Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS07735

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS07730 and A4249_RS07735 are separated by 118 nucleotidesA4249_RS07735 and A4249_RS07740 are separated by 4 nucleotides A4249_RS07730: A4249_RS07730 - TonB-dependent receptor, at 1,542,839 to 1,545,595 _RS07730 A4249_RS07735: A4249_RS07735 - altronate dehydratase family protein, at 1,545,714 to 1,547,213 _RS07735 A4249_RS07740: A4249_RS07740 - mannitol dehydrogenase family protein, at 1,547,218 to 1,548,687 _RS07740 Position (kb) 1545 1546 1547 1548Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1544.717 kb on + strand, within A4249_RS07730at 1544.717 kb on + strand, within A4249_RS07730at 1544.717 kb on + strand, within A4249_RS07730at 1544.718 kb on - strand, within A4249_RS07730at 1544.718 kb on - strand, within A4249_RS07730at 1544.718 kb on - strand, within A4249_RS07730at 1544.723 kb on + strand, within A4249_RS07730at 1544.723 kb on + strand, within A4249_RS07730at 1544.723 kb on + strand, within A4249_RS07730at 1544.723 kb on + strand, within A4249_RS07730at 1544.723 kb on + strand, within A4249_RS07730at 1544.724 kb on - strand, within A4249_RS07730at 1544.724 kb on - strand, within A4249_RS07730at 1544.724 kb on - strand, within A4249_RS07730at 1544.724 kb on - strand, within A4249_RS07730at 1544.724 kb on - strand, within A4249_RS07730at 1544.724 kb on - strand, within A4249_RS07730at 1544.744 kb on + strand, within A4249_RS07730at 1544.744 kb on + strand, within A4249_RS07730at 1544.744 kb on + strand, within A4249_RS07730at 1544.894 kb on + strand, within A4249_RS07730at 1544.933 kb on + strand, within A4249_RS07730at 1544.933 kb on + strand, within A4249_RS07730at 1544.933 kb on + strand, within A4249_RS07730at 1544.933 kb on + strand, within A4249_RS07730at 1544.933 kb on + strand, within A4249_RS07730at 1544.933 kb on + strand, within A4249_RS07730at 1544.933 kb on + strand, within A4249_RS07730at 1544.933 kb on + strand, within A4249_RS07730at 1544.934 kb on - strand, within A4249_RS07730at 1544.934 kb on - strand, within A4249_RS07730at 1544.934 kb on - strand, within A4249_RS07730at 1544.934 kb on - strand, within A4249_RS07730at 1544.934 kb on - strand, within A4249_RS07730at 1544.954 kb on + strand, within A4249_RS07730at 1544.954 kb on + strand, within A4249_RS07730at 1544.954 kb on + strand, within A4249_RS07730at 1544.955 kb on - strand, within A4249_RS07730at 1544.955 kb on - strand, within A4249_RS07730at 1544.955 kb on - strand, within A4249_RS07730at 1544.955 kb on - strand, within A4249_RS07730at 1544.955 kb on - strand, within A4249_RS07730at 1544.955 kb on - strand, within A4249_RS07730at 1544.955 kb on - strand, within A4249_RS07730at 1544.955 kb on - strand, within A4249_RS07730at 1544.993 kb on + strand, within A4249_RS07730at 1544.994 kb on - strand, within A4249_RS07730at 1544.994 kb on - strand, within A4249_RS07730at 1545.013 kb on + strand, within A4249_RS07730at 1545.013 kb on + strand, within A4249_RS07730at 1545.014 kb on - strand, within A4249_RS07730at 1545.014 kb on - strand, within A4249_RS07730at 1545.041 kb on + strand, within A4249_RS07730at 1545.042 kb on - strand, within A4249_RS07730at 1545.042 kb on - strand, within A4249_RS07730at 1545.161 kb on + strand, within A4249_RS07730at 1545.311 kb on + strand, within A4249_RS07730at 1545.311 kb on + strand, within A4249_RS07730at 1545.311 kb on + strand, within A4249_RS07730at 1545.311 kb on + strand, within A4249_RS07730at 1545.311 kb on + strand, within A4249_RS07730at 1545.311 kb on + strand, within A4249_RS07730at 1545.311 kb on + strand, within A4249_RS07730at 1545.311 kb on + strand, within A4249_RS07730at 1545.311 kb on + strand, within A4249_RS07730at 1545.311 kb on + strand, within A4249_RS07730at 1545.311 kb on + strand, within A4249_RS07730at 1545.311 kb on + strand, within A4249_RS07730at 1545.312 kb on - strand, within A4249_RS07730at 1545.312 kb on - strand, within A4249_RS07730at 1545.312 kb on - strand, within A4249_RS07730at 1545.312 kb on - strand, within A4249_RS07730at 1545.312 kb on - strand, within A4249_RS07730at 1545.312 kb on - strand, within A4249_RS07730at 1545.312 kb on - strand, within A4249_RS07730at 1545.314 kb on + strand, within A4249_RS07730at 1545.314 kb on + strand, within A4249_RS07730at 1545.314 kb on + strand, within A4249_RS07730at 1545.314 kb on + strand, within A4249_RS07730at 1545.314 kb on + strand, within A4249_RS07730at 1545.314 kb on + strand, within A4249_RS07730at 1545.314 kb on + strand, within A4249_RS07730at 1545.315 kb on - strand, within A4249_RS07730at 1545.365 kb on + strandat 1545.365 kb on + strandat 1545.365 kb on + strandat 1545.365 kb on + strandat 1545.365 kb on + strandat 1545.366 kb on - strandat 1545.366 kb on - strandat 1545.366 kb on - strandat 1545.366 kb on - strandat 1545.446 kb on + strandat 1545.446 kb on + strandat 1545.446 kb on + strandat 1545.447 kb on - strandat 1545.504 kb on - strandat 1545.504 kb on - strandat 1545.504 kb on - strandat 1545.504 kb on - strandat 1545.504 kb on - strandat 1545.515 kb on + strandat 1545.515 kb on + strandat 1545.515 kb on + strandat 1545.516 kb on - strandat 1545.516 kb on - strandat 1545.516 kb on - strandat 1545.545 kb on + strandat 1545.590 kb on + strandat 1545.590 kb on + strandat 1545.590 kb on + strandat 1545.590 kb on + strandat 1545.591 kb on - strandat 1545.591 kb on - strandat 1545.629 kb on + strandat 1545.629 kb on + strandat 1545.629 kb on + strandat 1545.629 kb on + strandat 1545.629 kb on + strandat 1545.629 kb on + strandat 1545.630 kb on - strandat 1545.630 kb on - strandat 1545.630 kb on - strandat 1545.630 kb on - strandat 1545.630 kb on - strandat 1545.630 kb on - strandat 1545.666 kb on + strandat 1545.667 kb on - strandat 1545.715 kb on + strandat 1545.715 kb on + strandat 1545.715 kb on + strandat 1545.715 kb on + strandat 1545.716 kb on - strandat 1545.716 kb on - strandat 1545.716 kb on - strandat 1545.721 kb on + strandat 1545.721 kb on + strandat 1545.721 kb on + strandat 1545.721 kb on + strandat 1545.722 kb on - strandat 1545.722 kb on - strandat 1546.219 kb on + strand, within A4249_RS07735at 1546.219 kb on + strand, within A4249_RS07735at 1546.220 kb on - strand, within A4249_RS07735at 1546.220 kb on - strand, within A4249_RS07735at 1546.407 kb on - strand, within A4249_RS07735at 1546.488 kb on + strand, within A4249_RS07735at 1546.488 kb on + strand, within A4249_RS07735at 1546.488 kb on + strand, within A4249_RS07735at 1546.489 kb on - strand, within A4249_RS07735at 1546.672 kb on + strand, within A4249_RS07735at 1546.853 kb on + strand, within A4249_RS07735at 1546.853 kb on + strand, within A4249_RS07735at 1546.853 kb on + strand, within A4249_RS07735at 1546.853 kb on + strand, within A4249_RS07735at 1546.853 kb on + strand, within A4249_RS07735at 1546.853 kb on + strand, within A4249_RS07735at 1546.854 kb on - strand, within A4249_RS07735at 1546.854 kb on - strand, within A4249_RS07735at 1546.854 kb on - strand, within A4249_RS07735at 1546.854 kb on - strand, within A4249_RS07735at 1546.854 kb on - strand, within A4249_RS07735at 1546.854 kb on - strand, within A4249_RS07735at 1546.855 kb on + strand, within A4249_RS07735at 1546.855 kb on + strand, within A4249_RS07735at 1546.855 kb on + strand, within A4249_RS07735at 1546.855 kb on + strand, within A4249_RS07735at 1546.855 kb on + strand, within A4249_RS07735at 1546.855 kb on + strand, within A4249_RS07735at 1546.855 kb on + strand, within A4249_RS07735at 1546.855 kb on + strand, within A4249_RS07735at 1546.855 kb on + strand, within A4249_RS07735at 1546.855 kb on + strand, within A4249_RS07735at 1546.855 kb on + strand, within A4249_RS07735at 1546.855 kb on + strand, within A4249_RS07735at 1546.855 kb on + strand, within A4249_RS07735at 1546.855 kb on + strand, within A4249_RS07735at 1546.855 kb on + strand, within A4249_RS07735at 1546.855 kb on + strand, within A4249_RS07735at 1546.856 kb on - strand, within A4249_RS07735at 1546.856 kb on - strand, within A4249_RS07735at 1546.856 kb on - strand, within A4249_RS07735at 1546.856 kb on - strand, within A4249_RS07735at 1546.856 kb on - strand, within A4249_RS07735at 1546.856 kb on - strand, within A4249_RS07735at 1546.856 kb on - strand, within A4249_RS07735at 1546.856 kb on - strand, within A4249_RS07735at 1546.856 kb on - strand, within A4249_RS07735at 1546.856 kb on - strand, within A4249_RS07735at 1546.856 kb on - strand, within A4249_RS07735at 1546.856 kb on - strand, within A4249_RS07735at 1546.856 kb on - strand, within A4249_RS07735at 1546.856 kb on - strand, within A4249_RS07735at 1546.856 kb on - strand, within A4249_RS07735at 1546.856 kb on - strand, within A4249_RS07735at 1547.141 kb on + strandat 1547.273 kb on + strandat 1547.273 kb on + strandat 1547.273 kb on + strandat 1547.273 kb on + strandat 1547.273 kb on + strandat 1547.273 kb on + strandat 1547.273 kb on + strandat 1547.274 kb on - strandat 1547.274 kb on - strandat 1547.274 kb on - strandat 1547.274 kb on - strandat 1547.274 kb on - strandat 1547.284 kb on - strandat 1547.494 kb on - strand, within A4249_RS07740at 1547.639 kb on + strand, within A4249_RS07740at 1547.726 kb on - strand, within A4249_RS07740at 1547.774 kb on + strand, within A4249_RS07740at 1547.774 kb on + strand, within A4249_RS07740at 1547.774 kb on + strand, within A4249_RS07740at 1547.774 kb on + strand, within A4249_RS07740at 1547.775 kb on - strand, within A4249_RS07740

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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1,544,717 + A4249_RS07730 0.68 +0.5
1,544,717 + A4249_RS07730 0.68 +0.4
1,544,717 + A4249_RS07730 0.68 +0.4
1,544,718 - A4249_RS07730 0.68 +1.0
1,544,718 - A4249_RS07730 0.68 +0.8
1,544,718 - A4249_RS07730 0.68 -2.0
1,544,723 + A4249_RS07730 0.68 -0.0
1,544,723 + A4249_RS07730 0.68 +1.2
1,544,723 + A4249_RS07730 0.68 -1.8
1,544,723 + A4249_RS07730 0.68 +1.3
1,544,723 + A4249_RS07730 0.68 +0.1
1,544,724 - A4249_RS07730 0.68 -1.5
1,544,724 - A4249_RS07730 0.68 -0.5
1,544,724 - A4249_RS07730 0.68 +0.1
1,544,724 - A4249_RS07730 0.68 -0.1
1,544,724 - A4249_RS07730 0.68 +0.3
1,544,724 - A4249_RS07730 0.68 +0.2
1,544,744 + A4249_RS07730 0.69 -2.3
1,544,744 + A4249_RS07730 0.69 +0.5
1,544,744 + A4249_RS07730 0.69 +0.5
1,544,894 + A4249_RS07730 0.75 -0.4
1,544,933 + A4249_RS07730 0.76 +1.3
1,544,933 + A4249_RS07730 0.76 +0.1
1,544,933 + A4249_RS07730 0.76 +0.9
1,544,933 + A4249_RS07730 0.76 +0.8
1,544,933 + A4249_RS07730 0.76 -2.2
1,544,933 + A4249_RS07730 0.76 +0.3
1,544,933 + A4249_RS07730 0.76 -0.0
1,544,933 + A4249_RS07730 0.76 +0.1
1,544,934 - A4249_RS07730 0.76 +0.7
1,544,934 - A4249_RS07730 0.76 +0.9
1,544,934 - A4249_RS07730 0.76 +0.8
1,544,934 - A4249_RS07730 0.76 +0.7
1,544,934 - A4249_RS07730 0.76 -0.1
1,544,954 + A4249_RS07730 0.77 -1.8
1,544,954 + A4249_RS07730 0.77 +0.3
1,544,954 + A4249_RS07730 0.77 +0.4
1,544,955 - A4249_RS07730 0.77 +0.2
1,544,955 - A4249_RS07730 0.77 +0.4
1,544,955 - A4249_RS07730 0.77 -0.3
1,544,955 - A4249_RS07730 0.77 +0.3
1,544,955 - A4249_RS07730 0.77 +0.2
1,544,955 - A4249_RS07730 0.77 -0.6
1,544,955 - A4249_RS07730 0.77 -0.9
1,544,955 - A4249_RS07730 0.77 +0.6
1,544,993 + A4249_RS07730 0.78 +1.1
1,544,994 - A4249_RS07730 0.78 +0.2
1,544,994 - A4249_RS07730 0.78 -0.2
1,545,013 + A4249_RS07730 0.79 -0.1
1,545,013 + A4249_RS07730 0.79 +0.0
1,545,014 - A4249_RS07730 0.79 -0.1
1,545,014 - A4249_RS07730 0.79 -0.6
1,545,041 + A4249_RS07730 0.80 +0.1
1,545,042 - A4249_RS07730 0.80 -1.6
1,545,042 - A4249_RS07730 0.80 +0.5
1,545,161 + A4249_RS07730 0.84 -0.2
1,545,311 + A4249_RS07730 0.90 +0.1
1,545,311 + A4249_RS07730 0.90 -0.3
1,545,311 + A4249_RS07730 0.90 -0.7
1,545,311 + A4249_RS07730 0.90 -0.4
1,545,311 + A4249_RS07730 0.90 +0.2
1,545,311 + A4249_RS07730 0.90 +0.2
1,545,311 + A4249_RS07730 0.90 +0.0
1,545,311 + A4249_RS07730 0.90 -0.2
1,545,311 + A4249_RS07730 0.90 +1.1
1,545,311 + A4249_RS07730 0.90 +0.4
1,545,311 + A4249_RS07730 0.90 -1.5
1,545,311 + A4249_RS07730 0.90 -0.0
1,545,312 - A4249_RS07730 0.90 -0.9
1,545,312 - A4249_RS07730 0.90 +0.5
1,545,312 - A4249_RS07730 0.90 +0.1
1,545,312 - A4249_RS07730 0.90 -0.8
1,545,312 - A4249_RS07730 0.90 +1.3
1,545,312 - A4249_RS07730 0.90 +1.1
1,545,312 - A4249_RS07730 0.90 -0.3
1,545,314 + A4249_RS07730 0.90 -0.7
1,545,314 + A4249_RS07730 0.90 +0.5
1,545,314 + A4249_RS07730 0.90 -0.1
1,545,314 + A4249_RS07730 0.90 -0.2
1,545,314 + A4249_RS07730 0.90 +0.3
1,545,314 + A4249_RS07730 0.90 -0.2
1,545,314 + A4249_RS07730 0.90 -1.3
1,545,315 - A4249_RS07730 0.90 -0.4
1,545,365 + +0.1
1,545,365 + -0.9
1,545,365 + -1.1
1,545,365 + -0.2
1,545,365 + -0.4
1,545,366 - +1.0
1,545,366 - +0.1
1,545,366 - -0.3
1,545,366 - -0.5
1,545,446 + -0.0
1,545,446 + -0.0
1,545,446 + -0.3
1,545,447 - -0.7
1,545,504 - +0.8
1,545,504 - -0.3
1,545,504 - +1.6
1,545,504 - -0.1
1,545,504 - +0.3
1,545,515 + -0.3
1,545,515 + +0.3
1,545,515 + -0.7
1,545,516 - +1.9
1,545,516 - -0.5
1,545,516 - +1.1
1,545,545 + -0.3
1,545,590 + -0.8
1,545,590 + +0.8
1,545,590 + -0.2
1,545,590 + -0.4
1,545,591 - +0.3
1,545,591 - +0.0
1,545,629 + +0.3
1,545,629 + -0.2
1,545,629 + -0.4
1,545,629 + -0.7
1,545,629 + +0.1
1,545,629 + -0.6
1,545,630 - -0.3
1,545,630 - -0.7
1,545,630 - -0.3
1,545,630 - +0.7
1,545,630 - +0.1
1,545,630 - +0.2
1,545,666 + -1.4
1,545,667 - -0.3
1,545,715 + -0.0
1,545,715 + +1.3
1,545,715 + +0.6
1,545,715 + -0.7
1,545,716 - -0.5
1,545,716 - -2.1
1,545,716 - -1.0
1,545,721 + +0.4
1,545,721 + +0.3
1,545,721 + +0.5
1,545,721 + -1.1
1,545,722 - -0.5
1,545,722 - +0.5
1,546,219 + A4249_RS07735 0.34 -1.8
1,546,219 + A4249_RS07735 0.34 -0.1
1,546,220 - A4249_RS07735 0.34 +0.3
1,546,220 - A4249_RS07735 0.34 -0.1
1,546,407 - A4249_RS07735 0.46 -1.1
1,546,488 + A4249_RS07735 0.52 +0.4
1,546,488 + A4249_RS07735 0.52 -0.6
1,546,488 + A4249_RS07735 0.52 -0.7
1,546,489 - A4249_RS07735 0.52 -0.6
1,546,672 + A4249_RS07735 0.64 -0.1
1,546,853 + A4249_RS07735 0.76 +0.8
1,546,853 + A4249_RS07735 0.76 -1.7
1,546,853 + A4249_RS07735 0.76 -0.1
1,546,853 + A4249_RS07735 0.76 +0.1
1,546,853 + A4249_RS07735 0.76 +0.9
1,546,853 + A4249_RS07735 0.76 +0.6
1,546,854 - A4249_RS07735 0.76 -3.1
1,546,854 - A4249_RS07735 0.76 +0.2
1,546,854 - A4249_RS07735 0.76 +0.2
1,546,854 - A4249_RS07735 0.76 -1.1
1,546,854 - A4249_RS07735 0.76 +0.2
1,546,854 - A4249_RS07735 0.76 -0.6
1,546,855 + A4249_RS07735 0.76 +0.8
1,546,855 + A4249_RS07735 0.76 +0.3
1,546,855 + A4249_RS07735 0.76 +1.1
1,546,855 + A4249_RS07735 0.76 -0.5
1,546,855 + A4249_RS07735 0.76 +0.1
1,546,855 + A4249_RS07735 0.76 -0.9
1,546,855 + A4249_RS07735 0.76 +0.9
1,546,855 + A4249_RS07735 0.76 +0.5
1,546,855 + A4249_RS07735 0.76 -0.1
1,546,855 + A4249_RS07735 0.76 +2.1
1,546,855 + A4249_RS07735 0.76 +0.1
1,546,855 + A4249_RS07735 0.76 +2.1
1,546,855 + A4249_RS07735 0.76 +0.1
1,546,855 + A4249_RS07735 0.76 -0.7
1,546,855 + A4249_RS07735 0.76 -0.4
1,546,855 + A4249_RS07735 0.76 -0.1
1,546,856 - A4249_RS07735 0.76 +1.1
1,546,856 - A4249_RS07735 0.76 +1.1
1,546,856 - A4249_RS07735 0.76 +0.5
1,546,856 - A4249_RS07735 0.76 -1.0
1,546,856 - A4249_RS07735 0.76 +0.3
1,546,856 - A4249_RS07735 0.76 -0.0
1,546,856 - A4249_RS07735 0.76 +1.7
1,546,856 - A4249_RS07735 0.76 -0.1
1,546,856 - A4249_RS07735 0.76 -1.0
1,546,856 - A4249_RS07735 0.76 -0.3
1,546,856 - A4249_RS07735 0.76 -0.0
1,546,856 - A4249_RS07735 0.76 -0.5
1,546,856 - A4249_RS07735 0.76 -0.6
1,546,856 - A4249_RS07735 0.76 +0.2
1,546,856 - A4249_RS07735 0.76 -1.3
1,546,856 - A4249_RS07735 0.76 -0.2
1,547,141 + +1.6
1,547,273 + -1.8
1,547,273 + +0.6
1,547,273 + +0.8
1,547,273 + +1.3
1,547,273 + +0.2
1,547,273 + +0.5
1,547,273 + +0.7
1,547,274 - -0.4
1,547,274 - -0.4
1,547,274 - -0.1
1,547,274 - +0.2
1,547,274 - -0.6
1,547,284 - -1.4
1,547,494 - A4249_RS07740 0.19 -0.9
1,547,639 + A4249_RS07740 0.29 +0.8
1,547,726 - A4249_RS07740 0.35 -0.0
1,547,774 + A4249_RS07740 0.38 -0.1
1,547,774 + A4249_RS07740 0.38 -0.1
1,547,774 + A4249_RS07740 0.38 -0.9
1,547,774 + A4249_RS07740 0.38 +0.5
1,547,775 - A4249_RS07740 0.38 -0.9

Or see this region's nucleotide sequence