Strain Fitness in Escherichia coli ECRC102 around NIAGMN_28525

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
3,731	-	ehxD	NIAGMN_28520	0.35	-1.5
3,877	-	ehxD	NIAGMN_28520	0.46	-1.7
3,877	-	ehxD	NIAGMN_28520	0.46	-1.4
3,877	-	ehxD	NIAGMN_28520	0.46	+0.5
3,877	-	ehxD	NIAGMN_28520	0.46	+0.3
3,989	-	ehxD	NIAGMN_28520	0.53	+0.6
4,289	+	ehxD	NIAGMN_28520	0.74	+1.4
4,454	-	ehxD	NIAGMN_28520	0.86	+1.3
4,479	-	ehxD	NIAGMN_28520	0.87	-1.8
4,695	-				+1.4
5,076	-	ehxB	NIAGMN_28525	0.19	-1.2
5,096	-	ehxB	NIAGMN_28525	0.20	-1.4
5,114	-	ehxB	NIAGMN_28525	0.21	+1.0
5,129	-	ehxB	NIAGMN_28525	0.22	+3.0
5,129	-	ehxB	NIAGMN_28525	0.22	+1.8
5,321	-	ehxB	NIAGMN_28525	0.31	-1.0
5,408	-	ehxB	NIAGMN_28525	0.35	-1.7
5,438	-	ehxB	NIAGMN_28525	0.36	-0.0
5,442	-	ehxB	NIAGMN_28525	0.37	-1.8
5,442	-	ehxB	NIAGMN_28525	0.37	-0.6
5,444	+	ehxB	NIAGMN_28525	0.37	-0.1
5,546	-	ehxB	NIAGMN_28525	0.42	+1.4
5,611	+	ehxB	NIAGMN_28525	0.45	+1.4
5,611	+	ehxB	NIAGMN_28525	0.45	+1.5
5,611	+	ehxB	NIAGMN_28525	0.45	-1.1
5,612	-	ehxB	NIAGMN_28525	0.45	+1.4
5,615	+	ehxB	NIAGMN_28525	0.45	+1.1
5,615	+	ehxB	NIAGMN_28525	0.45	+3.2
5,616	-	ehxB	NIAGMN_28525	0.45	+0.6
5,642	+	ehxB	NIAGMN_28525	0.46	+0.0
5,643	-	ehxB	NIAGMN_28525	0.46	+2.6
5,723	-	ehxB	NIAGMN_28525	0.50	+1.0
5,723	-	ehxB	NIAGMN_28525	0.50	+2.1
5,723	-	ehxB	NIAGMN_28525	0.50	-2.2
5,742	-	ehxB	NIAGMN_28525	0.51	-1.8
5,761	+	ehxB	NIAGMN_28525	0.52	+0.2
5,840	+	ehxB	NIAGMN_28525	0.55	+0.2
5,841	-	ehxB	NIAGMN_28525	0.55	-0.4
5,867	+	ehxB	NIAGMN_28525	0.57	+0.5
5,875	-	ehxB	NIAGMN_28525	0.57	+0.8
6,410	-	ehxB	NIAGMN_28525	0.82	-0.1
6,498	+	ehxB	NIAGMN_28525	0.86	-0.2
6,532	+	ehxB	NIAGMN_28525	0.88	-0.3
6,696	-				-0.6
6,718	+				+0.4
6,719	-				+1.1
6,722	-				+1.4
6,775	+				+1.3
6,784	+				-0.5
6,829	+				+0.8
6,830	-				-1.3
6,892	+				-1.4
7,002	+				+0.6
7,050	+				+3.4
7,092	-				-0.3
7,110	-				-0.6
7,341	-	ehxA	NIAGMN_28530	0.17	-2.2
7,449	-	ehxA	NIAGMN_28530	0.21	-1.4
7,502	-	ehxA	NIAGMN_28530	0.22	+0.0
7,580	+	ehxA	NIAGMN_28530	0.25	-2.9
7,582	+	ehxA	NIAGMN_28530	0.25	+1.7
7,625	+	ehxA	NIAGMN_28530	0.26	+0.7
7,737	-	ehxA	NIAGMN_28530	0.30	+0.3
7,744	-	ehxA	NIAGMN_28530	0.30	+1.5