Experiment: Guanine 0.6617 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13640 and A4249_RS13645 overlap by 4 nucleotides A4249_RS13645 and A4249_RS13650 are separated by 72 nucleotides A4249_RS13650 and A4249_RS13655 are separated by 24 nucleotides
A4249_RS13640: A4249_RS13640 - molecular chaperone DnaJ, at 2,757,007 to 2,758,209
_RS13640
A4249_RS13645: A4249_RS13645 - 4-hydroxy-tetrahydrodipicolinate reductase, at 2,758,206 to 2,758,955
_RS13645
A4249_RS13650: A4249_RS13650 - DNA polymerase III subunit epsilon, at 2,759,028 to 2,759,750
_RS13650
A4249_RS13655: A4249_RS13655 - dephospho-CoA kinase, at 2,759,775 to 2,760,407
_RS13655
Position (kb)
2758
2759 Strain fitness (log2 ratio)
-1
0
1
2 at 2757.764 kb on + strand, within A4249_RS13640 at 2757.766 kb on + strand, within A4249_RS13640 at 2757.766 kb on + strand, within A4249_RS13640 at 2757.766 kb on + strand, within A4249_RS13640 at 2757.766 kb on + strand, within A4249_RS13640 at 2757.766 kb on + strand, within A4249_RS13640 at 2757.767 kb on - strand, within A4249_RS13640 at 2757.767 kb on - strand, within A4249_RS13640 at 2757.767 kb on - strand, within A4249_RS13640 at 2757.767 kb on - strand, within A4249_RS13640 at 2758.954 kb on - strand at 2758.954 kb on - strand at 2758.954 kb on - strand at 2759.018 kb on + strand at 2759.018 kb on + strand at 2759.018 kb on + strand at 2759.018 kb on + strand at 2759.018 kb on + strand at 2759.018 kb on + strand at 2759.018 kb on + strand at 2759.018 kb on + strand at 2759.018 kb on + strand at 2759.018 kb on + strand at 2759.018 kb on + strand at 2759.018 kb on + strand at 2759.019 kb on - strand at 2759.019 kb on - strand at 2759.019 kb on - strand at 2759.019 kb on - strand at 2759.030 kb on - strand at 2759.059 kb on + strand at 2759.085 kb on - strand at 2759.085 kb on - strand at 2759.341 kb on - strand, within A4249_RS13650 at 2759.759 kb on - strand at 2759.759 kb on - strand at 2759.811 kb on + strand at 2759.812 kb on - strand at 2759.812 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C) remove 2,757,764 + A4249_RS13640 0.63 +0.5 2,757,766 + A4249_RS13640 0.63 +0.1 2,757,766 + A4249_RS13640 0.63 +1.6 2,757,766 + A4249_RS13640 0.63 +0.8 2,757,766 + A4249_RS13640 0.63 -0.8 2,757,766 + A4249_RS13640 0.63 +1.4 2,757,767 - A4249_RS13640 0.63 +0.5 2,757,767 - A4249_RS13640 0.63 -0.1 2,757,767 - A4249_RS13640 0.63 +1.8 2,757,767 - A4249_RS13640 0.63 +1.7 2,758,954 - +0.7 2,758,954 - +0.5 2,758,954 - -0.1 2,759,018 + +0.3 2,759,018 + +0.6 2,759,018 + -0.1 2,759,018 + -0.2 2,759,018 + +0.7 2,759,018 + -0.6 2,759,018 + -0.1 2,759,018 + +0.1 2,759,018 + +0.4 2,759,018 + +0.4 2,759,018 + -0.3 2,759,018 + -0.8 2,759,019 - +0.4 2,759,019 - +0.1 2,759,019 - +0.9 2,759,019 - +1.0 2,759,030 - -1.0 2,759,059 + -0.3 2,759,085 - +0.5 2,759,085 - -0.4 2,759,341 - A4249_RS13650 0.43 -0.9 2,759,759 - -0.3 2,759,759 - -1.4 2,759,811 + -0.2 2,759,812 - -0.0 2,759,812 - -0.4
Or see this region's nucleotide sequence