Experiment: Guanine 0.6617 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10220 and A4249_RS10225 are separated by 707 nucleotides A4249_RS10225 and A4249_RS10230 are separated by 44 nucleotides
A4249_RS10220: A4249_RS10220 - PAS domain S-box protein, at 2,049,073 to 2,051,967
_RS10220
A4249_RS10225: A4249_RS10225 - energy transducer TonB, at 2,052,675 to 2,053,841
_RS10225
A4249_RS10230: A4249_RS10230 - ABC transporter substrate-binding protein, at 2,053,886 to 2,054,926
_RS10230
Position (kb)
2052
2053
2054 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2051.687 kb on + strand at 2051.687 kb on + strand at 2051.687 kb on + strand at 2051.687 kb on + strand at 2051.687 kb on + strand at 2051.688 kb on - strand at 2051.688 kb on - strand at 2051.688 kb on - strand at 2051.726 kb on + strand at 2051.727 kb on - strand at 2051.750 kb on + strand at 2051.750 kb on + strand at 2051.750 kb on + strand at 2051.750 kb on + strand at 2051.750 kb on + strand at 2051.751 kb on - strand at 2051.828 kb on + strand at 2051.828 kb on + strand at 2051.828 kb on + strand at 2051.828 kb on + strand at 2051.829 kb on - strand at 2051.829 kb on - strand at 2051.928 kb on + strand at 2051.934 kb on + strand at 2051.934 kb on + strand at 2051.934 kb on + strand at 2051.935 kb on - strand at 2051.935 kb on - strand at 2051.935 kb on - strand at 2051.938 kb on + strand at 2051.938 kb on + strand at 2051.938 kb on + strand at 2051.938 kb on + strand at 2051.938 kb on + strand at 2051.938 kb on + strand at 2051.938 kb on + strand at 2051.938 kb on + strand at 2051.938 kb on + strand at 2051.939 kb on - strand at 2051.939 kb on - strand at 2051.939 kb on - strand at 2051.949 kb on + strand at 2051.950 kb on - strand at 2052.054 kb on + strand at 2052.054 kb on + strand at 2052.054 kb on + strand at 2052.054 kb on + strand at 2052.055 kb on - strand at 2052.055 kb on - strand at 2052.062 kb on + strand at 2052.063 kb on - strand at 2052.063 kb on - strand at 2052.063 kb on - strand at 2052.199 kb on - strand at 2052.199 kb on - strand at 2052.199 kb on - strand at 2052.322 kb on + strand at 2052.322 kb on + strand at 2052.323 kb on - strand at 2052.419 kb on + strand at 2052.420 kb on - strand at 2052.420 kb on - strand at 2052.460 kb on + strand at 2052.461 kb on - strand at 2052.461 kb on - strand at 2052.461 kb on - strand at 2052.625 kb on + strand at 2052.830 kb on + strand, within A4249_RS10225 at 2052.831 kb on - strand, within A4249_RS10225 at 2052.866 kb on + strand, within A4249_RS10225 at 2052.866 kb on + strand, within A4249_RS10225 at 2052.867 kb on - strand, within A4249_RS10225 at 2052.867 kb on - strand, within A4249_RS10225 at 2052.971 kb on + strand, within A4249_RS10225 at 2052.971 kb on + strand, within A4249_RS10225 at 2052.971 kb on + strand, within A4249_RS10225 at 2052.972 kb on - strand, within A4249_RS10225 at 2052.972 kb on - strand, within A4249_RS10225 at 2053.128 kb on + strand, within A4249_RS10225 at 2053.128 kb on + strand, within A4249_RS10225 at 2053.129 kb on - strand, within A4249_RS10225 at 2053.129 kb on - strand, within A4249_RS10225 at 2053.249 kb on - strand, within A4249_RS10225 at 2053.257 kb on + strand, within A4249_RS10225 at 2053.258 kb on - strand, within A4249_RS10225 at 2053.258 kb on - strand, within A4249_RS10225 at 2053.370 kb on + strand, within A4249_RS10225 at 2053.370 kb on + strand, within A4249_RS10225 at 2053.371 kb on - strand, within A4249_RS10225 at 2053.371 kb on - strand, within A4249_RS10225 at 2053.371 kb on - strand, within A4249_RS10225 at 2053.458 kb on + strand, within A4249_RS10225 at 2053.458 kb on + strand, within A4249_RS10225 at 2053.458 kb on + strand, within A4249_RS10225 at 2053.459 kb on - strand, within A4249_RS10225 at 2053.459 kb on - strand, within A4249_RS10225 at 2053.576 kb on - strand, within A4249_RS10225 at 2053.660 kb on + strand, within A4249_RS10225 at 2053.660 kb on + strand, within A4249_RS10225 at 2053.660 kb on + strand, within A4249_RS10225 at 2053.660 kb on + strand, within A4249_RS10225 at 2053.661 kb on - strand, within A4249_RS10225 at 2053.661 kb on - strand, within A4249_RS10225 at 2053.661 kb on - strand, within A4249_RS10225 at 2053.661 kb on - strand, within A4249_RS10225 at 2053.661 kb on - strand, within A4249_RS10225 at 2053.661 kb on - strand, within A4249_RS10225 at 2053.661 kb on - strand, within A4249_RS10225 at 2053.765 kb on + strand at 2053.765 kb on + strand at 2053.765 kb on + strand at 2053.766 kb on - strand at 2053.766 kb on - strand at 2053.766 kb on - strand at 2053.779 kb on + strand at 2053.779 kb on + strand at 2053.779 kb on + strand at 2053.779 kb on + strand at 2053.780 kb on - strand at 2053.780 kb on - strand at 2053.780 kb on - strand at 2053.780 kb on - strand at 2053.780 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C) remove 2,051,687 + +0.0 2,051,687 + -0.3 2,051,687 + +0.2 2,051,687 + +1.2 2,051,687 + -0.5 2,051,688 - +0.4 2,051,688 - -0.1 2,051,688 - +0.0 2,051,726 + +0.8 2,051,727 - -0.1 2,051,750 + -0.1 2,051,750 + -0.2 2,051,750 + +0.6 2,051,750 + +1.0 2,051,750 + +0.3 2,051,751 - -0.4 2,051,828 + -0.0 2,051,828 + -1.7 2,051,828 + +0.1 2,051,828 + +1.0 2,051,829 - -1.9 2,051,829 - +0.7 2,051,928 + -0.1 2,051,934 + -1.1 2,051,934 + -0.1 2,051,934 + +1.6 2,051,935 - +0.0 2,051,935 - -1.2 2,051,935 - -0.6 2,051,938 + -1.0 2,051,938 + -0.8 2,051,938 + -0.4 2,051,938 + +0.2 2,051,938 + +0.4 2,051,938 + +0.7 2,051,938 + -1.1 2,051,938 + -0.2 2,051,938 + +0.3 2,051,939 - -0.4 2,051,939 - +0.2 2,051,939 - -0.1 2,051,949 + -1.6 2,051,950 - +1.2 2,052,054 + -0.3 2,052,054 + +0.3 2,052,054 + +0.3 2,052,054 + -0.1 2,052,055 - +0.1 2,052,055 - +0.0 2,052,062 + -0.2 2,052,063 - +0.1 2,052,063 - -0.5 2,052,063 - -0.2 2,052,199 - +0.4 2,052,199 - +0.2 2,052,199 - +0.2 2,052,322 + -0.0 2,052,322 + +0.2 2,052,323 - +0.2 2,052,419 + +0.2 2,052,420 - -0.2 2,052,420 - +0.6 2,052,460 + +0.6 2,052,461 - +0.6 2,052,461 - +0.5 2,052,461 - -0.9 2,052,625 + +0.3 2,052,830 + A4249_RS10225 0.13 -0.2 2,052,831 - A4249_RS10225 0.13 +0.7 2,052,866 + A4249_RS10225 0.16 -0.3 2,052,866 + A4249_RS10225 0.16 +0.1 2,052,867 - A4249_RS10225 0.16 +0.5 2,052,867 - A4249_RS10225 0.16 -0.3 2,052,971 + A4249_RS10225 0.25 -0.4 2,052,971 + A4249_RS10225 0.25 -0.2 2,052,971 + A4249_RS10225 0.25 -0.7 2,052,972 - A4249_RS10225 0.25 +1.1 2,052,972 - A4249_RS10225 0.25 -0.2 2,053,128 + A4249_RS10225 0.39 -0.9 2,053,128 + A4249_RS10225 0.39 -0.9 2,053,129 - A4249_RS10225 0.39 +0.4 2,053,129 - A4249_RS10225 0.39 +0.2 2,053,249 - A4249_RS10225 0.49 -0.7 2,053,257 + A4249_RS10225 0.50 -1.8 2,053,258 - A4249_RS10225 0.50 -0.2 2,053,258 - A4249_RS10225 0.50 -1.3 2,053,370 + A4249_RS10225 0.60 +1.0 2,053,370 + A4249_RS10225 0.60 +1.9 2,053,371 - A4249_RS10225 0.60 +0.2 2,053,371 - A4249_RS10225 0.60 +0.7 2,053,371 - A4249_RS10225 0.60 -0.4 2,053,458 + A4249_RS10225 0.67 +0.3 2,053,458 + A4249_RS10225 0.67 -0.7 2,053,458 + A4249_RS10225 0.67 -0.1 2,053,459 - A4249_RS10225 0.67 -0.2 2,053,459 - A4249_RS10225 0.67 +0.0 2,053,576 - A4249_RS10225 0.77 -0.2 2,053,660 + A4249_RS10225 0.84 +0.6 2,053,660 + A4249_RS10225 0.84 -0.4 2,053,660 + A4249_RS10225 0.84 -0.5 2,053,660 + A4249_RS10225 0.84 +1.8 2,053,661 - A4249_RS10225 0.84 -0.7 2,053,661 - A4249_RS10225 0.84 -0.2 2,053,661 - A4249_RS10225 0.84 -0.5 2,053,661 - A4249_RS10225 0.84 +0.5 2,053,661 - A4249_RS10225 0.84 +1.0 2,053,661 - A4249_RS10225 0.84 +0.1 2,053,661 - A4249_RS10225 0.84 -0.9 2,053,765 + -0.2 2,053,765 + -0.1 2,053,765 + -1.6 2,053,766 - -0.7 2,053,766 - +0.1 2,053,766 - -1.3 2,053,779 + +0.1 2,053,779 + +0.8 2,053,779 + +0.1 2,053,779 + -0.3 2,053,780 - +0.3 2,053,780 - +1.2 2,053,780 - -0.1 2,053,780 - +0.3 2,053,780 - -0.2
Or see this region's nucleotide sequence