Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS03335

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS03325 and A4249_RS03330 are separated by 89 nucleotidesA4249_RS03330 and A4249_RS03335 are separated by 50 nucleotidesA4249_RS03335 and A4249_RS03340 are separated by 13 nucleotidesA4249_RS03340 and A4249_RS03345 are separated by 30 nucleotides A4249_RS03325: A4249_RS03325 - hypothetical protein, at 698,219 to 698,869 _RS03325 A4249_RS03330: A4249_RS03330 - nuclear transport factor 2 family protein, at 698,959 to 699,426 _RS03330 A4249_RS03335: A4249_RS03335 - DUF411 domain-containing protein, at 699,477 to 699,950 _RS03335 A4249_RS03340: A4249_RS03340 - PepSY domain-containing protein, at 699,964 to 700,692 _RS03340 A4249_RS03345: A4249_RS03345 - type II restriction endonuclease, at 700,723 to 701,994 _RS03345 Position (kb) 699 700Strain fitness (log2 ratio) -2 -1 0 1at 698.716 kb on + strand, within A4249_RS03325at 698.716 kb on + strand, within A4249_RS03325at 698.717 kb on - strand, within A4249_RS03325at 698.717 kb on - strand, within A4249_RS03325at 698.717 kb on - strand, within A4249_RS03325at 698.717 kb on - strand, within A4249_RS03325at 698.717 kb on - strand, within A4249_RS03325at 698.717 kb on - strand, within A4249_RS03325at 698.774 kb on + strand, within A4249_RS03325at 698.774 kb on + strand, within A4249_RS03325at 698.775 kb on - strand, within A4249_RS03325at 698.775 kb on - strand, within A4249_RS03325at 698.775 kb on - strand, within A4249_RS03325at 698.775 kb on - strand, within A4249_RS03325at 699.064 kb on + strand, within A4249_RS03330at 699.064 kb on + strand, within A4249_RS03330at 699.064 kb on + strand, within A4249_RS03330at 699.064 kb on + strand, within A4249_RS03330at 699.065 kb on - strand, within A4249_RS03330at 699.166 kb on + strand, within A4249_RS03330at 699.166 kb on + strand, within A4249_RS03330at 699.167 kb on - strand, within A4249_RS03330at 699.167 kb on - strand, within A4249_RS03330at 699.167 kb on - strand, within A4249_RS03330at 699.169 kb on + strand, within A4249_RS03330at 699.169 kb on + strand, within A4249_RS03330at 699.169 kb on + strand, within A4249_RS03330at 699.169 kb on + strand, within A4249_RS03330at 699.169 kb on + strand, within A4249_RS03330at 699.169 kb on + strand, within A4249_RS03330at 699.169 kb on + strand, within A4249_RS03330at 699.170 kb on - strand, within A4249_RS03330at 699.170 kb on - strand, within A4249_RS03330at 699.170 kb on - strand, within A4249_RS03330at 699.170 kb on - strand, within A4249_RS03330at 699.170 kb on - strand, within A4249_RS03330at 699.170 kb on - strand, within A4249_RS03330at 699.170 kb on - strand, within A4249_RS03330at 699.258 kb on + strand, within A4249_RS03330at 699.259 kb on - strand, within A4249_RS03330at 699.280 kb on + strand, within A4249_RS03330at 699.280 kb on + strand, within A4249_RS03330at 699.280 kb on + strand, within A4249_RS03330at 699.280 kb on + strand, within A4249_RS03330at 699.280 kb on + strand, within A4249_RS03330at 699.280 kb on + strand, within A4249_RS03330at 699.280 kb on + strand, within A4249_RS03330at 699.281 kb on - strand, within A4249_RS03330at 699.281 kb on - strand, within A4249_RS03330at 699.281 kb on - strand, within A4249_RS03330at 699.281 kb on - strand, within A4249_RS03330at 699.281 kb on - strand, within A4249_RS03330at 699.281 kb on - strand, within A4249_RS03330at 699.281 kb on - strand, within A4249_RS03330at 699.281 kb on - strand, within A4249_RS03330at 699.281 kb on - strand, within A4249_RS03330at 699.281 kb on - strand, within A4249_RS03330at 699.281 kb on - strand, within A4249_RS03330at 699.281 kb on - strand, within A4249_RS03330at 699.286 kb on + strand, within A4249_RS03330at 699.286 kb on + strand, within A4249_RS03330at 699.286 kb on + strand, within A4249_RS03330at 699.286 kb on + strand, within A4249_RS03330at 699.286 kb on + strand, within A4249_RS03330at 699.286 kb on + strand, within A4249_RS03330at 699.286 kb on + strand, within A4249_RS03330at 699.287 kb on - strand, within A4249_RS03330at 699.287 kb on - strand, within A4249_RS03330at 699.323 kb on + strand, within A4249_RS03330at 699.323 kb on + strand, within A4249_RS03330at 699.323 kb on + strand, within A4249_RS03330at 699.324 kb on - strand, within A4249_RS03330at 699.324 kb on - strand, within A4249_RS03330at 699.324 kb on - strand, within A4249_RS03330at 699.386 kb on + strandat 699.387 kb on - strandat 699.388 kb on + strandat 699.388 kb on + strandat 699.388 kb on + strandat 699.388 kb on + strandat 699.388 kb on + strandat 699.388 kb on + strandat 699.388 kb on + strandat 699.388 kb on + strandat 699.388 kb on + strandat 699.388 kb on + strandat 699.388 kb on + strandat 699.388 kb on + strandat 699.388 kb on + strandat 699.388 kb on + strandat 699.388 kb on + strandat 699.388 kb on + strandat 699.388 kb on + strandat 699.389 kb on - strandat 699.389 kb on - strandat 699.389 kb on - strandat 699.389 kb on - strandat 699.389 kb on - strandat 699.389 kb on - strandat 699.389 kb on - strandat 699.389 kb on - strandat 699.389 kb on - strandat 699.389 kb on - strandat 699.389 kb on - strandat 699.389 kb on - strandat 699.389 kb on - strandat 699.591 kb on + strand, within A4249_RS03335at 699.591 kb on + strand, within A4249_RS03335at 699.592 kb on - strand, within A4249_RS03335at 699.592 kb on - strand, within A4249_RS03335at 699.592 kb on - strand, within A4249_RS03335at 699.592 kb on - strand, within A4249_RS03335at 699.592 kb on - strand, within A4249_RS03335at 699.753 kb on + strand, within A4249_RS03335at 699.753 kb on + strand, within A4249_RS03335at 699.753 kb on + strand, within A4249_RS03335at 699.753 kb on + strand, within A4249_RS03335at 699.753 kb on + strand, within A4249_RS03335at 699.753 kb on + strand, within A4249_RS03335at 699.754 kb on - strand, within A4249_RS03335at 699.754 kb on - strand, within A4249_RS03335at 699.754 kb on - strand, within A4249_RS03335at 699.754 kb on - strand, within A4249_RS03335at 699.754 kb on - strand, within A4249_RS03335at 699.891 kb on + strand, within A4249_RS03335at 699.891 kb on + strand, within A4249_RS03335at 699.891 kb on + strand, within A4249_RS03335at 699.891 kb on + strand, within A4249_RS03335at 699.892 kb on - strand, within A4249_RS03335at 699.892 kb on - strand, within A4249_RS03335at 699.892 kb on - strand, within A4249_RS03335at 699.948 kb on + strandat 700.330 kb on + strand, within A4249_RS03340at 700.330 kb on + strand, within A4249_RS03340at 700.330 kb on + strand, within A4249_RS03340at 700.330 kb on + strand, within A4249_RS03340at 700.330 kb on + strand, within A4249_RS03340at 700.330 kb on + strand, within A4249_RS03340at 700.331 kb on - strand, within A4249_RS03340at 700.447 kb on + strand, within A4249_RS03340at 700.447 kb on + strand, within A4249_RS03340at 700.447 kb on + strand, within A4249_RS03340at 700.447 kb on + strand, within A4249_RS03340at 700.447 kb on + strand, within A4249_RS03340at 700.447 kb on + strand, within A4249_RS03340at 700.447 kb on + strand, within A4249_RS03340at 700.448 kb on - strand, within A4249_RS03340at 700.448 kb on - strand, within A4249_RS03340at 700.448 kb on - strand, within A4249_RS03340at 700.448 kb on - strand, within A4249_RS03340at 700.448 kb on - strand, within A4249_RS03340at 700.448 kb on - strand, within A4249_RS03340at 700.504 kb on + strand, within A4249_RS03340at 700.504 kb on + strand, within A4249_RS03340at 700.504 kb on + strand, within A4249_RS03340at 700.504 kb on + strand, within A4249_RS03340at 700.504 kb on + strand, within A4249_RS03340at 700.504 kb on + strand, within A4249_RS03340at 700.504 kb on + strand, within A4249_RS03340at 700.504 kb on + strand, within A4249_RS03340at 700.504 kb on + strand, within A4249_RS03340at 700.504 kb on + strand, within A4249_RS03340at 700.504 kb on + strand, within A4249_RS03340at 700.504 kb on + strand, within A4249_RS03340at 700.504 kb on + strand, within A4249_RS03340at 700.504 kb on + strand, within A4249_RS03340at 700.505 kb on - strand, within A4249_RS03340at 700.505 kb on - strand, within A4249_RS03340at 700.505 kb on - strand, within A4249_RS03340at 700.505 kb on - strand, within A4249_RS03340at 700.505 kb on - strand, within A4249_RS03340at 700.625 kb on + strandat 700.625 kb on + strandat 700.626 kb on - strandat 700.626 kb on - strandat 700.627 kb on - strandat 700.820 kb on + strandat 700.820 kb on + strandat 700.820 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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698,716 + A4249_RS03325 0.76 -0.2
698,716 + A4249_RS03325 0.76 -0.4
698,717 - A4249_RS03325 0.76 +1.1
698,717 - A4249_RS03325 0.76 +0.3
698,717 - A4249_RS03325 0.76 +0.8
698,717 - A4249_RS03325 0.76 +0.1
698,717 - A4249_RS03325 0.76 -0.4
698,717 - A4249_RS03325 0.76 -0.1
698,774 + A4249_RS03325 0.85 +0.1
698,774 + A4249_RS03325 0.85 -0.4
698,775 - A4249_RS03325 0.85 +0.1
698,775 - A4249_RS03325 0.85 -0.7
698,775 - A4249_RS03325 0.85 +0.3
698,775 - A4249_RS03325 0.85 -0.6
699,064 + A4249_RS03330 0.22 -1.0
699,064 + A4249_RS03330 0.22 +0.2
699,064 + A4249_RS03330 0.22 +0.4
699,064 + A4249_RS03330 0.22 +0.9
699,065 - A4249_RS03330 0.23 +0.2
699,166 + A4249_RS03330 0.44 -0.4
699,166 + A4249_RS03330 0.44 -0.5
699,167 - A4249_RS03330 0.44 -0.3
699,167 - A4249_RS03330 0.44 -2.5
699,167 - A4249_RS03330 0.44 +0.4
699,169 + A4249_RS03330 0.45 -1.1
699,169 + A4249_RS03330 0.45 -0.6
699,169 + A4249_RS03330 0.45 +1.4
699,169 + A4249_RS03330 0.45 -0.5
699,169 + A4249_RS03330 0.45 -0.4
699,169 + A4249_RS03330 0.45 -1.0
699,169 + A4249_RS03330 0.45 -0.6
699,170 - A4249_RS03330 0.45 +0.3
699,170 - A4249_RS03330 0.45 +0.9
699,170 - A4249_RS03330 0.45 -0.4
699,170 - A4249_RS03330 0.45 +0.6
699,170 - A4249_RS03330 0.45 -1.0
699,170 - A4249_RS03330 0.45 -0.0
699,170 - A4249_RS03330 0.45 -2.6
699,258 + A4249_RS03330 0.64 -1.9
699,259 - A4249_RS03330 0.64 -0.6
699,280 + A4249_RS03330 0.69 +0.1
699,280 + A4249_RS03330 0.69 +0.2
699,280 + A4249_RS03330 0.69 -0.4
699,280 + A4249_RS03330 0.69 -1.4
699,280 + A4249_RS03330 0.69 -0.0
699,280 + A4249_RS03330 0.69 -0.2
699,280 + A4249_RS03330 0.69 -0.2
699,281 - A4249_RS03330 0.69 -0.3
699,281 - A4249_RS03330 0.69 +0.1
699,281 - A4249_RS03330 0.69 +0.0
699,281 - A4249_RS03330 0.69 +0.1
699,281 - A4249_RS03330 0.69 +1.2
699,281 - A4249_RS03330 0.69 +0.3
699,281 - A4249_RS03330 0.69 -0.2
699,281 - A4249_RS03330 0.69 +0.5
699,281 - A4249_RS03330 0.69 -1.0
699,281 - A4249_RS03330 0.69 +1.2
699,281 - A4249_RS03330 0.69 +0.0
699,281 - A4249_RS03330 0.69 -0.3
699,286 + A4249_RS03330 0.70 -0.1
699,286 + A4249_RS03330 0.70 +0.7
699,286 + A4249_RS03330 0.70 -0.9
699,286 + A4249_RS03330 0.70 -0.6
699,286 + A4249_RS03330 0.70 +0.1
699,286 + A4249_RS03330 0.70 +0.3
699,286 + A4249_RS03330 0.70 +0.2
699,287 - A4249_RS03330 0.70 -0.3
699,287 - A4249_RS03330 0.70 -0.5
699,323 + A4249_RS03330 0.78 +0.2
699,323 + A4249_RS03330 0.78 +1.0
699,323 + A4249_RS03330 0.78 -0.5
699,324 - A4249_RS03330 0.78 -0.3
699,324 - A4249_RS03330 0.78 -1.4
699,324 - A4249_RS03330 0.78 -0.8
699,386 + +0.2
699,387 - +0.7
699,388 + -0.1
699,388 + -0.4
699,388 + -0.0
699,388 + -0.6
699,388 + -0.2
699,388 + +0.1
699,388 + -0.1
699,388 + -0.6
699,388 + -1.4
699,388 + -1.1
699,388 + -0.2
699,388 + -0.5
699,388 + +0.3
699,388 + -0.4
699,388 + +1.1
699,388 + -0.4
699,388 + +0.6
699,389 - -1.5
699,389 - -0.1
699,389 - -2.0
699,389 - -1.2
699,389 - -0.1
699,389 - -0.2
699,389 - -0.7
699,389 - -1.1
699,389 - -0.5
699,389 - -1.1
699,389 - -0.0
699,389 - -1.3
699,389 - +0.4
699,591 + A4249_RS03335 0.24 -0.8
699,591 + A4249_RS03335 0.24 +1.0
699,592 - A4249_RS03335 0.24 +0.1
699,592 - A4249_RS03335 0.24 +0.2
699,592 - A4249_RS03335 0.24 +0.3
699,592 - A4249_RS03335 0.24 +0.4
699,592 - A4249_RS03335 0.24 -0.1
699,753 + A4249_RS03335 0.58 -0.5
699,753 + A4249_RS03335 0.58 +1.1
699,753 + A4249_RS03335 0.58 -0.2
699,753 + A4249_RS03335 0.58 -1.2
699,753 + A4249_RS03335 0.58 +0.0
699,753 + A4249_RS03335 0.58 +0.4
699,754 - A4249_RS03335 0.58 -0.5
699,754 - A4249_RS03335 0.58 +0.1
699,754 - A4249_RS03335 0.58 -0.3
699,754 - A4249_RS03335 0.58 +0.1
699,754 - A4249_RS03335 0.58 -0.6
699,891 + A4249_RS03335 0.87 -0.8
699,891 + A4249_RS03335 0.87 +1.6
699,891 + A4249_RS03335 0.87 -0.7
699,891 + A4249_RS03335 0.87 -1.5
699,892 - A4249_RS03335 0.88 -0.2
699,892 - A4249_RS03335 0.88 -0.7
699,892 - A4249_RS03335 0.88 -0.1
699,948 + +0.5
700,330 + A4249_RS03340 0.50 -0.9
700,330 + A4249_RS03340 0.50 +0.3
700,330 + A4249_RS03340 0.50 -0.3
700,330 + A4249_RS03340 0.50 +0.4
700,330 + A4249_RS03340 0.50 -0.8
700,330 + A4249_RS03340 0.50 +0.2
700,331 - A4249_RS03340 0.50 -0.4
700,447 + A4249_RS03340 0.66 +0.2
700,447 + A4249_RS03340 0.66 -0.4
700,447 + A4249_RS03340 0.66 -0.4
700,447 + A4249_RS03340 0.66 +0.1
700,447 + A4249_RS03340 0.66 +0.0
700,447 + A4249_RS03340 0.66 +0.9
700,447 + A4249_RS03340 0.66 +0.0
700,448 - A4249_RS03340 0.66 -0.0
700,448 - A4249_RS03340 0.66 -0.1
700,448 - A4249_RS03340 0.66 -0.8
700,448 - A4249_RS03340 0.66 -0.1
700,448 - A4249_RS03340 0.66 +0.9
700,448 - A4249_RS03340 0.66 -0.4
700,504 + A4249_RS03340 0.74 -0.3
700,504 + A4249_RS03340 0.74 -0.6
700,504 + A4249_RS03340 0.74 +0.7
700,504 + A4249_RS03340 0.74 -0.1
700,504 + A4249_RS03340 0.74 -2.2
700,504 + A4249_RS03340 0.74 -0.2
700,504 + A4249_RS03340 0.74 -0.3
700,504 + A4249_RS03340 0.74 -0.4
700,504 + A4249_RS03340 0.74 -0.6
700,504 + A4249_RS03340 0.74 -0.1
700,504 + A4249_RS03340 0.74 +0.6
700,504 + A4249_RS03340 0.74 -0.2
700,504 + A4249_RS03340 0.74 +0.5
700,504 + A4249_RS03340 0.74 -0.6
700,505 - A4249_RS03340 0.74 +0.2
700,505 - A4249_RS03340 0.74 +0.0
700,505 - A4249_RS03340 0.74 +0.6
700,505 - A4249_RS03340 0.74 +0.5
700,505 - A4249_RS03340 0.74 -0.2
700,625 + -0.3
700,625 + -0.6
700,626 - -1.4
700,626 - +1.2
700,627 - -0.1
700,820 + -0.6
700,820 + +0.7
700,820 + -0.7

Or see this region's nucleotide sequence