Strain Fitness in Escherichia coli ECRC102 around NIAGMN_24220

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
4,737,850	+				+0.7
4,737,949	+	rluC	NIAGMN_24215	0.17	+1.0
4,738,074	+	rluC	NIAGMN_24215	0.30	+2.1
4,738,074	+	rluC	NIAGMN_24215	0.30	-0.1
4,738,076	+	rluC	NIAGMN_24215	0.30	-1.4
4,738,125	+	rluC	NIAGMN_24215	0.35	+1.3
4,738,489	+	rluC	NIAGMN_24215	0.73	+2.1
4,738,528	+	rluC	NIAGMN_24215	0.77	-0.9
4,738,535	+	rluC	NIAGMN_24215	0.78	+0.8
4,738,756	+				+0.5
4,738,756	+				+0.7
4,738,756	+				+1.9
4,738,756	+				-0.7
4,738,757	-				+0.6
4,738,758	+				+0.2
4,738,758	+				+0.1
4,738,758	+				-0.5
4,738,758	+				+2.1
4,738,758	+				-0.2
4,738,758	+				-1.0
4,738,758	+				+1.4
4,738,758	+				+1.0
4,738,759	-				+0.6
4,738,759	-				-0.6
4,738,784	+				-0.7
4,738,882	-				+2.7
4,738,926	-	yceF	NIAGMN_24220	0.12	+0.2
4,738,980	-	yceF	NIAGMN_24220	0.21	-1.8
4,739,021	-	yceF	NIAGMN_24220	0.28	-1.7
4,739,024	+	yceF	NIAGMN_24220	0.28	-0.1
4,739,221	-	yceF	NIAGMN_24220	0.60	+0.5
4,739,432	+				+0.4
4,739,449	+				-0.5
4,739,451	+				-1.6
4,739,451	+				+0.9
4,739,475	-				+1.9
4,739,480	-				+1.8
4,739,647	+				+1.7
4,739,702	+	yceD	NIAGMN_24230	0.14	-1.2
4,739,702	+	yceD	NIAGMN_24230	0.14	-0.2
4,739,702	+	yceD	NIAGMN_24230	0.14	-1.9
4,739,706	+	yceD	NIAGMN_24230	0.14	-1.0
4,739,706	+	yceD	NIAGMN_24230	0.14	-0.4
4,739,706	+	yceD	NIAGMN_24230	0.14	+3.8
4,739,706	+	yceD	NIAGMN_24230	0.14	+1.3
4,739,870	+	yceD	NIAGMN_24230	0.46	+1.0
4,739,883	+	yceD	NIAGMN_24230	0.48	+1.6
4,739,883	+	yceD	NIAGMN_24230	0.48	+0.1
4,739,883	+	yceD	NIAGMN_24230	0.48	-0.7
4,739,892	+	yceD	NIAGMN_24230	0.50	-0.3
4,739,892	+	yceD	NIAGMN_24230	0.50	-0.2
4,739,892	+	yceD	NIAGMN_24230	0.50	-0.2
4,739,946	+	yceD	NIAGMN_24230	0.60	-0.6
4,739,946	+	yceD	NIAGMN_24230	0.60	-0.8
4,740,028	+	yceD	NIAGMN_24230	0.76	-1.2
4,740,127	+				-1.4
4,740,139	+				-0.4
4,740,146	+				-0.5
4,740,150	+				-0.4
4,740,150	+				+1.2
4,740,150	+				+0.3
4,740,185	+				+1.0
4,740,345	+	rpmF	NIAGMN_24235	0.81	+1.8
4,740,348	+	rpmF	NIAGMN_24235	0.83	+0.1
4,740,371	+				+0.7
4,740,371	+				+0.1
4,740,375	+				-0.8