Strain Fitness in Escherichia coli ECRC102 around NIAGMN_11145

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
2,199,456	+	thiF	NIAGMN_11135	0.18	-0.2
2,199,456	+	thiF	NIAGMN_11135	0.18	+0.7
2,199,457	-	thiF	NIAGMN_11135	0.18	-2.8
2,199,458	+	thiF	NIAGMN_11135	0.18	+0.5
2,199,458	+	thiF	NIAGMN_11135	0.18	-0.5
2,199,516	+	thiF	NIAGMN_11135	0.26	+0.5
2,199,516	+	thiF	NIAGMN_11135	0.26	-1.0
2,199,517	-	thiF	NIAGMN_11135	0.26	+0.7
2,199,517	-	thiF	NIAGMN_11135	0.26	-0.1
2,199,630	+	thiF	NIAGMN_11135	0.41	-1.4
2,199,630	+	thiF	NIAGMN_11135	0.41	+0.6
2,199,630	+	thiF	NIAGMN_11135	0.41	-0.5
2,199,630	+	thiF	NIAGMN_11135	0.41	-0.5
2,199,630	+	thiF	NIAGMN_11135	0.41	-0.9
2,199,630	+	thiF	NIAGMN_11135	0.41	-2.1
2,199,630	+	thiF	NIAGMN_11135	0.41	-2.1
2,199,631	-	thiF	NIAGMN_11135	0.41	-1.6
2,199,631	-	thiF	NIAGMN_11135	0.41	-3.1
2,199,631	-	thiF	NIAGMN_11135	0.41	+0.8
2,199,707	-	thiF	NIAGMN_11135	0.51	-2.3
2,199,727	+	thiF	NIAGMN_11135	0.53	-1.0
2,199,728	-	thiF	NIAGMN_11135	0.54	-1.4
2,199,728	-	thiF	NIAGMN_11135	0.54	-2.1
2,199,760	+	thiF	NIAGMN_11135	0.58	-1.2
2,199,802	-	thiF	NIAGMN_11135	0.63	+0.4
2,199,940	+	thiF	NIAGMN_11135	0.82	-0.5
2,199,940	+	thiF	NIAGMN_11135	0.82	+1.3
2,199,940	+	thiF	NIAGMN_11135	0.82	-0.6
2,199,941	-	thiF	NIAGMN_11135	0.82	-0.9
2,199,945	+	thiF	NIAGMN_11135	0.82	-1.4
2,199,945	+	thiF	NIAGMN_11135	0.82	+0.1
2,199,946	-	thiF	NIAGMN_11135	0.82	-0.7
2,199,958	-	thiF	NIAGMN_11135	0.84	-4.4
2,199,995	-	thiF	NIAGMN_11135	0.89	-0.8
2,200,123	+	thiS	NIAGMN_11140	0.30	-0.2
2,200,123	+	thiS	NIAGMN_11140	0.30	-2.3
2,200,124	-	thiS	NIAGMN_11140	0.31	-0.1
2,200,169	+	thiS	NIAGMN_11140	0.53	-1.6
2,200,208	+	thiS	NIAGMN_11140	0.73	-0.2
2,200,208	+	thiS	NIAGMN_11140	0.73	-0.7
2,200,208	+	thiS	NIAGMN_11140	0.73	-1.2
2,200,208	+	thiS	NIAGMN_11140	0.73	-1.8
2,200,209	-	thiS	NIAGMN_11140	0.73	-2.1
2,200,247	+				-0.4
2,200,248	-				-0.6
2,200,268	+				-0.5
2,200,272	+				-1.6
2,200,272	+				-2.0
2,200,273	-				+0.6
2,200,273	-				+0.5
2,200,343	+	thiG	NIAGMN_11145	0.10	-0.6
2,200,343	+	thiG	NIAGMN_11145	0.10	-0.8
2,200,467	+	thiG	NIAGMN_11145	0.26	-0.4
2,200,467	+	thiG	NIAGMN_11145	0.26	-1.8
2,200,467	+	thiG	NIAGMN_11145	0.26	-2.7
2,200,467	+	thiG	NIAGMN_11145	0.26	+0.6
2,200,468	-	thiG	NIAGMN_11145	0.26	-0.8
2,200,623	-	thiG	NIAGMN_11145	0.47	+0.7
2,200,675	-	thiG	NIAGMN_11145	0.53	-0.4
2,200,770	+	thiG	NIAGMN_11145	0.66	+0.4
2,200,770	+	thiG	NIAGMN_11145	0.66	+1.2
2,200,770	+	thiG	NIAGMN_11145	0.66	-0.8
2,200,771	-	thiG	NIAGMN_11145	0.66	+0.5
2,200,771	-	thiG	NIAGMN_11145	0.66	+0.8
2,200,771	-	thiG	NIAGMN_11145	0.66	-0.1
2,200,771	-	thiG	NIAGMN_11145	0.66	+3.3
2,200,868	+	thiG	NIAGMN_11145	0.78	+1.2
2,200,876	-	thiG	NIAGMN_11145	0.79	-0.3
2,200,934	+	thiG	NIAGMN_11145	0.87	-0.2
2,200,981	+				-0.9
2,200,981	+				-1.8
2,200,981	+				+0.5
2,201,030	+				-1.6
2,201,087	+				-2.3
2,201,114	-				+1.0
2,201,114	-				+1.1
2,201,153	+	thiH	NIAGMN_11150	0.11	-0.8
2,201,188	-	thiH	NIAGMN_11150	0.14	-1.8
2,201,250	-	thiH	NIAGMN_11150	0.19	+0.5
2,201,256	+	thiH	NIAGMN_11150	0.20	+0.3
2,201,256	+	thiH	NIAGMN_11150	0.20	-3.9
2,201,256	+	thiH	NIAGMN_11150	0.20	+0.4
2,201,256	+	thiH	NIAGMN_11150	0.20	-2.7
2,201,268	+	thiH	NIAGMN_11150	0.21	-0.4
2,201,269	-	thiH	NIAGMN_11150	0.21	-0.1
2,201,301	+	thiH	NIAGMN_11150	0.24	+0.7
2,201,301	+	thiH	NIAGMN_11150	0.24	+2.3
2,201,301	+	thiH	NIAGMN_11150	0.24	-2.0
2,201,302	-	thiH	NIAGMN_11150	0.24	-2.6
2,201,315	+	thiH	NIAGMN_11150	0.25	-1.9
2,201,316	-	thiH	NIAGMN_11150	0.25	-3.8
2,201,378	+	thiH	NIAGMN_11150	0.31	-2.3
2,201,378	+	thiH	NIAGMN_11150	0.31	+0.0
2,201,379	-	thiH	NIAGMN_11150	0.31	+0.2
2,201,381	-	thiH	NIAGMN_11150	0.31	-2.1
2,201,381	-	thiH	NIAGMN_11150	0.31	-0.4
2,201,410	+	thiH	NIAGMN_11150	0.33	-0.9
2,201,448	+	thiH	NIAGMN_11150	0.37	-0.7
2,201,448	+	thiH	NIAGMN_11150	0.37	-0.4
2,201,449	-	thiH	NIAGMN_11150	0.37	-1.9
2,201,494	+	thiH	NIAGMN_11150	0.41	+0.3
2,201,495	-	thiH	NIAGMN_11150	0.41	-0.1
2,201,495	-	thiH	NIAGMN_11150	0.41	-0.0
2,201,506	+	thiH	NIAGMN_11150	0.42	-0.5
2,201,507	-	thiH	NIAGMN_11150	0.42	+0.6
2,201,507	-	thiH	NIAGMN_11150	0.42	+0.4
2,201,539	+	thiH	NIAGMN_11150	0.45	-2.1
2,201,572	-	thiH	NIAGMN_11150	0.48	-1.2
2,201,572	-	thiH	NIAGMN_11150	0.48	-0.9
2,201,583	+	thiH	NIAGMN_11150	0.49	+1.2
2,201,583	+	thiH	NIAGMN_11150	0.49	-0.6
2,201,583	+	thiH	NIAGMN_11150	0.49	-1.6
2,201,583	+	thiH	NIAGMN_11150	0.49	-0.9
2,201,583	+	thiH	NIAGMN_11150	0.49	-0.9
2,201,583	+	thiH	NIAGMN_11150	0.49	-1.3
2,201,583	+	thiH	NIAGMN_11150	0.49	-0.0
2,201,583	+	thiH	NIAGMN_11150	0.49	+0.3
2,201,584	-	thiH	NIAGMN_11150	0.49	-4.3
2,201,598	+	thiH	NIAGMN_11150	0.50	+1.5
2,201,598	+	thiH	NIAGMN_11150	0.50	-1.9
2,201,599	-	thiH	NIAGMN_11150	0.50	-0.7
2,201,599	-	thiH	NIAGMN_11150	0.50	-2.5
2,201,684	+	thiH	NIAGMN_11150	0.58	-2.9
2,201,684	+	thiH	NIAGMN_11150	0.58	+0.6
2,201,684	+	thiH	NIAGMN_11150	0.58	-0.8
2,201,684	+	thiH	NIAGMN_11150	0.58	-1.0
2,201,685	-	thiH	NIAGMN_11150	0.58	-1.8
2,201,685	-	thiH	NIAGMN_11150	0.58	-2.0
2,201,690	-	thiH	NIAGMN_11150	0.58	-1.2
2,201,739	+	thiH	NIAGMN_11150	0.62	-0.1
2,201,739	+	thiH	NIAGMN_11150	0.62	+1.4
2,201,739	+	thiH	NIAGMN_11150	0.62	+1.7
2,201,739	+	thiH	NIAGMN_11150	0.62	+0.2
2,201,739	+	thiH	NIAGMN_11150	0.62	+1.9
2,201,739	+	thiH	NIAGMN_11150	0.62	-0.1
2,201,739	+	thiH	NIAGMN_11150	0.62	-2.7
2,201,740	-	thiH	NIAGMN_11150	0.63	+1.3
2,201,740	-	thiH	NIAGMN_11150	0.63	-0.1
2,201,740	-	thiH	NIAGMN_11150	0.63	-1.2
2,201,740	-	thiH	NIAGMN_11150	0.63	+0.5
2,201,740	-	thiH	NIAGMN_11150	0.63	-0.5
2,201,740	-	thiH	NIAGMN_11150	0.63	+2.0
2,201,740	-	thiH	NIAGMN_11150	0.63	-2.4
2,201,741	+	thiH	NIAGMN_11150	0.63	+0.9
2,201,741	+	thiH	NIAGMN_11150	0.63	-2.1
2,201,741	+	thiH	NIAGMN_11150	0.63	-0.1
2,201,741	+	thiH	NIAGMN_11150	0.63	-1.6
2,201,779	-	thiH	NIAGMN_11150	0.66	+0.1
2,201,825	+	thiH	NIAGMN_11150	0.70	-1.1
2,201,825	+	thiH	NIAGMN_11150	0.70	-0.0
2,201,825	+	thiH	NIAGMN_11150	0.70	-0.2
2,201,852	+	thiH	NIAGMN_11150	0.72	-1.3
2,201,975	+	thiH	NIAGMN_11150	0.83	+1.2
2,201,975	+	thiH	NIAGMN_11150	0.83	-1.2
2,201,976	-	thiH	NIAGMN_11150	0.83	+0.6
2,201,976	-	thiH	NIAGMN_11150	0.83	-3.1
2,201,976	-	thiH	NIAGMN_11150	0.83	-0.0
2,201,976	-	thiH	NIAGMN_11150	0.83	-0.3
2,201,978	+	thiH	NIAGMN_11150	0.84	-0.7