Experiment: Guanine 0.6617 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS04385 and A4249_RS04390 overlap by 4 nucleotides A4249_RS04390 and A4249_RS04395 are separated by 19 nucleotides A4249_RS04395 and A4249_RS04400 are separated by 109 nucleotides
A4249_RS04385: A4249_RS04385 - ABC transporter permease, at 908,154 to 909,221
_RS04385
A4249_RS04390: A4249_RS04390 - ABC transporter ATP-binding protein, at 909,218 to 910,105
_RS04390
A4249_RS04395: A4249_RS04395 - polyprenyl synthetase family protein, at 910,125 to 911,021
_RS04395
A4249_RS04400: A4249_RS04400 - type 2 isopentenyl-diphosphate Delta-isomerase, at 911,131 to 912,174
_RS04400
Position (kb) 910
911
912 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 909.133 kb on + strand at 909.133 kb on + strand at 909.133 kb on + strand at 909.133 kb on + strand at 909.133 kb on + strand at 909.134 kb on - strand at 909.134 kb on - strand at 909.134 kb on - strand at 909.134 kb on - strand at 909.134 kb on - strand at 909.134 kb on - strand at 909.153 kb on + strand at 909.153 kb on + strand at 909.153 kb on + strand at 909.153 kb on + strand at 909.153 kb on + strand at 909.154 kb on - strand at 909.154 kb on - strand at 909.154 kb on - strand at 909.614 kb on + strand, within A4249_RS04390 at 909.615 kb on - strand, within A4249_RS04390 at 909.831 kb on - strand, within A4249_RS04390 at 909.938 kb on + strand, within A4249_RS04390 at 909.938 kb on + strand, within A4249_RS04390 at 909.938 kb on + strand, within A4249_RS04390 at 909.938 kb on + strand, within A4249_RS04390 at 909.938 kb on + strand, within A4249_RS04390 at 909.938 kb on + strand, within A4249_RS04390 at 909.939 kb on - strand, within A4249_RS04390 at 909.939 kb on - strand, within A4249_RS04390 at 909.939 kb on - strand, within A4249_RS04390 at 910.026 kb on + strand at 910.026 kb on + strand at 910.026 kb on + strand at 910.026 kb on + strand at 910.026 kb on + strand at 910.027 kb on - strand at 910.027 kb on - strand at 910.027 kb on - strand at 910.027 kb on - strand at 910.027 kb on - strand at 910.027 kb on - strand at 910.027 kb on - strand at 910.027 kb on - strand at 910.165 kb on + strand at 910.165 kb on + strand at 910.165 kb on + strand at 910.165 kb on + strand at 910.165 kb on + strand at 910.165 kb on + strand at 910.166 kb on - strand at 910.166 kb on - strand at 910.166 kb on - strand at 910.166 kb on - strand at 910.166 kb on - strand at 910.166 kb on - strand at 910.166 kb on - strand at 910.166 kb on - strand at 910.166 kb on - strand at 910.449 kb on + strand, within A4249_RS04395 at 910.450 kb on - strand, within A4249_RS04395 at 910.450 kb on - strand, within A4249_RS04395 at 910.450 kb on - strand, within A4249_RS04395 at 910.789 kb on + strand, within A4249_RS04395 at 910.789 kb on + strand, within A4249_RS04395 at 910.790 kb on - strand, within A4249_RS04395 at 910.790 kb on - strand, within A4249_RS04395 at 910.790 kb on - strand, within A4249_RS04395 at 910.790 kb on - strand, within A4249_RS04395 at 910.895 kb on + strand, within A4249_RS04395 at 910.895 kb on + strand, within A4249_RS04395 at 910.895 kb on + strand, within A4249_RS04395 at 911.021 kb on + strand at 911.021 kb on + strand at 911.022 kb on - strand at 911.022 kb on - strand at 911.034 kb on + strand at 911.073 kb on + strand at 911.073 kb on + strand at 911.073 kb on + strand at 911.073 kb on + strand at 911.074 kb on - strand at 911.084 kb on - strand at 911.084 kb on - strand at 911.262 kb on + strand, within A4249_RS04400 at 911.262 kb on + strand, within A4249_RS04400 at 911.262 kb on + strand, within A4249_RS04400 at 911.263 kb on - strand, within A4249_RS04400 at 911.263 kb on - strand, within A4249_RS04400 at 911.543 kb on - strand, within A4249_RS04400 at 911.543 kb on - strand, within A4249_RS04400 at 911.906 kb on + strand, within A4249_RS04400 at 911.906 kb on + strand, within A4249_RS04400 at 911.907 kb on - strand, within A4249_RS04400
Per-strain Table
Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C) remove 909,133 + -0.3 909,133 + -1.2 909,133 + -0.2 909,133 + -0.4 909,133 + -0.9 909,134 - +0.5 909,134 - -0.0 909,134 - +0.1 909,134 - -0.5 909,134 - +1.1 909,134 - -0.4 909,153 + +1.2 909,153 + +0.5 909,153 + -1.6 909,153 + +2.0 909,153 + -0.4 909,154 - -0.5 909,154 - +0.8 909,154 - -0.2 909,614 + A4249_RS04390 0.45 -0.5 909,615 - A4249_RS04390 0.45 -0.8 909,831 - A4249_RS04390 0.69 -0.0 909,938 + A4249_RS04390 0.81 +0.2 909,938 + A4249_RS04390 0.81 -0.6 909,938 + A4249_RS04390 0.81 -1.9 909,938 + A4249_RS04390 0.81 -3.1 909,938 + A4249_RS04390 0.81 -0.3 909,938 + A4249_RS04390 0.81 +0.1 909,939 - A4249_RS04390 0.81 -0.7 909,939 - A4249_RS04390 0.81 -0.2 909,939 - A4249_RS04390 0.81 -0.3 910,026 + +0.1 910,026 + +0.3 910,026 + -0.1 910,026 + +0.9 910,026 + -0.1 910,027 - -0.9 910,027 - +0.5 910,027 - +0.0 910,027 - -0.1 910,027 - -0.5 910,027 - +0.2 910,027 - +0.5 910,027 - +0.2 910,165 + -0.1 910,165 + -0.8 910,165 + -0.5 910,165 + -0.6 910,165 + -0.3 910,165 + +1.0 910,166 - -0.6 910,166 - -0.1 910,166 - -0.4 910,166 - +0.6 910,166 - +1.4 910,166 - +1.3 910,166 - -0.1 910,166 - -0.8 910,166 - +0.6 910,449 + A4249_RS04395 0.36 -1.4 910,450 - A4249_RS04395 0.36 +0.0 910,450 - A4249_RS04395 0.36 -0.2 910,450 - A4249_RS04395 0.36 -0.6 910,789 + A4249_RS04395 0.74 +0.3 910,789 + A4249_RS04395 0.74 -1.2 910,790 - A4249_RS04395 0.74 -2.0 910,790 - A4249_RS04395 0.74 +0.2 910,790 - A4249_RS04395 0.74 -0.1 910,790 - A4249_RS04395 0.74 +1.0 910,895 + A4249_RS04395 0.86 -1.2 910,895 + A4249_RS04395 0.86 -0.5 910,895 + A4249_RS04395 0.86 -1.4 911,021 + -0.1 911,021 + -0.2 911,022 - -0.8 911,022 - +0.2 911,034 + +1.1 911,073 + -0.0 911,073 + -0.8 911,073 + -0.2 911,073 + -1.7 911,074 - -0.1 911,084 - +1.0 911,084 - -0.6 911,262 + A4249_RS04400 0.13 +0.2 911,262 + A4249_RS04400 0.13 +0.2 911,262 + A4249_RS04400 0.13 +0.2 911,263 - A4249_RS04400 0.13 -0.2 911,263 - A4249_RS04400 0.13 +0.0 911,543 - A4249_RS04400 0.39 -0.2 911,543 - A4249_RS04400 0.39 +1.0 911,906 + A4249_RS04400 0.74 +0.2 911,906 + A4249_RS04400 0.74 -0.0 911,907 - A4249_RS04400 0.74 +1.0
Or see this region's nucleotide sequence