Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS07145

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS07135 and A4249_RS07140 overlap by 4 nucleotidesA4249_RS07140 and A4249_RS07145 overlap by 1 nucleotidesA4249_RS07145 and A4249_RS07150 overlap by 1 nucleotidesA4249_RS07150 and A4249_RS07155 overlap by 1 nucleotides A4249_RS07135: A4249_RS07135 - hypothetical protein, at 1,431,839 to 1,432,507 _RS07135 A4249_RS07140: A4249_RS07140 - hypothetical protein, at 1,432,504 to 1,432,908 _RS07140 A4249_RS07145: A4249_RS07145 - hypothetical protein, at 1,432,908 to 1,433,531 _RS07145 A4249_RS07150: A4249_RS07150 - hypothetical protein, at 1,433,531 to 1,434,292 _RS07150 A4249_RS07155: A4249_RS07155 - hypothetical protein, at 1,434,292 to 1,437,234 _RS07155 Position (kb) 1432 1433 1434Strain fitness (log2 ratio) -2 -1 0 1 2at 1432.037 kb on + strand, within A4249_RS07135at 1432.037 kb on + strand, within A4249_RS07135at 1432.037 kb on + strand, within A4249_RS07135at 1432.037 kb on + strand, within A4249_RS07135at 1432.037 kb on + strand, within A4249_RS07135at 1432.038 kb on - strand, within A4249_RS07135at 1432.038 kb on - strand, within A4249_RS07135at 1432.038 kb on - strand, within A4249_RS07135at 1432.038 kb on - strand, within A4249_RS07135at 1432.038 kb on - strand, within A4249_RS07135at 1432.208 kb on + strand, within A4249_RS07135at 1432.209 kb on - strand, within A4249_RS07135at 1432.209 kb on - strand, within A4249_RS07135at 1432.361 kb on + strand, within A4249_RS07135at 1432.361 kb on + strand, within A4249_RS07135at 1432.361 kb on + strand, within A4249_RS07135at 1432.361 kb on + strand, within A4249_RS07135at 1432.362 kb on - strand, within A4249_RS07135at 1432.362 kb on - strand, within A4249_RS07135at 1432.362 kb on - strand, within A4249_RS07135at 1432.362 kb on - strand, within A4249_RS07135at 1432.362 kb on - strand, within A4249_RS07135at 1432.362 kb on - strand, within A4249_RS07135at 1432.464 kb on + strandat 1432.464 kb on + strandat 1432.464 kb on + strandat 1432.465 kb on - strandat 1432.485 kb on + strandat 1432.485 kb on + strandat 1432.485 kb on + strandat 1432.485 kb on + strandat 1432.485 kb on + strandat 1432.485 kb on + strandat 1432.486 kb on - strandat 1432.486 kb on - strandat 1432.486 kb on - strandat 1432.486 kb on - strandat 1432.486 kb on - strandat 1432.487 kb on + strandat 1432.487 kb on + strandat 1432.487 kb on + strandat 1432.487 kb on + strandat 1432.488 kb on - strandat 1432.488 kb on - strandat 1432.488 kb on - strandat 1432.488 kb on - strandat 1432.488 kb on - strandat 1432.524 kb on + strandat 1432.744 kb on + strand, within A4249_RS07140at 1432.744 kb on + strand, within A4249_RS07140at 1432.744 kb on + strand, within A4249_RS07140at 1432.805 kb on + strand, within A4249_RS07140at 1432.805 kb on + strand, within A4249_RS07140at 1432.852 kb on + strand, within A4249_RS07140at 1432.852 kb on + strand, within A4249_RS07140at 1432.852 kb on + strand, within A4249_RS07140at 1432.852 kb on + strand, within A4249_RS07140at 1432.852 kb on + strand, within A4249_RS07140at 1432.852 kb on + strand, within A4249_RS07140at 1432.852 kb on + strand, within A4249_RS07140at 1432.852 kb on + strand, within A4249_RS07140at 1432.852 kb on + strand, within A4249_RS07140at 1432.852 kb on + strand, within A4249_RS07140at 1432.852 kb on + strand, within A4249_RS07140at 1432.852 kb on + strand, within A4249_RS07140at 1432.852 kb on + strand, within A4249_RS07140at 1432.852 kb on + strand, within A4249_RS07140at 1432.852 kb on + strand, within A4249_RS07140at 1432.852 kb on + strand, within A4249_RS07140at 1432.852 kb on + strand, within A4249_RS07140at 1432.852 kb on + strand, within A4249_RS07140at 1432.853 kb on - strand, within A4249_RS07140at 1432.853 kb on - strand, within A4249_RS07140at 1432.853 kb on - strand, within A4249_RS07140at 1432.853 kb on - strand, within A4249_RS07140at 1432.853 kb on - strand, within A4249_RS07140at 1432.853 kb on - strand, within A4249_RS07140at 1432.853 kb on - strand, within A4249_RS07140at 1432.853 kb on - strand, within A4249_RS07140at 1432.853 kb on - strand, within A4249_RS07140at 1432.853 kb on - strand, within A4249_RS07140at 1432.853 kb on - strand, within A4249_RS07140at 1432.853 kb on - strand, within A4249_RS07140at 1432.853 kb on - strand, within A4249_RS07140at 1432.853 kb on - strand, within A4249_RS07140at 1432.853 kb on - strand, within A4249_RS07140at 1432.853 kb on - strand, within A4249_RS07140at 1432.853 kb on - strand, within A4249_RS07140at 1432.853 kb on - strand, within A4249_RS07140at 1432.871 kb on - strandat 1432.995 kb on + strand, within A4249_RS07145at 1432.996 kb on - strand, within A4249_RS07145at 1433.268 kb on + strand, within A4249_RS07145at 1433.269 kb on - strand, within A4249_RS07145at 1433.424 kb on + strand, within A4249_RS07145at 1433.498 kb on + strandat 1433.499 kb on - strandat 1433.499 kb on - strandat 1433.499 kb on - strandat 1433.499 kb on - strandat 1433.502 kb on + strandat 1433.502 kb on + strandat 1433.502 kb on + strandat 1433.502 kb on + strandat 1433.502 kb on + strandat 1433.503 kb on - strandat 1433.503 kb on - strandat 1433.503 kb on - strandat 1433.549 kb on + strandat 1433.549 kb on + strandat 1433.549 kb on + strandat 1433.549 kb on + strandat 1433.550 kb on - strandat 1433.651 kb on + strand, within A4249_RS07150at 1433.651 kb on + strand, within A4249_RS07150at 1433.651 kb on + strand, within A4249_RS07150at 1433.651 kb on + strand, within A4249_RS07150at 1433.651 kb on + strand, within A4249_RS07150at 1433.652 kb on - strand, within A4249_RS07150at 1433.652 kb on - strand, within A4249_RS07150at 1433.652 kb on - strand, within A4249_RS07150at 1433.652 kb on - strand, within A4249_RS07150at 1433.652 kb on - strand, within A4249_RS07150at 1433.652 kb on - strand, within A4249_RS07150at 1433.652 kb on - strand, within A4249_RS07150at 1433.652 kb on - strand, within A4249_RS07150at 1433.652 kb on - strand, within A4249_RS07150at 1433.652 kb on - strand, within A4249_RS07150at 1433.652 kb on - strand, within A4249_RS07150at 1433.652 kb on - strand, within A4249_RS07150at 1433.838 kb on + strand, within A4249_RS07150at 1433.838 kb on + strand, within A4249_RS07150at 1433.858 kb on + strand, within A4249_RS07150at 1433.858 kb on + strand, within A4249_RS07150at 1433.858 kb on + strand, within A4249_RS07150at 1433.883 kb on + strand, within A4249_RS07150at 1433.883 kb on + strand, within A4249_RS07150at 1433.883 kb on + strand, within A4249_RS07150at 1433.883 kb on + strand, within A4249_RS07150at 1433.884 kb on - strand, within A4249_RS07150at 1433.884 kb on - strand, within A4249_RS07150at 1433.884 kb on - strand, within A4249_RS07150at 1433.884 kb on - strand, within A4249_RS07150at 1433.917 kb on + strand, within A4249_RS07150at 1433.917 kb on + strand, within A4249_RS07150at 1433.917 kb on + strand, within A4249_RS07150at 1433.917 kb on + strand, within A4249_RS07150at 1433.917 kb on + strand, within A4249_RS07150at 1433.917 kb on + strand, within A4249_RS07150at 1433.917 kb on + strand, within A4249_RS07150at 1433.918 kb on - strand, within A4249_RS07150at 1433.918 kb on - strand, within A4249_RS07150at 1433.918 kb on - strand, within A4249_RS07150at 1433.918 kb on - strand, within A4249_RS07150at 1433.918 kb on - strand, within A4249_RS07150at 1433.918 kb on - strand, within A4249_RS07150at 1433.918 kb on - strand, within A4249_RS07150at 1433.918 kb on - strand, within A4249_RS07150at 1433.918 kb on - strand, within A4249_RS07150at 1433.918 kb on - strand, within A4249_RS07150at 1434.041 kb on + strand, within A4249_RS07150at 1434.041 kb on + strand, within A4249_RS07150at 1434.290 kb on + strandat 1434.291 kb on - strandat 1434.291 kb on - strandat 1434.319 kb on + strandat 1434.319 kb on + strandat 1434.319 kb on + strandat 1434.319 kb on + strandat 1434.319 kb on + strandat 1434.319 kb on + strandat 1434.319 kb on + strandat 1434.319 kb on + strandat 1434.319 kb on + strandat 1434.320 kb on - strandat 1434.320 kb on - strandat 1434.320 kb on - strandat 1434.320 kb on - strandat 1434.320 kb on - strandat 1434.320 kb on - strandat 1434.320 kb on - strandat 1434.320 kb on - strandat 1434.320 kb on - strandat 1434.320 kb on - strandat 1434.320 kb on - strandat 1434.320 kb on - strandat 1434.400 kb on + strandat 1434.400 kb on + strandat 1434.401 kb on - strandat 1434.446 kb on - strandat 1434.464 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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1,432,037 + A4249_RS07135 0.30 +0.4
1,432,037 + A4249_RS07135 0.30 +0.5
1,432,037 + A4249_RS07135 0.30 -0.3
1,432,037 + A4249_RS07135 0.30 -0.1
1,432,037 + A4249_RS07135 0.30 +0.4
1,432,038 - A4249_RS07135 0.30 -0.5
1,432,038 - A4249_RS07135 0.30 -0.6
1,432,038 - A4249_RS07135 0.30 -0.5
1,432,038 - A4249_RS07135 0.30 -0.8
1,432,038 - A4249_RS07135 0.30 +0.5
1,432,208 + A4249_RS07135 0.55 -0.0
1,432,209 - A4249_RS07135 0.55 +0.1
1,432,209 - A4249_RS07135 0.55 -0.3
1,432,361 + A4249_RS07135 0.78 +0.2
1,432,361 + A4249_RS07135 0.78 +0.3
1,432,361 + A4249_RS07135 0.78 +2.0
1,432,361 + A4249_RS07135 0.78 +0.3
1,432,362 - A4249_RS07135 0.78 +0.6
1,432,362 - A4249_RS07135 0.78 -0.7
1,432,362 - A4249_RS07135 0.78 +0.4
1,432,362 - A4249_RS07135 0.78 +0.3
1,432,362 - A4249_RS07135 0.78 +0.6
1,432,362 - A4249_RS07135 0.78 -0.1
1,432,464 + +0.2
1,432,464 + -0.3
1,432,464 + +0.0
1,432,465 - -0.2
1,432,485 + -0.4
1,432,485 + -0.2
1,432,485 + -0.7
1,432,485 + -0.6
1,432,485 + -0.3
1,432,485 + +1.1
1,432,486 - +0.4
1,432,486 - +0.5
1,432,486 - -0.4
1,432,486 - +1.0
1,432,486 - -0.4
1,432,487 + -0.8
1,432,487 + -0.6
1,432,487 + -1.8
1,432,487 + -0.3
1,432,488 - -0.3
1,432,488 - -0.3
1,432,488 - -0.6
1,432,488 - -0.1
1,432,488 - -2.0
1,432,524 + -1.0
1,432,744 + A4249_RS07140 0.59 +0.1
1,432,744 + A4249_RS07140 0.59 -0.4
1,432,744 + A4249_RS07140 0.59 -1.3
1,432,805 + A4249_RS07140 0.74 -2.0
1,432,805 + A4249_RS07140 0.74 +0.6
1,432,852 + A4249_RS07140 0.86 -0.1
1,432,852 + A4249_RS07140 0.86 +0.0
1,432,852 + A4249_RS07140 0.86 -1.3
1,432,852 + A4249_RS07140 0.86 +0.6
1,432,852 + A4249_RS07140 0.86 -1.3
1,432,852 + A4249_RS07140 0.86 -0.1
1,432,852 + A4249_RS07140 0.86 -1.0
1,432,852 + A4249_RS07140 0.86 -0.4
1,432,852 + A4249_RS07140 0.86 +0.6
1,432,852 + A4249_RS07140 0.86 +0.3
1,432,852 + A4249_RS07140 0.86 +0.1
1,432,852 + A4249_RS07140 0.86 -0.9
1,432,852 + A4249_RS07140 0.86 -1.0
1,432,852 + A4249_RS07140 0.86 -0.0
1,432,852 + A4249_RS07140 0.86 -2.1
1,432,852 + A4249_RS07140 0.86 -0.2
1,432,852 + A4249_RS07140 0.86 +0.3
1,432,852 + A4249_RS07140 0.86 -0.0
1,432,853 - A4249_RS07140 0.86 -0.6
1,432,853 - A4249_RS07140 0.86 -1.3
1,432,853 - A4249_RS07140 0.86 -0.6
1,432,853 - A4249_RS07140 0.86 +0.4
1,432,853 - A4249_RS07140 0.86 -0.2
1,432,853 - A4249_RS07140 0.86 -0.3
1,432,853 - A4249_RS07140 0.86 -1.4
1,432,853 - A4249_RS07140 0.86 +1.0
1,432,853 - A4249_RS07140 0.86 -0.5
1,432,853 - A4249_RS07140 0.86 +0.4
1,432,853 - A4249_RS07140 0.86 +0.2
1,432,853 - A4249_RS07140 0.86 -0.6
1,432,853 - A4249_RS07140 0.86 +0.5
1,432,853 - A4249_RS07140 0.86 -1.3
1,432,853 - A4249_RS07140 0.86 +0.4
1,432,853 - A4249_RS07140 0.86 -0.1
1,432,853 - A4249_RS07140 0.86 -1.4
1,432,853 - A4249_RS07140 0.86 -0.0
1,432,871 - +0.7
1,432,995 + A4249_RS07145 0.14 -0.5
1,432,996 - A4249_RS07145 0.14 +1.0
1,433,268 + A4249_RS07145 0.58 -1.1
1,433,269 - A4249_RS07145 0.58 -0.5
1,433,424 + A4249_RS07145 0.83 -0.8
1,433,498 + +0.1
1,433,499 - -0.0
1,433,499 - -0.6
1,433,499 - +0.5
1,433,499 - -0.1
1,433,502 + +0.1
1,433,502 + -0.9
1,433,502 + -0.4
1,433,502 + -0.5
1,433,502 + -0.5
1,433,503 - -0.3
1,433,503 - -0.3
1,433,503 - -0.3
1,433,549 + +0.0
1,433,549 + +0.0
1,433,549 + -0.5
1,433,549 + +0.2
1,433,550 - -0.5
1,433,651 + A4249_RS07150 0.16 -0.9
1,433,651 + A4249_RS07150 0.16 -0.6
1,433,651 + A4249_RS07150 0.16 -0.2
1,433,651 + A4249_RS07150 0.16 -0.9
1,433,651 + A4249_RS07150 0.16 +0.2
1,433,652 - A4249_RS07150 0.16 -0.7
1,433,652 - A4249_RS07150 0.16 -0.3
1,433,652 - A4249_RS07150 0.16 +0.6
1,433,652 - A4249_RS07150 0.16 -0.7
1,433,652 - A4249_RS07150 0.16 -0.3
1,433,652 - A4249_RS07150 0.16 -0.3
1,433,652 - A4249_RS07150 0.16 -0.2
1,433,652 - A4249_RS07150 0.16 -0.8
1,433,652 - A4249_RS07150 0.16 -0.2
1,433,652 - A4249_RS07150 0.16 +1.6
1,433,652 - A4249_RS07150 0.16 +0.1
1,433,652 - A4249_RS07150 0.16 -1.2
1,433,838 + A4249_RS07150 0.40 -0.6
1,433,838 + A4249_RS07150 0.40 -0.5
1,433,858 + A4249_RS07150 0.43 +0.5
1,433,858 + A4249_RS07150 0.43 -0.7
1,433,858 + A4249_RS07150 0.43 -0.1
1,433,883 + A4249_RS07150 0.46 +0.1
1,433,883 + A4249_RS07150 0.46 -0.9
1,433,883 + A4249_RS07150 0.46 +0.1
1,433,883 + A4249_RS07150 0.46 +0.6
1,433,884 - A4249_RS07150 0.46 -0.2
1,433,884 - A4249_RS07150 0.46 -0.5
1,433,884 - A4249_RS07150 0.46 -0.4
1,433,884 - A4249_RS07150 0.46 +0.0
1,433,917 + A4249_RS07150 0.51 -0.2
1,433,917 + A4249_RS07150 0.51 -1.0
1,433,917 + A4249_RS07150 0.51 -0.4
1,433,917 + A4249_RS07150 0.51 -0.0
1,433,917 + A4249_RS07150 0.51 -0.1
1,433,917 + A4249_RS07150 0.51 -0.8
1,433,917 + A4249_RS07150 0.51 -2.0
1,433,918 - A4249_RS07150 0.51 +0.1
1,433,918 - A4249_RS07150 0.51 +0.2
1,433,918 - A4249_RS07150 0.51 -0.7
1,433,918 - A4249_RS07150 0.51 +0.0
1,433,918 - A4249_RS07150 0.51 +0.0
1,433,918 - A4249_RS07150 0.51 +0.0
1,433,918 - A4249_RS07150 0.51 +0.9
1,433,918 - A4249_RS07150 0.51 +0.0
1,433,918 - A4249_RS07150 0.51 +1.0
1,433,918 - A4249_RS07150 0.51 +0.4
1,434,041 + A4249_RS07150 0.67 +0.1
1,434,041 + A4249_RS07150 0.67 +0.3
1,434,290 + -0.5
1,434,291 - -1.0
1,434,291 - +0.3
1,434,319 + -1.7
1,434,319 + -0.8
1,434,319 + +0.4
1,434,319 + -1.0
1,434,319 + -0.4
1,434,319 + -0.8
1,434,319 + -2.6
1,434,319 + +1.0
1,434,319 + -0.5
1,434,320 - +0.9
1,434,320 - -0.9
1,434,320 - +0.0
1,434,320 - -0.6
1,434,320 - -0.0
1,434,320 - -0.1
1,434,320 - -1.7
1,434,320 - -0.6
1,434,320 - -0.6
1,434,320 - -0.0
1,434,320 - +0.8
1,434,320 - +0.1
1,434,400 + +0.7
1,434,400 + +0.4
1,434,401 - -0.9
1,434,446 - -1.2
1,434,464 + -0.5

Or see this region's nucleotide sequence