Experiment: Guanine 0.6617 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS12370 and A4249_RS12375 are separated by 119 nucleotides A4249_RS12375 and A4249_RS12380 are separated by 3 nucleotides A4249_RS12380 and A4249_RS12385 are separated by 54 nucleotides A4249_RS12385 and A4249_RS12390 are separated by 164 nucleotides
A4249_RS12370: A4249_RS12370 - hypothetical protein, at 2,481,955 to 2,483,163
_RS12370
A4249_RS12375: A4249_RS12375 - hypothetical protein, at 2,483,283 to 2,483,534
_RS12375
A4249_RS12380: A4249_RS12380 - molybdopterin-synthase adenylyltransferase MoeB, at 2,483,538 to 2,484,272
_RS12380
A4249_RS12385: A4249_RS12385 - BLUF domain-containing protein, at 2,484,327 to 2,484,698
_RS12385
A4249_RS12390: A4249_RS12390 - ATP-dependent protease subunit HslV, at 2,484,863 to 2,485,423
_RS12390
Position (kb)
2483
2484
2485 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2482.564 kb on - strand, within A4249_RS12370 at 2482.585 kb on - strand, within A4249_RS12370 at 2482.658 kb on + strand, within A4249_RS12370 at 2482.658 kb on + strand, within A4249_RS12370 at 2482.694 kb on - strand, within A4249_RS12370 at 2483.292 kb on + strand at 2483.292 kb on + strand at 2483.292 kb on + strand at 2483.293 kb on - strand at 2483.293 kb on - strand at 2483.293 kb on - strand at 2483.295 kb on + strand at 2483.295 kb on + strand at 2483.295 kb on + strand at 2483.295 kb on + strand at 2483.295 kb on + strand at 2483.296 kb on - strand at 2483.296 kb on - strand at 2483.296 kb on - strand at 2483.296 kb on - strand at 2483.296 kb on - strand at 2483.421 kb on + strand, within A4249_RS12375 at 2483.421 kb on + strand, within A4249_RS12375 at 2483.422 kb on - strand, within A4249_RS12375 at 2483.422 kb on - strand, within A4249_RS12375 at 2483.422 kb on - strand, within A4249_RS12375 at 2483.422 kb on - strand, within A4249_RS12375 at 2483.427 kb on + strand, within A4249_RS12375 at 2483.428 kb on - strand, within A4249_RS12375 at 2484.278 kb on + strand at 2484.278 kb on + strand at 2484.278 kb on + strand at 2484.278 kb on + strand at 2484.278 kb on + strand at 2484.279 kb on - strand at 2484.282 kb on + strand at 2484.282 kb on + strand at 2484.282 kb on + strand at 2484.282 kb on + strand at 2484.283 kb on - strand at 2484.503 kb on + strand, within A4249_RS12385 at 2484.777 kb on - strand at 2484.798 kb on - strand at 2484.808 kb on + strand at 2485.101 kb on - strand, within A4249_RS12390 at 2485.160 kb on + strand, within A4249_RS12390 at 2485.161 kb on - strand, within A4249_RS12390 at 2485.161 kb on - strand, within A4249_RS12390 at 2485.250 kb on + strand, within A4249_RS12390 at 2485.250 kb on + strand, within A4249_RS12390 at 2485.250 kb on + strand, within A4249_RS12390 at 2485.251 kb on - strand, within A4249_RS12390 at 2485.251 kb on - strand, within A4249_RS12390
Per-strain Table
Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C) remove 2,482,564 - A4249_RS12370 0.50 +0.4 2,482,585 - A4249_RS12370 0.52 +0.4 2,482,658 + A4249_RS12370 0.58 +0.6 2,482,658 + A4249_RS12370 0.58 +0.9 2,482,694 - A4249_RS12370 0.61 +0.5 2,483,292 + +2.7 2,483,292 + +0.0 2,483,292 + -0.7 2,483,293 - -1.1 2,483,293 - -0.1 2,483,293 - -0.6 2,483,295 + +1.1 2,483,295 + +0.7 2,483,295 + -2.4 2,483,295 + +0.2 2,483,295 + +0.6 2,483,296 - +0.5 2,483,296 - -0.6 2,483,296 - +0.6 2,483,296 - -0.3 2,483,296 - -0.7 2,483,421 + A4249_RS12375 0.55 -0.0 2,483,421 + A4249_RS12375 0.55 +0.0 2,483,422 - A4249_RS12375 0.55 -1.5 2,483,422 - A4249_RS12375 0.55 +0.1 2,483,422 - A4249_RS12375 0.55 +0.5 2,483,422 - A4249_RS12375 0.55 +0.3 2,483,427 + A4249_RS12375 0.57 +0.0 2,483,428 - A4249_RS12375 0.58 -2.8 2,484,278 + -1.2 2,484,278 + -0.8 2,484,278 + +0.1 2,484,278 + -0.7 2,484,278 + -0.8 2,484,279 - -1.0 2,484,282 + +0.0 2,484,282 + +0.8 2,484,282 + -0.2 2,484,282 + +1.5 2,484,283 - +0.3 2,484,503 + A4249_RS12385 0.47 +0.3 2,484,777 - -0.6 2,484,798 - -0.4 2,484,808 + -0.3 2,485,101 - A4249_RS12390 0.42 +0.2 2,485,160 + A4249_RS12390 0.53 -1.9 2,485,161 - A4249_RS12390 0.53 +0.0 2,485,161 - A4249_RS12390 0.53 -1.8 2,485,250 + A4249_RS12390 0.69 +0.7 2,485,250 + A4249_RS12390 0.69 +1.0 2,485,250 + A4249_RS12390 0.69 +0.3 2,485,251 - A4249_RS12390 0.69 +2.0 2,485,251 - A4249_RS12390 0.69 -0.6
Or see this region's nucleotide sequence