Strain Fitness in Escherichia coli ECRC102 around NIAGMN_14205

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
2,827,139	-	uspA	NIAGMN_14195	0.61	+0.5
2,827,139	-	uspA	NIAGMN_14195	0.61	-1.3
2,827,139	-	uspA	NIAGMN_14195	0.61	+1.4
2,827,168	+	uspA	NIAGMN_14195	0.67	+1.2
2,827,169	-	uspA	NIAGMN_14195	0.68	+0.2
2,827,169	-	uspA	NIAGMN_14195	0.68	+2.3
2,827,169	-	uspA	NIAGMN_14195	0.68	+1.1
2,827,171	-	uspA	NIAGMN_14195	0.68	-2.6
2,827,171	-	uspA	NIAGMN_14195	0.68	-3.6
2,827,171	-	uspA	NIAGMN_14195	0.68	+0.8
2,827,171	-	uspA	NIAGMN_14195	0.68	+0.6
2,827,172	+	uspA	NIAGMN_14195	0.68	+0.6
2,827,172	+	uspA	NIAGMN_14195	0.68	-1.2
2,827,172	+	uspA	NIAGMN_14195	0.68	-0.0
2,827,172	+	uspA	NIAGMN_14195	0.68	-0.4
2,827,173	-	uspA	NIAGMN_14195	0.69	-0.9
2,827,173	-	uspA	NIAGMN_14195	0.69	-1.6
2,827,173	-	uspA	NIAGMN_14195	0.69	+1.0
2,827,173	-	uspA	NIAGMN_14195	0.69	-1.2
2,827,173	-	uspA	NIAGMN_14195	0.69	-0.7
2,827,173	-	uspA	NIAGMN_14195	0.69	-1.4
2,827,173	-	uspA	NIAGMN_14195	0.69	+2.4
2,827,173	-	uspA	NIAGMN_14195	0.69	-0.6
2,827,182	+	uspA	NIAGMN_14195	0.71	+1.3
2,827,182	+	uspA	NIAGMN_14195	0.71	-1.7
2,827,183	-	uspA	NIAGMN_14195	0.71	-0.7
2,827,183	-	uspA	NIAGMN_14195	0.71	-0.1
2,827,183	-	uspA	NIAGMN_14195	0.71	-1.1
2,827,187	+	uspA	NIAGMN_14195	0.72	+1.0
2,827,188	-	uspA	NIAGMN_14195	0.72	+0.2
2,827,188	-	uspA	NIAGMN_14195	0.72	-1.6
2,827,188	-	uspA	NIAGMN_14195	0.72	-1.7
2,827,188	-	uspA	NIAGMN_14195	0.72	+0.7
2,827,188	-	uspA	NIAGMN_14195	0.72	-0.6
2,827,188	-	uspA	NIAGMN_14195	0.72	-0.3
2,827,188	-	uspA	NIAGMN_14195	0.72	-1.0
2,827,193	+	uspA	NIAGMN_14195	0.73	+0.5
2,827,194	-	uspA	NIAGMN_14195	0.73	+0.2
2,827,194	-	uspA	NIAGMN_14195	0.73	-0.7
2,827,221	+	uspA	NIAGMN_14195	0.80	+0.3
2,827,221	+	uspA	NIAGMN_14195	0.80	+1.7
2,827,221	+	uspA	NIAGMN_14195	0.80	-1.5
2,827,221	+	uspA	NIAGMN_14195	0.80	-0.6
2,827,221	+	uspA	NIAGMN_14195	0.80	-0.0
2,827,222	-	uspA	NIAGMN_14195	0.80	+0.6
2,827,222	-	uspA	NIAGMN_14195	0.80	-1.4
2,827,235	-	uspA	NIAGMN_14195	0.83	-2.0
2,827,300	+				+0.3
2,827,300	+				+1.1
2,827,300	+				-0.5
2,827,301	-				-1.1
2,827,301	-				+3.5
2,827,301	-				-3.4
2,827,301	-				+2.0
2,827,302	+				-1.3
2,827,302	+				-0.3
2,827,302	+				-0.2
2,827,303	-				+2.8
2,827,303	-				-0.1
2,827,303	-				-0.8
2,827,309	+				+1.3
2,827,309	+				+0.1
2,827,309	+				+2.8
2,827,310	-				-0.9
2,827,315	+				+0.9
2,827,315	+				+0.8
2,827,315	+				+1.3
2,827,315	+				+0.9
2,827,315	+				-0.8
2,827,316	-				-2.4
2,827,351	-				+0.4
2,827,369	-				+0.7
2,827,392	-				+2.0
2,827,392	-				-0.6
2,827,392	-				+0.2
2,827,431	-				-2.2
2,827,442	+				+0.6
2,827,442	+				+1.6
2,827,442	+				-0.6
2,827,443	-				+0.1
2,827,447	+				+0.5
2,827,447	+				+0.8
2,827,447	+				+1.2
2,827,447	+				-0.2
2,827,449	+				+1.8
2,827,449	+				+0.4
2,827,449	+				-2.0
2,827,450	-				+0.1
2,827,450	-				+1.2
2,827,484	-				+0.7
2,827,515	+				-0.4
2,827,515	+				+0.5
2,827,515	+				+0.6
2,827,515	+				+0.5
2,827,515	+				-0.8
2,827,515	+				+2.0
2,827,515	+				+0.1
2,827,515	+				+0.5
2,827,516	-				+0.9
2,827,516	-				+1.2
2,827,516	-				+2.6
2,827,516	-				-0.2
2,827,516	-				+0.1
2,827,516	-				+1.1
2,827,516	-				+0.7
2,827,516	-				+0.1
2,827,517	+				-0.4
2,827,517	+				+0.4
2,827,517	+				+0.7
2,827,518	-				+0.8
2,827,518	-				-0.7
2,827,518	-				+0.1
2,827,518	-				-0.3
2,827,518	-				+0.7
2,827,518	-				+0.6
2,827,518	-				-0.6
2,827,518	-				-0.2
2,827,518	-				-0.4
2,827,523	+				+0.8
2,827,524	-				+1.2
2,827,562	+				+1.1
2,827,562	+				+2.1
2,827,563	-				+1.8
2,827,563	-				+1.9
2,827,567	+				+2.2
2,827,567	+				+1.5
2,827,567	+				+2.2
2,827,567	+				+2.6
2,827,567	+				+2.5
2,827,567	+				+0.5
2,827,567	+				+1.6
2,827,567	+				+2.3
2,827,567	+				+2.4
2,827,567	+				+3.4
2,827,567	+				+1.1
2,827,567	+				+2.0
2,827,567	+				+2.7
2,827,567	+				-1.1
2,827,568	-				+3.2
2,827,568	-				+2.8
2,827,568	-				+2.4
2,827,568	-				+2.2
2,827,568	-				+1.7
2,827,568	-				+2.1
2,827,568	-				+2.0
2,827,568	-				+1.8
2,827,571	+				+1.7
2,827,571	+				+1.9
2,827,571	+				+2.4
2,827,571	+				-0.3
2,827,571	+				-0.1
2,827,572	-				+1.9
2,827,572	-				+2.8
2,827,572	-				+2.7
2,827,572	-				+1.8
2,827,572	-				+2.3
2,827,628	-				+2.7
2,827,628	-				+1.2
2,827,644	-				+0.3
2,827,699	+				+2.1
2,827,699	+				+2.4
2,827,700	-				+2.8
2,827,700	-				+1.8
2,827,700	-				+2.6
2,827,700	-				+2.5
2,827,700	-				+2.5
2,827,700	-				+2.9
2,827,704	+				+0.4
2,827,705	-				+2.2
2,827,705	-				+2.2
2,827,719	+				+2.1
2,827,731	+				+2.8
2,827,731	+				+3.3
2,827,731	+				+2.6
2,827,731	+				+2.3
2,827,731	+				+1.9
2,827,732	-				+2.1
2,827,732	-				+1.7
2,827,750	+	uspB	NIAGMN_14200	0.15	+1.2
2,827,763	+	uspB	NIAGMN_14200	0.19	+0.1
2,827,776	+	uspB	NIAGMN_14200	0.23	+2.2
2,827,789	-	uspB	NIAGMN_14200	0.26	+3.3
2,827,794	+	uspB	NIAGMN_14200	0.28	+2.6
2,827,801	+	uspB	NIAGMN_14200	0.30	+2.2
2,827,820	+	uspB	NIAGMN_14200	0.36	+2.9
2,827,820	+	uspB	NIAGMN_14200	0.36	+1.4
2,827,821	-	uspB	NIAGMN_14200	0.36	+2.1
2,827,826	+	uspB	NIAGMN_14200	0.38	+2.0
2,827,826	+	uspB	NIAGMN_14200	0.38	+2.2
2,827,826	+	uspB	NIAGMN_14200	0.38	+2.6
2,827,827	-	uspB	NIAGMN_14200	0.38	+2.5
2,827,827	-	uspB	NIAGMN_14200	0.38	+2.1
2,827,827	-	uspB	NIAGMN_14200	0.38	+3.2
2,827,827	-	uspB	NIAGMN_14200	0.38	+2.7
2,827,827	-	uspB	NIAGMN_14200	0.38	+2.1
2,827,827	-	uspB	NIAGMN_14200	0.38	+3.1
2,827,849	+	uspB	NIAGMN_14200	0.44	+2.3
2,827,850	-	uspB	NIAGMN_14200	0.45	+1.0
2,827,892	+	uspB	NIAGMN_14200	0.57	+1.9
2,827,892	+	uspB	NIAGMN_14200	0.57	+3.4
2,827,892	+	uspB	NIAGMN_14200	0.57	+2.8
2,827,892	+	uspB	NIAGMN_14200	0.57	+2.9
2,827,893	-	uspB	NIAGMN_14200	0.57	+2.2
2,827,893	-	uspB	NIAGMN_14200	0.57	+3.0
2,827,893	-	uspB	NIAGMN_14200	0.57	+3.1
2,827,893	-	uspB	NIAGMN_14200	0.57	+2.2
2,827,893	-	uspB	NIAGMN_14200	0.57	+3.0
2,827,893	-	uspB	NIAGMN_14200	0.57	+2.5
2,827,894	+	uspB	NIAGMN_14200	0.58	+1.2
2,827,894	+	uspB	NIAGMN_14200	0.58	+2.0
2,827,894	+	uspB	NIAGMN_14200	0.58	+1.2
2,827,894	+	uspB	NIAGMN_14200	0.58	+3.0
2,827,894	+	uspB	NIAGMN_14200	0.58	+2.5
2,827,894	+	uspB	NIAGMN_14200	0.58	+3.0
2,827,894	+	uspB	NIAGMN_14200	0.58	+2.0
2,827,894	+	uspB	NIAGMN_14200	0.58	+2.2
2,827,894	+	uspB	NIAGMN_14200	0.58	+1.8
2,827,895	-	uspB	NIAGMN_14200	0.58	+2.3
2,827,895	-	uspB	NIAGMN_14200	0.58	+2.6
2,827,895	-	uspB	NIAGMN_14200	0.58	+1.9
2,827,895	-	uspB	NIAGMN_14200	0.58	+1.4
2,827,895	-	uspB	NIAGMN_14200	0.58	+1.4
2,827,895	-	uspB	NIAGMN_14200	0.58	+0.1
2,827,895	-	uspB	NIAGMN_14200	0.58	+2.6
2,827,895	-	uspB	NIAGMN_14200	0.58	+2.7
2,827,895	-	uspB	NIAGMN_14200	0.58	+3.0
2,827,898	+	uspB	NIAGMN_14200	0.59	-0.2
2,827,898	+	uspB	NIAGMN_14200	0.59	+3.4
2,827,898	+	uspB	NIAGMN_14200	0.59	+3.4
2,827,898	+	uspB	NIAGMN_14200	0.59	+2.1
2,827,898	+	uspB	NIAGMN_14200	0.59	+3.8
2,827,899	-	uspB	NIAGMN_14200	0.59	+2.2
2,827,899	-	uspB	NIAGMN_14200	0.59	+2.1
2,827,899	-	uspB	NIAGMN_14200	0.59	+3.4
2,827,899	-	uspB	NIAGMN_14200	0.59	+2.4
2,827,937	-	uspB	NIAGMN_14200	0.71	+2.5
2,828,048	+				+2.5
2,828,048	+				-2.8
2,828,049	-				-0.1
2,828,051	+				+0.1
2,828,101	+				-0.3
2,828,101	+				-0.1
2,828,101	+				+2.3
2,828,102	-				-0.8
2,828,104	+				+2.9
2,828,105	-				-0.6
2,828,105	-				+0.3
2,828,105	-				-0.6
2,828,268	-	pitA	NIAGMN_14205	0.11	-0.1
2,828,290	+	pitA	NIAGMN_14205	0.12	+1.1
2,828,646	-	pitA	NIAGMN_14205	0.36	+0.5
2,828,734	-	pitA	NIAGMN_14205	0.42	+2.3
2,828,736	+	pitA	NIAGMN_14205	0.42	+0.5
2,828,737	-	pitA	NIAGMN_14205	0.42	-1.4
2,829,291	-	pitA	NIAGMN_14205	0.79	-1.6
2,829,308	+	pitA	NIAGMN_14205	0.80	+0.3
2,829,309	-	pitA	NIAGMN_14205	0.80	+0.1
2,829,347	+	pitA	NIAGMN_14205	0.83	+0.3
2,829,348	-	pitA	NIAGMN_14205	0.83	-0.1
2,829,562	-				+0.3
2,829,600	+				+0.3
2,829,601	-				+1.5
2,829,601	-				-0.6
2,829,601	-				+1.1
2,829,605	+				+0.5
2,829,606	-				-0.5
2,829,645	+				-0.2
2,829,646	-				+1.2
2,829,646	-				-0.7
2,829,731	-				+2.5
2,829,736	-				+0.1
2,829,738	-				-0.4
2,829,740	-				-1.6
2,829,752	+				+2.0
2,829,752	+				+0.6
2,829,762	+				-1.0
2,829,768	+				-0.5
2,829,769	-				+0.7
2,829,801	-				+0.9
2,829,801	-				+0.7
2,829,857	+				-0.2
2,829,858	-				+1.2
2,829,860	+				+1.4
2,829,861	-				+0.4
2,829,861	-				-0.5
2,829,862	+				+1.6
2,829,862	+				-0.1
2,829,862	+				+0.8
2,829,863	-				+0.5
2,829,881	+				+0.5
2,829,881	+				+0.1
2,829,992	+	yhiN	NIAGMN_14210	0.13	-0.4
2,829,992	+	yhiN	NIAGMN_14210	0.13	+2.0
2,829,992	+	yhiN	NIAGMN_14210	0.13	-0.1
2,829,993	-	yhiN	NIAGMN_14210	0.13	-0.4
2,830,002	+	yhiN	NIAGMN_14210	0.14	+0.5
2,830,002	+	yhiN	NIAGMN_14210	0.14	+2.6
2,830,002	+	yhiN	NIAGMN_14210	0.14	+0.2
2,830,003	-	yhiN	NIAGMN_14210	0.14	+0.5
2,830,003	-	yhiN	NIAGMN_14210	0.14	+0.7
2,830,021	-	yhiN	NIAGMN_14210	0.15	-1.7
2,830,046	+	yhiN	NIAGMN_14210	0.17	+0.6
2,830,129	+	yhiN	NIAGMN_14210	0.24	+0.4
2,830,250	+	yhiN	NIAGMN_14210	0.34	-1.2
2,830,250	+	yhiN	NIAGMN_14210	0.34	-0.0
2,830,250	+	yhiN	NIAGMN_14210	0.34	-0.0
2,830,251	-	yhiN	NIAGMN_14210	0.34	+1.4
2,830,358	+	yhiN	NIAGMN_14210	0.43	-2.8
2,830,358	+	yhiN	NIAGMN_14210	0.43	-0.8
2,830,358	+	yhiN	NIAGMN_14210	0.43	+2.7
2,830,358	+	yhiN	NIAGMN_14210	0.43	+0.6
2,830,359	-	yhiN	NIAGMN_14210	0.43	+0.3
2,830,359	-	yhiN	NIAGMN_14210	0.43	-1.5
2,830,359	-	yhiN	NIAGMN_14210	0.43	-1.5
2,830,359	-	yhiN	NIAGMN_14210	0.43	+0.7
2,830,427	+	yhiN	NIAGMN_14210	0.49	+0.8
2,830,428	-	yhiN	NIAGMN_14210	0.49	+0.8
2,830,428	-	yhiN	NIAGMN_14210	0.49	-0.6
2,830,448	-	yhiN	NIAGMN_14210	0.51	+2.5
2,830,519	+	yhiN	NIAGMN_14210	0.57	-0.1
2,830,519	+	yhiN	NIAGMN_14210	0.57	-2.5
2,830,519	+	yhiN	NIAGMN_14210	0.57	-2.1
2,830,520	-	yhiN	NIAGMN_14210	0.57	-0.9
2,830,520	-	yhiN	NIAGMN_14210	0.57	-2.3
2,830,599	-	yhiN	NIAGMN_14210	0.63	+0.2