LRK53_RS04400	0.74	-0.4
1,023,871	-		LRK53_RS04400	0.74	+1.3
1,023,892	+		LRK53_RS04400	0.74	-0.9
1,023,892	+		LRK53_RS04400	0.74	-1.1
1,023,893	-		LRK53_RS04400	0.74	-1.9
1,023,942	+		LRK53_RS04400	0.76	-1.1
1,023,942	+		LRK53_RS04400	0.76	-1.7
1,023,942	+		LRK53_RS04400	0.76	-0.8
1,023,942	+		LRK53_RS04400	0.76	+2.3
1,023,942	+		LRK53_RS04400	0.76	+0.2
1,023,942	+		LRK53_RS04400	0.76	-0.0
1,023,942	+		LRK53_RS04400	0.76	+1.9
1,023,942	+		LRK53_RS04400	0.76	-0.8
1,023,943	-		LRK53_RS04400	0.76	-1.7
1,023,943	-		LRK53_RS04400	0.76	-2.2
1,023,943	-		LRK53_RS04400	0.76	+0.8
1,023,943	-		LRK53_RS04400	0.76	+0.9
1,023,943	-		LRK53_RS04400	0.76	-0.2
1,023,943	-		LRK53_RS04400	0.76	+1.0
1,023,967	+		LRK53_RS04400	0.77	+0.4
1,023,967	+		LRK53_RS04400	0.77	+0.0
1,023,967	+		LRK53_RS04400	0.77	-0.6
1,023,968	-		LRK53_RS04400	0.77	-0.6
1,024,036	+		LRK53_RS04400	0.80	+2.1
1,024,036	+		LRK53_RS04400	0.80	-0.0
1,024,036	+		LRK53_RS04400	0.80	-0.0
1,024,036	+		LRK53_RS04400	0.80	-0.4
1,024,036	+		LRK53_RS04400	0.80	-1.3
1,024,036	+		LRK53_RS04400	0.80	-0.1
1,024,036	+		LRK53_RS04400	0.80	-2.1
1,024,036	+		LRK53_RS04400	0.80	+0.8
1,024,037	-		LRK53_RS04400	0.80	-0.2
1,024,037	-		LRK53_RS04400	0.80	-1.3
1,024,037	-		LRK53_RS04400	0.80	+2.4
1,024,037	-		LRK53_RS04400	0.80	+1.0
1,024,037	-		LRK53_RS04400	0.80	-2.6
1,024,037	-		LRK53_RS04400	0.80	-2.9
1,024,037	-		LRK53_RS04400	0.80	-0.8
1,024,041	+		LRK53_RS04400	0.80	-0.9
1,024,041	+		LRK53_RS04400	0.80	-1.8
1,024,042	-		LRK53_RS04400	0.80	-0.8
1,024,042	-		LRK53_RS04400	0.80	-1.1
1,024,042	-		LRK53_RS04400	0.80	+0.2
1,024,042	-		LRK53_RS04400	0.80	+0.1
1,024,042	-		LRK53_RS04400	0.80	+3.8
1,024,042	-		LRK53_RS04400	0.80	-0.6
1,024,062	+		LRK53_RS04400	0.81	-2.5
1,024,063	-		LRK53_RS04400	0.81	-2.0
1,024,117	+		LRK53_RS04400	0.83	-1.6
1,024,117	+		LRK53_RS04400	0.83	-1.8
1,024,117	+		LRK53_RS04400	0.83	-1.0
1,024,117	+		LRK53_RS04400	0.83	+0.6
1,024,117	+		LRK53_RS04400	0.83	+1.1
1,024,118	-		LRK53_RS04400	0.83	-0.5
1,024,118	-		LRK53_RS04400	0.83	-0.6
1,024,118	-		LRK53_RS04400	0.83	-0.6
1,024,119	+		LRK53_RS04400	0.83	-1.1
1,024,120	-		LRK53_RS04400	0.83	-0.4
1,024,120	-		LRK53_RS04400	0.83	+1.6
1,024,120	-		LRK53_RS04400	0.83	-0.2
1,024,120	-		LRK53_RS04400	0.83	-0.2
1,024,120	-		LRK53_RS04400	0.83	-0.3
1,024,126	+		LRK53_RS04400	0.83	-1.0
1,024,126	+		LRK53_RS04400	0.83	-0.9
1,024,127	-		LRK53_RS04400	0.83	-0.9
1,024,127	-		LRK53_RS04400	0.83	-2.1
1,024,237	+		LRK53_RS04400	0.87	+1.0
1,024,238	-		LRK53_RS04400	0.87	-1.8
1,024,238	-		LRK53_RS04400	0.87	-3.0
1,024,238	-		LRK53_RS04400	0.87	-1.8
1,024,238	-		LRK53_RS04400	0.87	-0.4
1,024,281	+		LRK53_RS04400	0.89	+0.3
1,024,281	+		LRK53_RS04400	0.89	-1.1
1,024,281	+		LRK53_RS04400	0.89	-1.1
1,024,282	-		LRK53_RS04400	0.89	-2.8
1,024,282	-		LRK53_RS04400	0.89	+0.8
1,024,282	-		LRK53_RS04400	0.89	-2.4
1,024,282	-		LRK53_RS04400	0.89	-0.6
1,024,312	-				-1.0
1,024,371	-				-0.6
1,024,394	+				-0.0
1,024,394	+				-0.1
1,024,395	-				-0.6
1,024,395	-				-0.2
1,024,395	-				-1.3
1,024,413	+				-1.3
1,024,413	+				+0.5
1,024,413	+				-0.5
1,024,413	+				-0.0
1,024,413	+				-0.1
1,024,413	+				+1.4
1,024,414	-				-1.3
1,024,414	-				-0.4
1,024,414	-				-2.7
1,024,414	-				-0.6
1,024,414	-				-1.2
1,024,414	-				-1.6
1,024,451	-				+0.2
1,024,451	-				-1.4
1,024,457	+				-0.1
1,024,457	+				-0.2
1,024,458	-				-0.2
1,024,458	-				+0.4
1,024,478	-				+0.2
1,024,478	-				+0.3
1,024,497	+				-1.1
1,024,601	-				-0.4
1,024,601	-				-1.2
1,024,601	-				-0.4
1,024,618	+				-1.8
1,024,618	+				-0.9
1,024,619	-				-0.1
1,024,619	-				+2.7
1,024,624	+				+1.1
1,024,789	+		LRK53_RS04405	0.18	-0.0
1,024,789	+		LRK53_RS04405	0.18	+0.2
1,024,789	+		LRK53_RS04405	0.18	+0.2
1,024,789	+		LRK53_RS04405	0.18	-1.1
1,024,789	+		LRK53_RS04405	0.18	+0.1
1,024,789	+		LRK53_RS04405	0.18	-1.7
1,024,790	-		LRK53_RS04405	0.18	-0.2
1,024,790	-		LRK53_RS04405	0.18	-2.2
1,024,790	-		LRK53_RS04405	0.18	-0.9
1,024,790	-		LRK53_RS04405	0.18	-2.1
1,024,790	-		LRK53_RS04405	0.18	-0.6
1,024,790	-		LRK53_RS04405	0.18	-0.8
1,024,790	-		LRK53_RS04405	0.18	-0.9
1,024,790	-		LRK53_RS04405	0.18	-0.8
1,024,790	-		LRK53_RS04405	0.18	-1.4
1,024,824	+		LRK53_RS04405	0.21	-1.5
1,024,824	+		LRK53_RS04405	0.21	-1.0
1,024,824	+		LRK53_RS04405	0.21	-0.3
1,024,849	-		LRK53_RS04405	0.23	+0.2
1,024,867	+		LRK53_RS04405	0.25	-1.2
1,024,867	+		LRK53_RS04405	0.25	-0.2
1,024,868	-		LRK53_RS04405	0.25	+2.1
1,024,933	+		LRK53_RS04405	0.30	-0.2
1,024,934	-		LRK53_RS04405	0.30	-2.4
1,024,952	-		LRK53_RS04405	0.32	-0.4
1,024,952	-		LRK53_RS04405	0.32	-0.8
1,025,010	+		LRK53_RS04405	0.37	-2.8
1,025,010	+		LRK53_RS04405	0.37	+1.7
1,025,010	+		LRK53_RS04405	0.37	-1.7
1,025,010	+		LRK53_RS04405	0.37	-1.1
1,025,010	+		LRK53_RS04405	0.37	-0.3
1,025,011	-		LRK53_RS04405	0.37	-0.8
1,025,011	-		LRK53_RS04405	0.37	-0.2
1,025,011	-		LRK53_RS04405	0.37	-0.4
1,025,014	+		LRK53_RS04405	0.37	-2.0
1,025,014	+		LRK53_RS04405	0.37	-0.2
1,025,014	+		LRK53_RS04405	0.37	+0.4
1,025,014	+		LRK53_RS04405	0.37	-0.2
1,025,015	-		LRK53_RS04405	0.37	-0.0
1,025,015	-		LRK53_RS04405	0.37	-1.7
1,025,015	-		LRK53_RS04405	0.37	-1.8
1,025,015	-		LRK53_RS04405	0.37	-2.3
1,025,015	-		LRK53_RS04405	0.37	+0.2
1,025,015	-		LRK53_RS04405	0.37	-1.5
1,025,062	+		LRK53_RS04405	0.41	-0.2
1,025,062	+		LRK53_RS04405	0.41	-0.8
1,025,062	+		LRK53_RS04405	0.41	-3.8
1,025,062	+		LRK53_RS04405	0.41	-0.5
1,025,062	+		LRK53_RS04405	0.41	-0.4
1,025,062	+		LRK53_RS04405	0.41	-1.8
1,025,062	+		LRK53_RS04405	0.41	-0.6
1,025,062	+		LRK53_RS04405	0.41	+0.0
1,025,062	+		LRK53_RS04405	0.41	-1.3
1,025,062	+		LRK53_RS04405	0.41	+0.4
1,025,063	-		LRK53_RS04405	0.41	-0.4
1,025,063	-		LRK53_RS04405	0.41	+0.2
1,025,063	-		LRK53_RS04405	0.41	-0.4
1,025,063	-		LRK53_RS04405	0.41	+0.2
1,025,063	-		LRK53_RS04405	0.41	+0.0
1,025,063	-		LRK53_RS04405	0.41	-1.3
1,025,063	-		LRK53_RS04405	0.41	-3.1
1,025,176	+		LRK53_RS04405	0.51	+0.9
1,025,176	+		LRK53_RS04405	0.51	-1.7
1,025,177	-		LRK53_RS04405	0.51	-2.7
1,025,196	+		LRK53_RS04405	0.52	-2.8
1,025,196	+		LRK53_RS04405	0.52	+0.2
1,025,197	-		LRK53_RS04405	0.53	-0.6
1,025,197	-		LRK53_RS04405	0.53	-0.1
1,025,197	-		LRK53_RS04405	0.53	-1.1
1,025,224	+		LRK53_RS04405	0.55	-1.1
1,025,224	+		LRK53_RS04405	0.55	-0.7
1,025,224	+		LRK53_RS04405	0.55	-1.0
1,025,224	+		LRK53_RS04405	0.55	-1.2
1,025,224	+		LRK53_RS04405	0.55	+1.1
1,025,224	+		LRK53_RS04405	0.55	-2.3
1,025,224	+		LRK53_RS04405	0.55	-0.2
1,025,224	+		LRK53_RS04405	0.55	-0.9
1,025,225	-		LRK53_RS04405	0.55	-0.3
1,025,225	-		LRK53_RS04405	0.55	-0.2
1,025,225	-		LRK53_RS04405	0.55	+0.2
1,025,225	-		LRK53_RS04405	0.55	-2.2
1,025,225	-		LRK53_RS04405	0.55	+1.2
1,025,225	-		LRK53_RS04405	0.55	-0.4
1,025,300	+		LRK53_RS04405	0.61	-2.0
1,025,301	-		LRK53_RS04405	0.61	-2.0
1,025,301	-		LRK53_RS04405	0.61	+1.1
1,025,396	-		LRK53_RS04405	0.69	-0.2
1,025,413	+		LRK53_RS04405	0.71	-1.1
1,025,414	-		LRK53_RS04405	0.71	-0.4
1,025,463	+		LRK53_RS04405	0.75	-1.8
1,025,463	+		LRK53_RS04405	0.75	-0.2
1,025,463	+		LRK53_RS04405	0.75	+0.6
1,025,463	+		LRK53_RS04405	0.75	+0.1
1,025,464	-		LRK53_RS04405	0.75	-1.4
1,025,464	-		LRK53_RS04405	0.75	-0.2
1,025,464	-		LRK53_RS04405	0.75	-2.0
1,025,498	-		LRK53_RS04405	0.78	-1.5
1,025,514	-		LRK53_RS04405	0.79	-1.3
1,025,606	+		LRK53_RS04405	0.87	-3.4
1,025,606	+		LRK53_RS04405	0.87	-1.2
1,025,607	-		LRK53_RS04405	0.87	+0.8
1,025,607	-		LRK53_RS04405	0.87	-1.0
1,025,607	-		LRK53_RS04405	0.87	-0.9
1,025,607	-		LRK53_RS04405	0.87	-1.0
1,025,607	-		LRK53_RS04405	0.87	-1.2
1,025,715	-				-1.2
1,025,715	-				-0.4
1,025,756	+				+0.4
1,025,756	+				-2.7
1,025,756	+				+0.6
1,025,756	+				-1.2
1,025,756	+				-0.4
1,025,756	+				-0.7
1,026,135	+				-1.0
1,026,136	-				-1.4
1,026,136	-				-0.4
1,026,172	+				-0.5
1,026,172	+				-0.6
1,026,172	+				-1.0
1,026,173	-				-1.9
1,026,173	-				+0.1
1,026,173	-				-1.2
1,026,173	-				+0.2
1,026,205	+				-0.5
1,026,205	+				-0.0
1,026,206	-				-0.9
1,026,252	-				+0.0
1,026,252	-				+1.1
1,026,252	-				-0.8
1,026,258	+				-0.2
1,026,267	+				-0.3
1,026,267	+				-0.0
1,026,267	+				+0.3
1,026,268	-				-0.4
1,026,268	-				-0.6
1,026,270	+				-1.7
1,026,270	+				-1.1
1,026,273	-				-0.4
1,026,273	-				-1.5
1,026,273	-				+0.3
1,026,278	+				-1.8
1,026,278	+				+0.2
1,026,278	+				+0.2
1,026,279	-				-0.8
1,026,279	-				-2.1
1,026,284	+				-0.4
1,026,284	+				+0.4
1,026,284	+				-0.2
1,026,285	-				-0.9
1,026,285	-				+1.6
1,026,285	-				+0.9
1,026,285	-				+0.5
1,026,285	-				-1.2
1,026,348	+				-0.9
1,026,349	-				+1.2
1,026,349	-				-0.9
1,026,349	-				-0.9
1,026,349	-				-1.4
1,026,349	-				-1.5
1,026,349	-				-1.4
1,026,356	-				-0.9
1,026,356	-				+0.6
1,026,356	-				-0.7
1,026,395	+				-0.0
1,026,396	-				+1.2
1,026,397	+				-0.3
1,026,397	+				-1.0
1,026,397	+				-1.9
1,026,397	+				-0.1
1,026,397	+				-0.2
1,026,397	+				-0.1
1,026,397	+				+0.6
1,026,397	+				+0.6
1,026,397	+				+1.1
1,026,398	-				+1.3
1,026,398	-				-0.4
1,026,398	-				-1.8
1,026,398	-				-1.4
1,026,398	-				+0.2
1,026,398	-				-1.5
1,026,398	-				+1.8
1,026,398	-				-1.2
1,026,398	-				+1.8
1,026,398	-				+0.2
1,026,398	-				-1.6
1,026,398	-				+0.6
1,026,398	-				+0.1
1,026,398	-				-0.5
1,026,401	+				+1.9
1,026,401	+				+0.3
1,026,401	+				+0.4
1,026,401	+				-0.2
1,026,401	+				-0.9
1,026,401	+				+0.3
1,026,402	-				+0.0
1,026,402	-				+0.9
1,026,402	-				-0.6
1,026,402	-				-0.4
1,026,402	-				-1.2
1,026,402	-				-0.1
1,026,402	-				-0.5
1,026,402	-				+1.6
1,026,402	-				-0.5
1,026,402	-				+0.2
1,026,431	+				+0.2
1,026,432	-				-0.3
1,026,432	-				+0.6
1,026,432	-				-1.8
1,026,445	+				-0.2
1,026,445	+				+0.2
1,026,445	+				-1.6
1,026,445	+				-0.7
1,026,445	+				-0.2
1,026,513	+		LRK53_RS04415	0.14	+2.0
1,026,513	+		LRK53_RS04415	0.14	-0.2
1,026,513	+		LRK53_RS04415	0.14	-0.9
1,026,513	+		LRK53_RS04415	0.14	-0.5
1,026,513	+		LRK53_RS04415	0.14	-0.6
1,026,514	-		LRK53_RS04415	0.14	+0.2
1,026,514	-		LRK53_RS04415	0.14	-0.4
1,026,514	-		LRK53_RS04415	0.14	+1.6
1,026,669	+		LRK53_RS04415	0.28	-1.9
1,026,669	+		LRK53_RS04415	0.28	-0.2
1,026,669	+		LRK53_RS04415	0.28	-0.4
1,026,669	+		LRK53_RS04415	0.28	-2.4
1,026,670	-		LRK53_RS04415	0.28	+1.8
1,026,670	-		LRK53_RS04415	0.28	-2.7
1,026,681	+		LRK53_RS04415	0.29	+1.0
1,026,681	+		LRK53_RS04415	0.29	-1.3
1,026,681	+		LRK53_RS04415	0.29	+1.4
1,026,681	+		LRK53_RS04415	0.29	-0.5
1,026,681	+		LRK53_RS04415	0.29	-0.7
1,026,681	+		LRK53_RS04415	0.29	-1.5
1,026,681	+		LRK53_RS04415	0.29	-0.5
1,026,681	+		LRK53_RS04415	0.29	+2.1
1,026,681	+		LRK53_RS04415	0.29	-0.2
1,026,681	+		LRK53_RS04415	0.29	-2.3
1,026,681	+		LRK53_RS04415	0.29	+0.4
1,026,681	+		LRK53_RS04415	0.29	-0.4
1,026,681	+		LRK53_RS04415	0.29	-1.9
1,026,681	+		LRK53_RS04415	0.29	-0.2
1,026,681	+		LRK53_RS04415	0.29	-2.7
1,026,682	-		LRK53_RS04415	0.29	-0.3
1,026,682	-		LRK53_RS04415	0.29	-0.1
1,026,682	-		LRK53_RS04415	0.29	+2.3
1,026,682	-		LRK53_RS04415	0.29	-1.8
1,026,682	-		LRK53_RS04415	0.29	-1.3
1,026,682	-		LRK53_RS04415	0.29	+0.4
1,026,682	-		LRK53_RS04415	0.29	+0.0
1,026,682	-		LRK53_RS04415	0.29	+1.0
1,026,682	-		LRK53_RS04415	0.29	+0.4
1,026,682	-		LRK53_RS04415	0.29	-1.1
1,026,682	-		LRK53_RS04415	0.29	-0.8
1,026,682	-		LRK53_RS04415	0.29	+0.1
1,026,682	-		LRK53_RS04415	0.29	+0.4
1,026,682	-		LRK53_RS04415	0.29	-1.1
1,026,682	-		LRK53_RS04415	0.29	+0.3
1,026,682	-		LRK53_RS04415	0.29	-0.4
1,026,682	-		LRK53_RS04415	0.29	+2.1
1,026,682	-		LRK53_RS04415	0.29	-0.7
1,026,682	-		LRK53_RS04415	0.29	-1.5
1,026,685	+		LRK53_RS04415	0.30	-0.6
1,026,685	+		LRK53_RS04415	0.30	+1.2
1,026,686	-		LRK53_RS04415	0.30	+0.2
1,026,686	-		LRK53_RS04415	0.30	-1.1
1,026,686	-		LRK53_RS04415	0.30	+0.6
1,026,686	-		LRK53_RS04415	0.30	-0.2
1,026,686	-		LRK53_RS04415	0.30	+1.2
1,026,686	-		LRK53_RS04415	0.30	-2.8
1,026,717	+		LRK53_RS04415	0.33	+0.4
1,026,718	-		LRK53_RS04415	0.33	-0.2