Experiment: Guanine 0.6617 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS03880 and A4249_RS16735 are separated by 38 nucleotides A4249_RS16735 and A4249_RS03885 are separated by 149 nucleotides A4249_RS03885 and A4249_RS03890 are separated by 10 nucleotides
A4249_RS03880: A4249_RS03880 - L,D-transpeptidase family protein, at 816,854 to 817,921
_RS03880
A4249_RS16735: A4249_RS16735 - hypothetical protein, at 817,960 to 818,121
_RS16735
A4249_RS03885: A4249_RS03885 - GNAT family N-acetyltransferase, at 818,271 to 819,431
_RS03885
A4249_RS03890: A4249_RS03890 - transcriptional regulator, at 819,442 to 820,356
_RS03890
Position (kb) 818
819
820 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 817.393 kb on + strand, within A4249_RS03880 at 817.401 kb on + strand, within A4249_RS03880 at 817.402 kb on - strand, within A4249_RS03880 at 817.458 kb on + strand, within A4249_RS03880 at 817.459 kb on - strand, within A4249_RS03880 at 817.459 kb on - strand, within A4249_RS03880 at 817.459 kb on - strand, within A4249_RS03880 at 817.491 kb on + strand, within A4249_RS03880 at 817.491 kb on + strand, within A4249_RS03880 at 817.491 kb on + strand, within A4249_RS03880 at 817.491 kb on + strand, within A4249_RS03880 at 817.491 kb on + strand, within A4249_RS03880 at 817.491 kb on + strand, within A4249_RS03880 at 817.491 kb on + strand, within A4249_RS03880 at 817.492 kb on - strand, within A4249_RS03880 at 817.492 kb on - strand, within A4249_RS03880 at 817.492 kb on - strand, within A4249_RS03880 at 817.492 kb on - strand, within A4249_RS03880 at 817.492 kb on - strand, within A4249_RS03880 at 817.492 kb on - strand, within A4249_RS03880 at 817.761 kb on + strand, within A4249_RS03880 at 817.761 kb on + strand, within A4249_RS03880 at 817.761 kb on + strand, within A4249_RS03880 at 817.762 kb on - strand, within A4249_RS03880 at 817.762 kb on - strand, within A4249_RS03880 at 817.762 kb on - strand, within A4249_RS03880 at 817.762 kb on - strand, within A4249_RS03880 at 817.906 kb on - strand at 817.913 kb on - strand at 817.921 kb on + strand at 817.921 kb on + strand at 817.922 kb on - strand at 817.922 kb on - strand at 818.215 kb on - strand at 818.215 kb on - strand at 818.250 kb on + strand at 818.250 kb on + strand at 818.251 kb on - strand at 818.251 kb on - strand at 818.270 kb on + strand at 818.271 kb on - strand at 818.271 kb on - strand at 818.271 kb on - strand at 818.379 kb on + strand at 818.379 kb on + strand at 818.379 kb on + strand at 818.394 kb on + strand, within A4249_RS03885 at 818.395 kb on - strand, within A4249_RS03885 at 818.530 kb on - strand, within A4249_RS03885 at 818.530 kb on - strand, within A4249_RS03885 at 818.685 kb on + strand, within A4249_RS03885 at 818.686 kb on - strand, within A4249_RS03885 at 818.727 kb on + strand, within A4249_RS03885 at 818.728 kb on - strand, within A4249_RS03885 at 818.728 kb on - strand, within A4249_RS03885 at 819.016 kb on - strand, within A4249_RS03885 at 819.016 kb on - strand, within A4249_RS03885 at 819.036 kb on + strand, within A4249_RS03885 at 819.150 kb on + strand, within A4249_RS03885 at 819.150 kb on + strand, within A4249_RS03885 at 819.150 kb on + strand, within A4249_RS03885 at 819.151 kb on - strand, within A4249_RS03885 at 819.151 kb on - strand, within A4249_RS03885 at 819.589 kb on + strand, within A4249_RS03890 at 819.589 kb on + strand, within A4249_RS03890 at 819.589 kb on + strand, within A4249_RS03890 at 819.589 kb on + strand, within A4249_RS03890 at 819.589 kb on + strand, within A4249_RS03890 at 819.590 kb on - strand, within A4249_RS03890 at 819.590 kb on - strand, within A4249_RS03890 at 819.590 kb on - strand, within A4249_RS03890 at 819.590 kb on - strand, within A4249_RS03890 at 819.590 kb on - strand, within A4249_RS03890 at 819.590 kb on - strand, within A4249_RS03890 at 819.590 kb on - strand, within A4249_RS03890 at 819.595 kb on + strand, within A4249_RS03890 at 819.595 kb on + strand, within A4249_RS03890 at 819.595 kb on + strand, within A4249_RS03890 at 819.595 kb on + strand, within A4249_RS03890 at 819.596 kb on - strand, within A4249_RS03890 at 819.596 kb on - strand, within A4249_RS03890 at 819.772 kb on + strand, within A4249_RS03890 at 819.772 kb on + strand, within A4249_RS03890 at 819.772 kb on + strand, within A4249_RS03890 at 819.772 kb on + strand, within A4249_RS03890 at 819.772 kb on + strand, within A4249_RS03890 at 819.772 kb on + strand, within A4249_RS03890 at 819.773 kb on - strand, within A4249_RS03890 at 819.773 kb on - strand, within A4249_RS03890 at 819.773 kb on - strand, within A4249_RS03890 at 819.773 kb on - strand, within A4249_RS03890 at 819.841 kb on + strand, within A4249_RS03890 at 819.842 kb on - strand, within A4249_RS03890 at 819.842 kb on - strand, within A4249_RS03890 at 819.905 kb on - strand, within A4249_RS03890 at 819.905 kb on - strand, within A4249_RS03890 at 819.939 kb on + strand, within A4249_RS03890 at 819.940 kb on - strand, within A4249_RS03890 at 819.940 kb on - strand, within A4249_RS03890 at 819.982 kb on + strand, within A4249_RS03890 at 819.982 kb on + strand, within A4249_RS03890 at 819.982 kb on + strand, within A4249_RS03890 at 819.982 kb on + strand, within A4249_RS03890 at 819.982 kb on + strand, within A4249_RS03890 at 819.982 kb on + strand, within A4249_RS03890 at 819.983 kb on - strand, within A4249_RS03890 at 819.983 kb on - strand, within A4249_RS03890 at 819.983 kb on - strand, within A4249_RS03890 at 820.054 kb on + strand, within A4249_RS03890 at 820.054 kb on + strand, within A4249_RS03890 at 820.055 kb on - strand, within A4249_RS03890 at 820.275 kb on + strand at 820.275 kb on + strand at 820.276 kb on - strand at 820.354 kb on + strand at 820.354 kb on + strand at 820.354 kb on + strand at 820.354 kb on + strand at 820.354 kb on + strand at 820.355 kb on - strand at 820.355 kb on - strand at 820.355 kb on - strand at 820.355 kb on - strand at 820.368 kb on + strand at 820.368 kb on + strand at 820.369 kb on - strand at 820.369 kb on - strand at 820.392 kb on + strand at 820.393 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C) remove 817,393 + A4249_RS03880 0.50 +2.0 817,401 + A4249_RS03880 0.51 -0.5 817,402 - A4249_RS03880 0.51 -0.9 817,458 + A4249_RS03880 0.57 +0.8 817,459 - A4249_RS03880 0.57 +0.8 817,459 - A4249_RS03880 0.57 -1.5 817,459 - A4249_RS03880 0.57 -0.3 817,491 + A4249_RS03880 0.60 -0.3 817,491 + A4249_RS03880 0.60 +0.1 817,491 + A4249_RS03880 0.60 -0.5 817,491 + A4249_RS03880 0.60 +1.0 817,491 + A4249_RS03880 0.60 +0.1 817,491 + A4249_RS03880 0.60 -0.3 817,491 + A4249_RS03880 0.60 +0.0 817,492 - A4249_RS03880 0.60 +0.1 817,492 - A4249_RS03880 0.60 +0.2 817,492 - A4249_RS03880 0.60 -0.4 817,492 - A4249_RS03880 0.60 -1.4 817,492 - A4249_RS03880 0.60 +0.7 817,492 - A4249_RS03880 0.60 +0.4 817,761 + A4249_RS03880 0.85 +0.5 817,761 + A4249_RS03880 0.85 -0.2 817,761 + A4249_RS03880 0.85 -0.3 817,762 - A4249_RS03880 0.85 -0.5 817,762 - A4249_RS03880 0.85 -1.9 817,762 - A4249_RS03880 0.85 +0.6 817,762 - A4249_RS03880 0.85 -0.2 817,906 - -0.3 817,913 - -0.7 817,921 + -0.2 817,921 + +0.4 817,922 - -1.5 817,922 - -0.8 818,215 - +0.2 818,215 - -0.5 818,250 + -0.8 818,250 + -0.2 818,251 - +0.0 818,251 - +0.1 818,270 + -1.8 818,271 - -0.5 818,271 - -0.9 818,271 - -0.3 818,379 + +0.5 818,379 + +0.1 818,379 + +0.3 818,394 + A4249_RS03885 0.11 +0.4 818,395 - A4249_RS03885 0.11 +0.0 818,530 - A4249_RS03885 0.22 -1.0 818,530 - A4249_RS03885 0.22 +0.3 818,685 + A4249_RS03885 0.36 +1.3 818,686 - A4249_RS03885 0.36 +0.9 818,727 + A4249_RS03885 0.39 +0.4 818,728 - A4249_RS03885 0.39 +0.7 818,728 - A4249_RS03885 0.39 +0.9 819,016 - A4249_RS03885 0.64 +1.3 819,016 - A4249_RS03885 0.64 +1.0 819,036 + A4249_RS03885 0.66 +1.2 819,150 + A4249_RS03885 0.76 -0.9 819,150 + A4249_RS03885 0.76 -0.1 819,150 + A4249_RS03885 0.76 +0.2 819,151 - A4249_RS03885 0.76 +0.3 819,151 - A4249_RS03885 0.76 +0.5 819,589 + A4249_RS03890 0.16 -0.6 819,589 + A4249_RS03890 0.16 -0.5 819,589 + A4249_RS03890 0.16 -0.4 819,589 + A4249_RS03890 0.16 +0.2 819,589 + A4249_RS03890 0.16 -0.3 819,590 - A4249_RS03890 0.16 -1.5 819,590 - A4249_RS03890 0.16 +0.3 819,590 - A4249_RS03890 0.16 -0.2 819,590 - A4249_RS03890 0.16 -0.2 819,590 - A4249_RS03890 0.16 +0.2 819,590 - A4249_RS03890 0.16 +0.2 819,590 - A4249_RS03890 0.16 +0.3 819,595 + A4249_RS03890 0.17 +0.5 819,595 + A4249_RS03890 0.17 +1.0 819,595 + A4249_RS03890 0.17 -0.5 819,595 + A4249_RS03890 0.17 -1.0 819,596 - A4249_RS03890 0.17 -0.3 819,596 - A4249_RS03890 0.17 -0.6 819,772 + A4249_RS03890 0.36 +0.1 819,772 + A4249_RS03890 0.36 +0.5 819,772 + A4249_RS03890 0.36 -0.5 819,772 + A4249_RS03890 0.36 -0.2 819,772 + A4249_RS03890 0.36 +0.2 819,772 + A4249_RS03890 0.36 -0.0 819,773 - A4249_RS03890 0.36 +0.2 819,773 - A4249_RS03890 0.36 +0.2 819,773 - A4249_RS03890 0.36 -2.8 819,773 - A4249_RS03890 0.36 +0.1 819,841 + A4249_RS03890 0.44 -0.3 819,842 - A4249_RS03890 0.44 -0.0 819,842 - A4249_RS03890 0.44 +0.0 819,905 - A4249_RS03890 0.51 +1.3 819,905 - A4249_RS03890 0.51 +1.1 819,939 + A4249_RS03890 0.54 +0.3 819,940 - A4249_RS03890 0.54 +0.3 819,940 - A4249_RS03890 0.54 -0.7 819,982 + A4249_RS03890 0.59 +1.1 819,982 + A4249_RS03890 0.59 -0.2 819,982 + A4249_RS03890 0.59 -1.8 819,982 + A4249_RS03890 0.59 -0.2 819,982 + A4249_RS03890 0.59 -0.5 819,982 + A4249_RS03890 0.59 +0.3 819,983 - A4249_RS03890 0.59 +0.4 819,983 - A4249_RS03890 0.59 +0.2 819,983 - A4249_RS03890 0.59 +1.3 820,054 + A4249_RS03890 0.67 -0.5 820,054 + A4249_RS03890 0.67 +1.3 820,055 - A4249_RS03890 0.67 +1.6 820,275 + +0.1 820,275 + +0.1 820,276 - +0.3 820,354 + +0.1 820,354 + -1.2 820,354 + -1.3 820,354 + +0.6 820,354 + -1.1 820,355 - -0.8 820,355 - -1.3 820,355 - +0.6 820,355 - -0.6 820,368 + -0.1 820,368 + -0.4 820,369 - +1.2 820,369 - -0.3 820,392 + -0.1 820,393 - +0.2
Or see this region's nucleotide sequence