Strain Fitness in Escherichia coli ECRC102 around NIAGMN_15110

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
3,011,088	+	tufA_E379K	NIAGMN_15105	0.50	+0.6
3,011,495	+	tufA_E379K	NIAGMN_15105	0.84	-0.3
3,011,498	+	tufA_E379K	NIAGMN_15105	0.85	+0.9
3,011,498	+	tufA_E379K	NIAGMN_15105	0.85	-1.5
3,011,659	+				-1.0
3,011,659	+				+1.0
3,011,676	+				-0.2
3,011,680	+				+0.5
3,011,680	+				-2.1
3,011,691	+				-0.7
3,011,691	+				+1.1
3,011,754	-				+0.1
3,011,758	-				-0.9
3,011,782	-				-0.8
3,011,793	-				+0.0
3,011,793	-				-2.3
3,011,864	+				+1.1
3,011,864	+				-0.0
3,011,865	-				+0.5
3,011,865	-				-1.2
3,011,865	-				-0.8
3,011,865	-				-2.8
3,011,878	+				-0.4
3,011,878	+				+0.3
3,011,879	-				+2.6
3,011,879	-				+1.4
3,011,886	+	bfd	NIAGMN_15110	0.13	-0.7
3,011,886	+	bfd	NIAGMN_15110	0.13	+2.5
3,011,886	+	bfd	NIAGMN_15110	0.13	-3.0
3,011,887	-	bfd	NIAGMN_15110	0.13	+2.1
3,011,887	-	bfd	NIAGMN_15110	0.13	-0.7
3,011,981	-	bfd	NIAGMN_15110	0.62	-1.6
3,012,094	+				+0.4
3,012,094	+				+1.9
3,012,094	+				+0.2
3,012,095	-				+0.3
3,012,095	-				-0.4
3,012,101	+				+0.6
3,012,123	-				+0.4
3,012,124	+				+0.5
3,012,124	+				+0.9
3,012,125	-				+0.1
3,012,155	+				+1.5
3,012,168	+				+1.2
3,012,168	+				+0.8
3,012,200	+	bfr	NIAGMN_15115	0.15	-0.6
3,012,201	-	bfr	NIAGMN_15115	0.15	+0.3
3,012,247	+	bfr	NIAGMN_15115	0.25	+2.6
3,012,248	-	bfr	NIAGMN_15115	0.25	+1.4
3,012,295	+	bfr	NIAGMN_15115	0.35	+0.9
3,012,295	+	bfr	NIAGMN_15115	0.35	-0.1
3,012,295	+	bfr	NIAGMN_15115	0.35	+0.7
3,012,299	+	bfr	NIAGMN_15115	0.36	+0.9
3,012,299	+	bfr	NIAGMN_15115	0.36	-0.3
3,012,299	+	bfr	NIAGMN_15115	0.36	-0.3
3,012,299	+	bfr	NIAGMN_15115	0.36	+0.8
3,012,300	-	bfr	NIAGMN_15115	0.36	+1.6
3,012,300	-	bfr	NIAGMN_15115	0.36	+0.4
3,012,302	-	bfr	NIAGMN_15115	0.36	-2.0
3,012,311	-	bfr	NIAGMN_15115	0.38	-0.2
3,012,311	-	bfr	NIAGMN_15115	0.38	+2.2
3,012,311	-	bfr	NIAGMN_15115	0.38	+0.3
3,012,339	+	bfr	NIAGMN_15115	0.44	+0.8
3,012,340	-	bfr	NIAGMN_15115	0.44	+1.3
3,012,348	+	bfr	NIAGMN_15115	0.46	+1.5
3,012,348	+	bfr	NIAGMN_15115	0.46	+0.8
3,012,348	+	bfr	NIAGMN_15115	0.46	+0.9
3,012,349	-	bfr	NIAGMN_15115	0.46	+2.6
3,012,349	-	bfr	NIAGMN_15115	0.46	-1.5
3,012,352	+	bfr	NIAGMN_15115	0.47	+1.3
3,012,353	-	bfr	NIAGMN_15115	0.47	+2.5
3,012,357	+	bfr	NIAGMN_15115	0.48	+0.2
3,012,357	+	bfr	NIAGMN_15115	0.48	+0.9
3,012,405	+	bfr	NIAGMN_15115	0.58	+1.0
3,012,406	-	bfr	NIAGMN_15115	0.58	+1.6
3,012,406	-	bfr	NIAGMN_15115	0.58	+1.5
3,012,467	+	bfr	NIAGMN_15115	0.71	-1.4
3,012,467	+	bfr	NIAGMN_15115	0.71	+0.5
3,012,467	+	bfr	NIAGMN_15115	0.71	+1.6
3,012,467	+	bfr	NIAGMN_15115	0.71	+0.7
3,012,467	+	bfr	NIAGMN_15115	0.71	+1.1
3,012,467	+	bfr	NIAGMN_15115	0.71	-0.2
3,012,467	+	bfr	NIAGMN_15115	0.71	+1.1
3,012,467	+	bfr	NIAGMN_15115	0.71	+1.2
3,012,468	-	bfr	NIAGMN_15115	0.71	+0.9
3,012,468	-	bfr	NIAGMN_15115	0.71	+0.9
3,012,468	-	bfr	NIAGMN_15115	0.71	+1.9
3,012,468	-	bfr	NIAGMN_15115	0.71	+0.1
3,012,468	-	bfr	NIAGMN_15115	0.71	-0.6
3,012,518	-	bfr	NIAGMN_15115	0.82	-0.8
3,012,518	-	bfr	NIAGMN_15115	0.82	+0.7
3,012,621	+				-0.5
3,012,621	+				+1.3
3,012,621	+				+2.5
3,012,621	+				-0.9
3,012,622	-				+0.5
3,012,631	+				+3.0
3,012,631	+				+4.1
3,012,631	+				+0.5
3,012,719	-	pulO	NIAGMN_15120	0.25	+0.7
3,012,719	-	pulO	NIAGMN_15120	0.25	-0.8
3,012,763	+	pulO	NIAGMN_15120	0.35	+0.5
3,012,764	-	pulO	NIAGMN_15120	0.35	+0.2
3,012,818	+	pulO	NIAGMN_15120	0.46	-1.0
3,012,819	-	pulO	NIAGMN_15120	0.47	+0.4
3,012,824	-	pulO	NIAGMN_15120	0.48	+0.2
3,012,824	-	pulO	NIAGMN_15120	0.48	-1.6
3,012,834	+	pulO	NIAGMN_15120	0.50	+1.6
3,012,845	-	pulO	NIAGMN_15120	0.52	-0.1
3,012,851	+	pulO	NIAGMN_15120	0.53	+1.5
3,012,861	-	pulO	NIAGMN_15120	0.56	-1.8
3,012,861	-	pulO	NIAGMN_15120	0.56	+0.1
3,012,861	-	pulO	NIAGMN_15120	0.56	-0.0
3,012,888	+	pulO	NIAGMN_15120	0.61	-0.1
3,012,888	+	pulO	NIAGMN_15120	0.61	+1.2
3,012,888	+	pulO	NIAGMN_15120	0.61	+1.1
3,012,889	-	pulO	NIAGMN_15120	0.62	+0.3
3,012,889	-	pulO	NIAGMN_15120	0.62	+2.7
3,012,938	+	pulO	NIAGMN_15120	0.72	+0.1
3,012,938	+	pulO	NIAGMN_15120	0.72	-1.8
3,012,939	-	pulO	NIAGMN_15120	0.72	-0.6
3,012,939	-	pulO	NIAGMN_15120	0.72	-1.1
3,012,939	-	pulO	NIAGMN_15120	0.72	+0.1
3,012,962	-	pulO	NIAGMN_15120	0.77	+0.5
3,012,972	+	pulO	NIAGMN_15120	0.79	+1.2
3,012,972	+	pulO	NIAGMN_15120	0.79	-0.5
3,012,973	-	pulO	NIAGMN_15120	0.79	+0.5
3,012,973	-	pulO	NIAGMN_15120	0.79	+0.2
3,012,973	-	pulO	NIAGMN_15120	0.79	+0.5
3,012,973	-	pulO	NIAGMN_15120	0.79	+0.2
3,012,985	+	pulO	NIAGMN_15120	0.82	-2.1
3,012,985	+	pulO	NIAGMN_15120	0.82	-0.3
3,012,986	-	pulO	NIAGMN_15120	0.82	-1.8
3,013,018	+	pulO	NIAGMN_15120	0.89	+0.5
3,013,019	-	pulO	NIAGMN_15120	0.89	+0.3
3,013,037	+				-0.1
3,013,037	+				-0.9