Experiment: Guanine 0.6617 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS12320 and A4249_RS12325 are separated by 57 nucleotides A4249_RS12325 and A4249_RS12330 overlap by 1 nucleotides A4249_RS12330 and A4249_RS12335 are separated by 18 nucleotides A4249_RS12335 and A4249_RS12340 overlap by 1 nucleotides
A4249_RS12320: A4249_RS12320 - acyl-CoA thioesterase, at 2,474,061 to 2,474,462
_RS12320
A4249_RS12325: A4249_RS12325 - peptide deformylase, at 2,474,520 to 2,475,095
_RS12325
A4249_RS12330: A4249_RS12330 - hypothetical protein, at 2,475,095 to 2,475,373
_RS12330
A4249_RS12335: A4249_RS12335 - methionyl-tRNA formyltransferase, at 2,475,392 to 2,476,315
_RS12335
A4249_RS12340: A4249_RS12340 - tRNA pseudouridine(38-40) synthase TruA, at 2,476,315 to 2,477,058
_RS12340
Position (kb)
2475
2476 Strain fitness (log2 ratio)
-1
0
1
2 at 2474.292 kb on + strand, within A4249_RS12320 at 2474.292 kb on + strand, within A4249_RS12320 at 2474.292 kb on + strand, within A4249_RS12320 at 2474.292 kb on + strand, within A4249_RS12320 at 2474.293 kb on - strand, within A4249_RS12320 at 2474.293 kb on - strand, within A4249_RS12320 at 2474.409 kb on + strand, within A4249_RS12320 at 2474.409 kb on + strand, within A4249_RS12320 at 2474.409 kb on + strand, within A4249_RS12320 at 2474.409 kb on + strand, within A4249_RS12320 at 2474.409 kb on + strand, within A4249_RS12320 at 2474.409 kb on + strand, within A4249_RS12320 at 2474.410 kb on - strand, within A4249_RS12320 at 2474.410 kb on - strand, within A4249_RS12320 at 2474.410 kb on - strand, within A4249_RS12320 at 2474.410 kb on - strand, within A4249_RS12320 at 2474.410 kb on - strand, within A4249_RS12320 at 2474.410 kb on - strand, within A4249_RS12320 at 2474.460 kb on + strand at 2474.460 kb on + strand at 2474.460 kb on + strand at 2474.461 kb on - strand at 2474.461 kb on - strand at 2474.461 kb on - strand at 2475.121 kb on + strand at 2475.121 kb on + strand at 2475.121 kb on + strand at 2475.121 kb on + strand at 2475.121 kb on + strand at 2475.121 kb on + strand at 2475.122 kb on - strand at 2475.122 kb on - strand at 2475.122 kb on - strand at 2475.122 kb on - strand at 2475.122 kb on - strand at 2475.123 kb on + strand, within A4249_RS12330 at 2475.123 kb on + strand, within A4249_RS12330 at 2475.123 kb on + strand, within A4249_RS12330 at 2475.124 kb on - strand, within A4249_RS12330 at 2475.124 kb on - strand, within A4249_RS12330 at 2475.124 kb on - strand, within A4249_RS12330 at 2475.371 kb on + strand at 2476.324 kb on + strand at 2476.324 kb on + strand at 2476.324 kb on + strand at 2476.325 kb on - strand at 2476.343 kb on - strand at 2476.357 kb on + strand at 2476.357 kb on + strand at 2476.357 kb on + strand at 2476.358 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C) remove 2,474,292 + A4249_RS12320 0.57 +0.5 2,474,292 + A4249_RS12320 0.57 +0.7 2,474,292 + A4249_RS12320 0.57 -0.5 2,474,292 + A4249_RS12320 0.57 -0.5 2,474,293 - A4249_RS12320 0.58 +0.7 2,474,293 - A4249_RS12320 0.58 -0.3 2,474,409 + A4249_RS12320 0.87 -0.3 2,474,409 + A4249_RS12320 0.87 -0.1 2,474,409 + A4249_RS12320 0.87 -0.1 2,474,409 + A4249_RS12320 0.87 +0.5 2,474,409 + A4249_RS12320 0.87 +0.5 2,474,409 + A4249_RS12320 0.87 +0.8 2,474,410 - A4249_RS12320 0.87 -0.9 2,474,410 - A4249_RS12320 0.87 -0.1 2,474,410 - A4249_RS12320 0.87 -0.5 2,474,410 - A4249_RS12320 0.87 +0.1 2,474,410 - A4249_RS12320 0.87 -0.1 2,474,410 - A4249_RS12320 0.87 -1.2 2,474,460 + +1.0 2,474,460 + +1.6 2,474,460 + -0.5 2,474,461 - -0.8 2,474,461 - +0.0 2,474,461 - +0.3 2,475,121 + -0.0 2,475,121 + -0.1 2,475,121 + +0.7 2,475,121 + -0.1 2,475,121 + -0.6 2,475,121 + -0.1 2,475,122 - -0.4 2,475,122 - -1.7 2,475,122 - -0.4 2,475,122 - -0.8 2,475,122 - -0.1 2,475,123 + A4249_RS12330 0.10 -0.4 2,475,123 + A4249_RS12330 0.10 -0.7 2,475,123 + A4249_RS12330 0.10 +0.0 2,475,124 - A4249_RS12330 0.10 +1.0 2,475,124 - A4249_RS12330 0.10 -0.2 2,475,124 - A4249_RS12330 0.10 -0.9 2,475,371 + +1.4 2,476,324 + -1.3 2,476,324 + +0.0 2,476,324 + +0.1 2,476,325 - +0.7 2,476,343 - -0.1 2,476,357 + -0.7 2,476,357 + +0.5 2,476,357 + +0.1 2,476,358 - +2.0
Or see this region's nucleotide sequence