Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS15485

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS15480 and A4249_RS15485 overlap by 4 nucleotidesA4249_RS15485 and A4249_RS15490 are separated by 132 nucleotidesA4249_RS15490 and A4249_RS15495 are separated by 7 nucleotides A4249_RS15480: A4249_RS15480 - histidine kinase dimerization/phosphoacceptor domain -containing protein, at 3,133,842 to 3,136,016 _RS15480 A4249_RS15485: A4249_RS15485 - biliverdin-producing heme oxygenase, at 3,136,013 to 3,136,600 _RS15485 A4249_RS15490: A4249_RS15490 - transglutaminase family protein, at 3,136,733 to 3,137,509 _RS15490 A4249_RS15495: A4249_RS15495 - M1 family metallopeptidase, at 3,137,517 to 3,139,241 _RS15495 Position (kb) 3136 3137Strain fitness (log2 ratio) -2 -1 0 1 2at 3135.056 kb on - strand, within A4249_RS15480at 3135.098 kb on + strand, within A4249_RS15480at 3135.133 kb on + strand, within A4249_RS15480at 3135.133 kb on + strand, within A4249_RS15480at 3135.133 kb on + strand, within A4249_RS15480at 3135.133 kb on + strand, within A4249_RS15480at 3135.134 kb on - strand, within A4249_RS15480at 3135.134 kb on - strand, within A4249_RS15480at 3135.134 kb on - strand, within A4249_RS15480at 3135.134 kb on - strand, within A4249_RS15480at 3135.146 kb on + strand, within A4249_RS15480at 3135.146 kb on + strand, within A4249_RS15480at 3135.146 kb on + strand, within A4249_RS15480at 3135.147 kb on - strand, within A4249_RS15480at 3135.241 kb on + strand, within A4249_RS15480at 3135.241 kb on + strand, within A4249_RS15480at 3135.241 kb on + strand, within A4249_RS15480at 3135.241 kb on + strand, within A4249_RS15480at 3135.242 kb on - strand, within A4249_RS15480at 3135.242 kb on - strand, within A4249_RS15480at 3135.335 kb on + strand, within A4249_RS15480at 3135.335 kb on + strand, within A4249_RS15480at 3135.335 kb on + strand, within A4249_RS15480at 3135.335 kb on + strand, within A4249_RS15480at 3135.335 kb on + strand, within A4249_RS15480at 3135.335 kb on + strand, within A4249_RS15480at 3135.336 kb on - strand, within A4249_RS15480at 3135.336 kb on - strand, within A4249_RS15480at 3135.336 kb on - strand, within A4249_RS15480at 3135.376 kb on + strand, within A4249_RS15480at 3135.376 kb on + strand, within A4249_RS15480at 3135.377 kb on - strand, within A4249_RS15480at 3135.377 kb on - strand, within A4249_RS15480at 3135.377 kb on - strand, within A4249_RS15480at 3135.377 kb on - strand, within A4249_RS15480at 3135.496 kb on + strand, within A4249_RS15480at 3135.496 kb on + strand, within A4249_RS15480at 3135.497 kb on - strand, within A4249_RS15480at 3135.497 kb on - strand, within A4249_RS15480at 3135.497 kb on - strand, within A4249_RS15480at 3135.497 kb on - strand, within A4249_RS15480at 3135.725 kb on - strand, within A4249_RS15480at 3136.176 kb on + strand, within A4249_RS15485at 3136.177 kb on - strand, within A4249_RS15485at 3136.272 kb on + strand, within A4249_RS15485at 3136.272 kb on + strand, within A4249_RS15485at 3136.272 kb on + strand, within A4249_RS15485at 3136.272 kb on + strand, within A4249_RS15485at 3136.272 kb on + strand, within A4249_RS15485at 3136.272 kb on + strand, within A4249_RS15485at 3136.272 kb on + strand, within A4249_RS15485at 3136.272 kb on + strand, within A4249_RS15485at 3136.273 kb on - strand, within A4249_RS15485at 3136.273 kb on - strand, within A4249_RS15485at 3136.273 kb on - strand, within A4249_RS15485at 3136.273 kb on - strand, within A4249_RS15485at 3136.273 kb on - strand, within A4249_RS15485at 3136.273 kb on - strand, within A4249_RS15485at 3136.347 kb on - strand, within A4249_RS15485at 3136.467 kb on + strand, within A4249_RS15485at 3136.612 kb on + strandat 3136.612 kb on + strandat 3136.764 kb on - strandat 3136.764 kb on - strandat 3136.793 kb on + strandat 3136.793 kb on + strandat 3136.793 kb on + strandat 3136.793 kb on + strandat 3136.793 kb on + strandat 3136.793 kb on + strandat 3136.794 kb on - strandat 3136.794 kb on - strandat 3136.794 kb on - strandat 3136.794 kb on - strandat 3136.794 kb on - strandat 3136.794 kb on - strandat 3136.794 kb on - strandat 3136.794 kb on - strandat 3136.794 kb on - strandat 3136.794 kb on - strandat 3136.943 kb on + strand, within A4249_RS15490at 3136.943 kb on + strand, within A4249_RS15490at 3136.943 kb on + strand, within A4249_RS15490at 3136.944 kb on - strand, within A4249_RS15490at 3136.944 kb on - strand, within A4249_RS15490at 3136.944 kb on - strand, within A4249_RS15490at 3136.944 kb on - strand, within A4249_RS15490at 3136.944 kb on - strand, within A4249_RS15490at 3136.944 kb on - strand, within A4249_RS15490at 3137.036 kb on + strand, within A4249_RS15490at 3137.036 kb on + strand, within A4249_RS15490at 3137.036 kb on + strand, within A4249_RS15490at 3137.036 kb on + strand, within A4249_RS15490at 3137.036 kb on + strand, within A4249_RS15490at 3137.037 kb on - strand, within A4249_RS15490at 3137.162 kb on + strand, within A4249_RS15490at 3137.162 kb on + strand, within A4249_RS15490at 3137.162 kb on + strand, within A4249_RS15490at 3137.163 kb on - strand, within A4249_RS15490at 3137.163 kb on - strand, within A4249_RS15490at 3137.518 kb on + strandat 3137.519 kb on - strandat 3137.519 kb on - strandat 3137.542 kb on + strandat 3137.543 kb on - strandat 3137.543 kb on - strandat 3137.543 kb on - strandat 3137.543 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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3,135,056 - A4249_RS15480 0.56 +0.3
3,135,098 + A4249_RS15480 0.58 -0.0
3,135,133 + A4249_RS15480 0.59 +2.2
3,135,133 + A4249_RS15480 0.59 +0.3
3,135,133 + A4249_RS15480 0.59 -0.3
3,135,133 + A4249_RS15480 0.59 +1.5
3,135,134 - A4249_RS15480 0.59 -0.8
3,135,134 - A4249_RS15480 0.59 +0.3
3,135,134 - A4249_RS15480 0.59 -0.7
3,135,134 - A4249_RS15480 0.59 +0.6
3,135,146 + A4249_RS15480 0.60 -0.4
3,135,146 + A4249_RS15480 0.60 +0.2
3,135,146 + A4249_RS15480 0.60 +0.4
3,135,147 - A4249_RS15480 0.60 -0.5
3,135,241 + A4249_RS15480 0.64 -0.8
3,135,241 + A4249_RS15480 0.64 +0.5
3,135,241 + A4249_RS15480 0.64 -0.5
3,135,241 + A4249_RS15480 0.64 -2.4
3,135,242 - A4249_RS15480 0.64 -0.5
3,135,242 - A4249_RS15480 0.64 -0.8
3,135,335 + A4249_RS15480 0.69 -0.2
3,135,335 + A4249_RS15480 0.69 +0.8
3,135,335 + A4249_RS15480 0.69 -1.9
3,135,335 + A4249_RS15480 0.69 +0.1
3,135,335 + A4249_RS15480 0.69 -1.0
3,135,335 + A4249_RS15480 0.69 +0.7
3,135,336 - A4249_RS15480 0.69 +0.9
3,135,336 - A4249_RS15480 0.69 +0.6
3,135,336 - A4249_RS15480 0.69 +0.5
3,135,376 + A4249_RS15480 0.71 -2.3
3,135,376 + A4249_RS15480 0.71 -0.4
3,135,377 - A4249_RS15480 0.71 +0.8
3,135,377 - A4249_RS15480 0.71 +1.0
3,135,377 - A4249_RS15480 0.71 +0.2
3,135,377 - A4249_RS15480 0.71 +0.0
3,135,496 + A4249_RS15480 0.76 +0.3
3,135,496 + A4249_RS15480 0.76 +1.3
3,135,497 - A4249_RS15480 0.76 +0.0
3,135,497 - A4249_RS15480 0.76 -1.0
3,135,497 - A4249_RS15480 0.76 +1.3
3,135,497 - A4249_RS15480 0.76 -1.2
3,135,725 - A4249_RS15480 0.87 -0.1
3,136,176 + A4249_RS15485 0.28 +0.8
3,136,177 - A4249_RS15485 0.28 -2.3
3,136,272 + A4249_RS15485 0.44 +1.1
3,136,272 + A4249_RS15485 0.44 -0.0
3,136,272 + A4249_RS15485 0.44 -0.4
3,136,272 + A4249_RS15485 0.44 -0.3
3,136,272 + A4249_RS15485 0.44 +1.0
3,136,272 + A4249_RS15485 0.44 -0.0
3,136,272 + A4249_RS15485 0.44 +0.3
3,136,272 + A4249_RS15485 0.44 -0.5
3,136,273 - A4249_RS15485 0.44 -0.6
3,136,273 - A4249_RS15485 0.44 +0.5
3,136,273 - A4249_RS15485 0.44 -0.2
3,136,273 - A4249_RS15485 0.44 -0.9
3,136,273 - A4249_RS15485 0.44 +1.1
3,136,273 - A4249_RS15485 0.44 -0.8
3,136,347 - A4249_RS15485 0.57 +0.4
3,136,467 + A4249_RS15485 0.77 -1.0
3,136,612 + -1.0
3,136,612 + -0.8
3,136,764 - -0.6
3,136,764 - -0.2
3,136,793 + +0.5
3,136,793 + +0.5
3,136,793 + +0.1
3,136,793 + -0.4
3,136,793 + -0.3
3,136,793 + +0.2
3,136,794 - +1.1
3,136,794 - -1.2
3,136,794 - -0.1
3,136,794 - +0.1
3,136,794 - -0.4
3,136,794 - -0.5
3,136,794 - +0.1
3,136,794 - -1.7
3,136,794 - +0.1
3,136,794 - +0.2
3,136,943 + A4249_RS15490 0.27 +0.2
3,136,943 + A4249_RS15490 0.27 -0.1
3,136,943 + A4249_RS15490 0.27 -0.8
3,136,944 - A4249_RS15490 0.27 -0.4
3,136,944 - A4249_RS15490 0.27 +0.0
3,136,944 - A4249_RS15490 0.27 -0.4
3,136,944 - A4249_RS15490 0.27 -0.5
3,136,944 - A4249_RS15490 0.27 +0.1
3,136,944 - A4249_RS15490 0.27 -0.0
3,137,036 + A4249_RS15490 0.39 -0.8
3,137,036 + A4249_RS15490 0.39 -0.0
3,137,036 + A4249_RS15490 0.39 +0.2
3,137,036 + A4249_RS15490 0.39 -0.6
3,137,036 + A4249_RS15490 0.39 +0.2
3,137,037 - A4249_RS15490 0.39 -0.5
3,137,162 + A4249_RS15490 0.55 -0.2
3,137,162 + A4249_RS15490 0.55 -0.4
3,137,162 + A4249_RS15490 0.55 +0.8
3,137,163 - A4249_RS15490 0.55 -0.2
3,137,163 - A4249_RS15490 0.55 -1.8
3,137,518 + -0.2
3,137,519 - -0.6
3,137,519 - -1.6
3,137,542 + -0.3
3,137,543 - -0.7
3,137,543 - +0.6
3,137,543 - -0.3
3,137,543 - +0.1

Or see this region's nucleotide sequence