Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS06620

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS06615 and A4249_RS06620 are separated by 77 nucleotidesA4249_RS06620 and A4249_RS06625 overlap by 4 nucleotides A4249_RS06615: A4249_RS06615 - formimidoylglutamate deiminase, at 1,346,062 to 1,347,438 _RS06615 A4249_RS06620: A4249_RS06620 - N-formylglutamate deformylase, at 1,347,516 to 1,348,334 _RS06620 A4249_RS06625: A4249_RS06625 - urocanate hydratase, at 1,348,331 to 1,349,995 _RS06625 Position (kb) 1347 1348 1349Strain fitness (log2 ratio) -2 -1 0 1at 1346.614 kb on + strand, within A4249_RS06615at 1346.614 kb on + strand, within A4249_RS06615at 1346.614 kb on + strand, within A4249_RS06615at 1346.614 kb on + strand, within A4249_RS06615at 1346.614 kb on + strand, within A4249_RS06615at 1346.614 kb on + strand, within A4249_RS06615at 1346.614 kb on + strand, within A4249_RS06615at 1346.614 kb on + strand, within A4249_RS06615at 1346.614 kb on + strand, within A4249_RS06615at 1346.614 kb on + strand, within A4249_RS06615at 1346.615 kb on - strand, within A4249_RS06615at 1346.615 kb on - strand, within A4249_RS06615at 1346.615 kb on - strand, within A4249_RS06615at 1346.615 kb on - strand, within A4249_RS06615at 1346.615 kb on - strand, within A4249_RS06615at 1346.615 kb on - strand, within A4249_RS06615at 1346.725 kb on + strand, within A4249_RS06615at 1346.942 kb on + strand, within A4249_RS06615at 1346.942 kb on + strand, within A4249_RS06615at 1346.942 kb on + strand, within A4249_RS06615at 1346.942 kb on + strand, within A4249_RS06615at 1346.942 kb on + strand, within A4249_RS06615at 1346.942 kb on + strand, within A4249_RS06615at 1346.942 kb on + strand, within A4249_RS06615at 1346.942 kb on + strand, within A4249_RS06615at 1346.943 kb on - strand, within A4249_RS06615at 1346.943 kb on - strand, within A4249_RS06615at 1346.943 kb on - strand, within A4249_RS06615at 1346.943 kb on - strand, within A4249_RS06615at 1346.943 kb on - strand, within A4249_RS06615at 1346.943 kb on - strand, within A4249_RS06615at 1346.943 kb on - strand, within A4249_RS06615at 1346.943 kb on - strand, within A4249_RS06615at 1346.943 kb on - strand, within A4249_RS06615at 1347.026 kb on + strand, within A4249_RS06615at 1347.027 kb on - strand, within A4249_RS06615at 1347.027 kb on - strand, within A4249_RS06615at 1347.056 kb on + strand, within A4249_RS06615at 1347.057 kb on - strand, within A4249_RS06615at 1347.057 kb on - strand, within A4249_RS06615at 1347.057 kb on - strand, within A4249_RS06615at 1347.161 kb on + strand, within A4249_RS06615at 1347.161 kb on + strand, within A4249_RS06615at 1347.161 kb on + strand, within A4249_RS06615at 1347.161 kb on + strand, within A4249_RS06615at 1347.161 kb on + strand, within A4249_RS06615at 1347.162 kb on - strand, within A4249_RS06615at 1347.162 kb on - strand, within A4249_RS06615at 1347.162 kb on - strand, within A4249_RS06615at 1347.162 kb on - strand, within A4249_RS06615at 1347.162 kb on - strand, within A4249_RS06615at 1347.466 kb on + strandat 1347.466 kb on + strandat 1347.467 kb on - strandat 1347.467 kb on - strandat 1347.478 kb on + strandat 1347.666 kb on + strand, within A4249_RS06620at 1347.666 kb on + strand, within A4249_RS06620at 1347.667 kb on - strand, within A4249_RS06620at 1347.762 kb on + strand, within A4249_RS06620at 1347.770 kb on + strand, within A4249_RS06620at 1347.771 kb on - strand, within A4249_RS06620at 1347.771 kb on - strand, within A4249_RS06620at 1347.822 kb on + strand, within A4249_RS06620at 1347.823 kb on - strand, within A4249_RS06620at 1347.889 kb on - strand, within A4249_RS06620at 1348.076 kb on + strand, within A4249_RS06620at 1348.076 kb on + strand, within A4249_RS06620at 1348.076 kb on + strand, within A4249_RS06620at 1348.076 kb on + strand, within A4249_RS06620at 1348.077 kb on - strand, within A4249_RS06620at 1348.077 kb on - strand, within A4249_RS06620at 1348.077 kb on - strand, within A4249_RS06620at 1348.077 kb on - strand, within A4249_RS06620at 1348.077 kb on - strand, within A4249_RS06620at 1348.197 kb on + strand, within A4249_RS06620at 1348.197 kb on + strand, within A4249_RS06620at 1348.197 kb on + strand, within A4249_RS06620at 1348.197 kb on + strand, within A4249_RS06620at 1348.197 kb on + strand, within A4249_RS06620at 1348.197 kb on + strand, within A4249_RS06620at 1348.198 kb on - strand, within A4249_RS06620at 1348.198 kb on - strand, within A4249_RS06620at 1348.248 kb on + strand, within A4249_RS06620at 1348.248 kb on + strand, within A4249_RS06620at 1348.248 kb on + strand, within A4249_RS06620at 1348.283 kb on + strandat 1348.283 kb on + strandat 1348.283 kb on + strandat 1348.284 kb on - strandat 1348.284 kb on - strandat 1348.284 kb on - strandat 1348.475 kb on + strandat 1348.476 kb on - strandat 1348.706 kb on + strand, within A4249_RS06625at 1348.706 kb on + strand, within A4249_RS06625at 1348.706 kb on + strand, within A4249_RS06625at 1348.706 kb on + strand, within A4249_RS06625at 1348.706 kb on + strand, within A4249_RS06625at 1348.706 kb on + strand, within A4249_RS06625at 1348.706 kb on + strand, within A4249_RS06625at 1348.706 kb on + strand, within A4249_RS06625at 1348.706 kb on + strand, within A4249_RS06625at 1348.706 kb on + strand, within A4249_RS06625at 1348.706 kb on + strand, within A4249_RS06625at 1348.706 kb on + strand, within A4249_RS06625at 1348.706 kb on + strand, within A4249_RS06625at 1348.706 kb on + strand, within A4249_RS06625at 1348.706 kb on + strand, within A4249_RS06625at 1348.706 kb on + strand, within A4249_RS06625at 1348.706 kb on + strand, within A4249_RS06625at 1348.706 kb on + strand, within A4249_RS06625at 1348.707 kb on - strand, within A4249_RS06625at 1348.707 kb on - strand, within A4249_RS06625at 1348.707 kb on - strand, within A4249_RS06625at 1348.707 kb on - strand, within A4249_RS06625at 1348.707 kb on - strand, within A4249_RS06625at 1348.707 kb on - strand, within A4249_RS06625at 1348.707 kb on - strand, within A4249_RS06625at 1348.707 kb on - strand, within A4249_RS06625at 1348.707 kb on - strand, within A4249_RS06625at 1348.707 kb on - strand, within A4249_RS06625at 1348.736 kb on + strand, within A4249_RS06625at 1348.736 kb on + strand, within A4249_RS06625at 1348.736 kb on + strand, within A4249_RS06625at 1348.737 kb on - strand, within A4249_RS06625at 1348.737 kb on - strand, within A4249_RS06625at 1348.737 kb on - strand, within A4249_RS06625at 1348.737 kb on - strand, within A4249_RS06625at 1348.737 kb on - strand, within A4249_RS06625at 1348.769 kb on + strand, within A4249_RS06625at 1348.769 kb on + strand, within A4249_RS06625at 1348.769 kb on + strand, within A4249_RS06625at 1348.769 kb on + strand, within A4249_RS06625at 1348.769 kb on + strand, within A4249_RS06625at 1348.769 kb on + strand, within A4249_RS06625at 1348.769 kb on + strand, within A4249_RS06625at 1348.769 kb on + strand, within A4249_RS06625at 1348.769 kb on + strand, within A4249_RS06625at 1348.770 kb on - strand, within A4249_RS06625at 1348.770 kb on - strand, within A4249_RS06625at 1348.770 kb on - strand, within A4249_RS06625at 1348.770 kb on - strand, within A4249_RS06625at 1348.770 kb on - strand, within A4249_RS06625at 1348.770 kb on - strand, within A4249_RS06625at 1348.802 kb on + strand, within A4249_RS06625at 1348.802 kb on + strand, within A4249_RS06625at 1348.803 kb on - strand, within A4249_RS06625at 1348.803 kb on - strand, within A4249_RS06625at 1348.952 kb on + strand, within A4249_RS06625at 1348.952 kb on + strand, within A4249_RS06625at 1348.952 kb on + strand, within A4249_RS06625at 1348.952 kb on + strand, within A4249_RS06625at 1348.952 kb on + strand, within A4249_RS06625at 1348.952 kb on + strand, within A4249_RS06625at 1348.952 kb on + strand, within A4249_RS06625at 1348.952 kb on + strand, within A4249_RS06625at 1348.952 kb on + strand, within A4249_RS06625at 1348.952 kb on + strand, within A4249_RS06625at 1348.952 kb on + strand, within A4249_RS06625at 1348.953 kb on - strand, within A4249_RS06625at 1348.953 kb on - strand, within A4249_RS06625at 1348.953 kb on - strand, within A4249_RS06625at 1348.953 kb on - strand, within A4249_RS06625at 1348.953 kb on - strand, within A4249_RS06625at 1348.953 kb on - strand, within A4249_RS06625at 1349.141 kb on + strand, within A4249_RS06625at 1349.141 kb on + strand, within A4249_RS06625at 1349.141 kb on + strand, within A4249_RS06625at 1349.142 kb on - strand, within A4249_RS06625at 1349.142 kb on - strand, within A4249_RS06625at 1349.289 kb on - strand, within A4249_RS06625

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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1,346,614 + A4249_RS06615 0.40 -0.5
1,346,614 + A4249_RS06615 0.40 +0.2
1,346,614 + A4249_RS06615 0.40 -0.5
1,346,614 + A4249_RS06615 0.40 -1.1
1,346,614 + A4249_RS06615 0.40 +0.6
1,346,614 + A4249_RS06615 0.40 -0.2
1,346,614 + A4249_RS06615 0.40 -0.3
1,346,614 + A4249_RS06615 0.40 -0.3
1,346,614 + A4249_RS06615 0.40 +0.6
1,346,614 + A4249_RS06615 0.40 +1.0
1,346,615 - A4249_RS06615 0.40 -0.1
1,346,615 - A4249_RS06615 0.40 +0.4
1,346,615 - A4249_RS06615 0.40 -0.6
1,346,615 - A4249_RS06615 0.40 +0.6
1,346,615 - A4249_RS06615 0.40 +0.2
1,346,615 - A4249_RS06615 0.40 -1.5
1,346,725 + A4249_RS06615 0.48 -0.1
1,346,942 + A4249_RS06615 0.64 +0.7
1,346,942 + A4249_RS06615 0.64 +0.1
1,346,942 + A4249_RS06615 0.64 +0.5
1,346,942 + A4249_RS06615 0.64 +0.0
1,346,942 + A4249_RS06615 0.64 -0.5
1,346,942 + A4249_RS06615 0.64 +0.3
1,346,942 + A4249_RS06615 0.64 -0.3
1,346,942 + A4249_RS06615 0.64 -2.2
1,346,943 - A4249_RS06615 0.64 +0.5
1,346,943 - A4249_RS06615 0.64 +0.3
1,346,943 - A4249_RS06615 0.64 -0.0
1,346,943 - A4249_RS06615 0.64 +0.4
1,346,943 - A4249_RS06615 0.64 +0.4
1,346,943 - A4249_RS06615 0.64 -0.8
1,346,943 - A4249_RS06615 0.64 -0.0
1,346,943 - A4249_RS06615 0.64 -0.3
1,346,943 - A4249_RS06615 0.64 -0.2
1,347,026 + A4249_RS06615 0.70 -0.1
1,347,027 - A4249_RS06615 0.70 -0.5
1,347,027 - A4249_RS06615 0.70 -1.2
1,347,056 + A4249_RS06615 0.72 -1.3
1,347,057 - A4249_RS06615 0.72 -1.6
1,347,057 - A4249_RS06615 0.72 +0.6
1,347,057 - A4249_RS06615 0.72 +0.2
1,347,161 + A4249_RS06615 0.80 +0.8
1,347,161 + A4249_RS06615 0.80 -0.5
1,347,161 + A4249_RS06615 0.80 -0.6
1,347,161 + A4249_RS06615 0.80 -0.6
1,347,161 + A4249_RS06615 0.80 -0.0
1,347,162 - A4249_RS06615 0.80 -0.1
1,347,162 - A4249_RS06615 0.80 -0.3
1,347,162 - A4249_RS06615 0.80 +0.5
1,347,162 - A4249_RS06615 0.80 +0.4
1,347,162 - A4249_RS06615 0.80 +0.1
1,347,466 + -0.0
1,347,466 + +1.0
1,347,467 - -0.2
1,347,467 - +0.4
1,347,478 + +1.0
1,347,666 + A4249_RS06620 0.18 +0.6
1,347,666 + A4249_RS06620 0.18 -0.3
1,347,667 - A4249_RS06620 0.18 +1.6
1,347,762 + A4249_RS06620 0.30 +0.2
1,347,770 + A4249_RS06620 0.31 +0.6
1,347,771 - A4249_RS06620 0.31 +1.1
1,347,771 - A4249_RS06620 0.31 -0.6
1,347,822 + A4249_RS06620 0.37 -0.1
1,347,823 - A4249_RS06620 0.37 +0.1
1,347,889 - A4249_RS06620 0.46 -0.6
1,348,076 + A4249_RS06620 0.68 +0.9
1,348,076 + A4249_RS06620 0.68 -0.2
1,348,076 + A4249_RS06620 0.68 +0.6
1,348,076 + A4249_RS06620 0.68 +0.2
1,348,077 - A4249_RS06620 0.68 -0.1
1,348,077 - A4249_RS06620 0.68 -0.3
1,348,077 - A4249_RS06620 0.68 -0.4
1,348,077 - A4249_RS06620 0.68 +0.5
1,348,077 - A4249_RS06620 0.68 -1.1
1,348,197 + A4249_RS06620 0.83 +0.4
1,348,197 + A4249_RS06620 0.83 +0.2
1,348,197 + A4249_RS06620 0.83 +0.6
1,348,197 + A4249_RS06620 0.83 +1.4
1,348,197 + A4249_RS06620 0.83 -0.6
1,348,197 + A4249_RS06620 0.83 +0.9
1,348,198 - A4249_RS06620 0.83 +0.2
1,348,198 - A4249_RS06620 0.83 +0.4
1,348,248 + A4249_RS06620 0.89 -0.2
1,348,248 + A4249_RS06620 0.89 +0.1
1,348,248 + A4249_RS06620 0.89 -0.1
1,348,283 + +0.1
1,348,283 + -0.5
1,348,283 + +0.2
1,348,284 - -0.7
1,348,284 - -1.3
1,348,284 - +0.1
1,348,475 + +0.3
1,348,476 - -0.9
1,348,706 + A4249_RS06625 0.23 -0.1
1,348,706 + A4249_RS06625 0.23 -0.3
1,348,706 + A4249_RS06625 0.23 +0.5
1,348,706 + A4249_RS06625 0.23 +0.3
1,348,706 + A4249_RS06625 0.23 +0.9
1,348,706 + A4249_RS06625 0.23 +0.5
1,348,706 + A4249_RS06625 0.23 -0.3
1,348,706 + A4249_RS06625 0.23 +0.8
1,348,706 + A4249_RS06625 0.23 +0.6
1,348,706 + A4249_RS06625 0.23 +0.5
1,348,706 + A4249_RS06625 0.23 -1.1
1,348,706 + A4249_RS06625 0.23 +0.2
1,348,706 + A4249_RS06625 0.23 -0.4
1,348,706 + A4249_RS06625 0.23 -0.5
1,348,706 + A4249_RS06625 0.23 +0.6
1,348,706 + A4249_RS06625 0.23 -2.2
1,348,706 + A4249_RS06625 0.23 -1.2
1,348,706 + A4249_RS06625 0.23 +0.2
1,348,707 - A4249_RS06625 0.23 +0.2
1,348,707 - A4249_RS06625 0.23 -0.3
1,348,707 - A4249_RS06625 0.23 -2.0
1,348,707 - A4249_RS06625 0.23 -1.4
1,348,707 - A4249_RS06625 0.23 +0.7
1,348,707 - A4249_RS06625 0.23 +1.1
1,348,707 - A4249_RS06625 0.23 -0.1
1,348,707 - A4249_RS06625 0.23 +0.0
1,348,707 - A4249_RS06625 0.23 -0.7
1,348,707 - A4249_RS06625 0.23 -0.4
1,348,736 + A4249_RS06625 0.24 -0.6
1,348,736 + A4249_RS06625 0.24 -0.1
1,348,736 + A4249_RS06625 0.24 +0.1
1,348,737 - A4249_RS06625 0.24 -0.3
1,348,737 - A4249_RS06625 0.24 +0.1
1,348,737 - A4249_RS06625 0.24 -0.4
1,348,737 - A4249_RS06625 0.24 -0.7
1,348,737 - A4249_RS06625 0.24 +0.5
1,348,769 + A4249_RS06625 0.26 -0.7
1,348,769 + A4249_RS06625 0.26 -0.8
1,348,769 + A4249_RS06625 0.26 -0.1
1,348,769 + A4249_RS06625 0.26 +0.3
1,348,769 + A4249_RS06625 0.26 +0.1
1,348,769 + A4249_RS06625 0.26 +0.3
1,348,769 + A4249_RS06625 0.26 -0.5
1,348,769 + A4249_RS06625 0.26 -1.5
1,348,769 + A4249_RS06625 0.26 -0.7
1,348,770 - A4249_RS06625 0.26 +0.1
1,348,770 - A4249_RS06625 0.26 +0.6
1,348,770 - A4249_RS06625 0.26 -0.9
1,348,770 - A4249_RS06625 0.26 +1.0
1,348,770 - A4249_RS06625 0.26 -0.7
1,348,770 - A4249_RS06625 0.26 -0.2
1,348,802 + A4249_RS06625 0.28 -1.5
1,348,802 + A4249_RS06625 0.28 +0.8
1,348,803 - A4249_RS06625 0.28 -0.1
1,348,803 - A4249_RS06625 0.28 -0.3
1,348,952 + A4249_RS06625 0.37 +0.3
1,348,952 + A4249_RS06625 0.37 +0.3
1,348,952 + A4249_RS06625 0.37 +0.1
1,348,952 + A4249_RS06625 0.37 -0.3
1,348,952 + A4249_RS06625 0.37 +0.1
1,348,952 + A4249_RS06625 0.37 +0.2
1,348,952 + A4249_RS06625 0.37 -0.7
1,348,952 + A4249_RS06625 0.37 +1.0
1,348,952 + A4249_RS06625 0.37 -0.1
1,348,952 + A4249_RS06625 0.37 -0.2
1,348,952 + A4249_RS06625 0.37 +0.3
1,348,953 - A4249_RS06625 0.37 +0.0
1,348,953 - A4249_RS06625 0.37 +0.1
1,348,953 - A4249_RS06625 0.37 +0.1
1,348,953 - A4249_RS06625 0.37 +0.7
1,348,953 - A4249_RS06625 0.37 -0.4
1,348,953 - A4249_RS06625 0.37 -0.9
1,349,141 + A4249_RS06625 0.49 +1.0
1,349,141 + A4249_RS06625 0.49 +0.1
1,349,141 + A4249_RS06625 0.49 +0.1
1,349,142 - A4249_RS06625 0.49 -1.4
1,349,142 - A4249_RS06625 0.49 -0.5
1,349,289 - A4249_RS06625 0.58 +0.3

Or see this region's nucleotide sequence