Strain Fitness in Escherichia coli ECRC102 around NIAGMN_10080

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
1,979,779	+	rnr	NIAGMN_10070	0.87	+1.1
1,979,779	+	rnr	NIAGMN_10070	0.87	-1.9
1,979,779	+	rnr	NIAGMN_10070	0.87	-1.0
1,979,779	+	rnr	NIAGMN_10070	0.87	-0.4
1,979,780	-	rnr	NIAGMN_10070	0.87	-0.7
1,979,780	-	rnr	NIAGMN_10070	0.87	-0.4
1,979,780	-	rnr	NIAGMN_10070	0.87	-0.1
1,979,780	-	rnr	NIAGMN_10070	0.87	-0.7
1,979,793	-	rnr	NIAGMN_10070	0.87	+2.0
1,979,837	+	rnr	NIAGMN_10070	0.89	-0.3
1,979,843	+	rnr	NIAGMN_10070	0.89	-1.5
1,979,878	+				+0.6
1,979,879	-				-3.5
1,979,894	+				+3.3
1,979,980	-				-3.6
1,980,036	-				+0.6
1,980,048	-				-1.7
1,980,159	-				-0.9
1,980,163	+				-0.7
1,980,204	+	nsrR	NIAGMN_10075	0.14	-1.7
1,980,205	-	nsrR	NIAGMN_10075	0.15	+0.8
1,980,205	-	nsrR	NIAGMN_10075	0.15	+1.6
1,980,205	-	nsrR	NIAGMN_10075	0.15	-2.0
1,980,241	+	nsrR	NIAGMN_10075	0.23	+0.5
1,980,274	+	nsrR	NIAGMN_10075	0.31	+0.9
1,980,274	+	nsrR	NIAGMN_10075	0.31	-0.3
1,980,274	+	nsrR	NIAGMN_10075	0.31	+2.0
1,980,274	+	nsrR	NIAGMN_10075	0.31	+1.6
1,980,275	-	nsrR	NIAGMN_10075	0.31	+0.4
1,980,275	-	nsrR	NIAGMN_10075	0.31	-0.5
1,980,275	-	nsrR	NIAGMN_10075	0.31	-1.3
1,980,275	-	nsrR	NIAGMN_10075	0.31	-0.5
1,980,275	-	nsrR	NIAGMN_10075	0.31	+1.7
1,980,275	-	nsrR	NIAGMN_10075	0.31	-1.6
1,980,275	-	nsrR	NIAGMN_10075	0.31	-1.7
1,980,275	-	nsrR	NIAGMN_10075	0.31	+2.1
1,980,275	-	nsrR	NIAGMN_10075	0.31	+1.6
1,980,343	+	nsrR	NIAGMN_10075	0.47	+1.1
1,980,343	+	nsrR	NIAGMN_10075	0.47	+0.6
1,980,343	+	nsrR	NIAGMN_10075	0.47	+0.0
1,980,343	+	nsrR	NIAGMN_10075	0.47	+1.1
1,980,343	+	nsrR	NIAGMN_10075	0.47	+1.7
1,980,343	+	nsrR	NIAGMN_10075	0.47	+2.5
1,980,343	+	nsrR	NIAGMN_10075	0.47	+1.8
1,980,344	-	nsrR	NIAGMN_10075	0.47	-0.3
1,980,344	-	nsrR	NIAGMN_10075	0.47	+2.0
1,980,344	-	nsrR	NIAGMN_10075	0.47	+0.1
1,980,344	-	nsrR	NIAGMN_10075	0.47	+1.7
1,980,344	-	nsrR	NIAGMN_10075	0.47	+1.3
1,980,344	-	nsrR	NIAGMN_10075	0.47	+0.3
1,980,348	-	nsrR	NIAGMN_10075	0.48	-0.7
1,980,364	+	nsrR	NIAGMN_10075	0.52	+1.2
1,980,365	-	nsrR	NIAGMN_10075	0.52	-0.0
1,980,421	+	nsrR	NIAGMN_10075	0.65	-1.3
1,980,421	+	nsrR	NIAGMN_10075	0.65	+1.8
1,980,445	+	nsrR	NIAGMN_10075	0.71	-0.6
1,980,446	-	nsrR	NIAGMN_10075	0.71	+1.6
1,980,446	-	nsrR	NIAGMN_10075	0.71	+0.9
1,980,522	+	nsrR	NIAGMN_10075	0.89	+0.7
1,980,522	+	nsrR	NIAGMN_10075	0.89	-1.0
1,980,522	+	nsrR	NIAGMN_10075	0.89	+1.1
1,980,522	+	nsrR	NIAGMN_10075	0.89	-0.8
1,980,523	-	nsrR	NIAGMN_10075	0.89	-1.6
1,980,523	-	nsrR	NIAGMN_10075	0.89	+1.4
1,980,536	+				-2.2
1,980,561	-				+1.0
1,980,600	-				+0.9
1,980,605	+				+0.3
1,980,605	+				+1.9
1,980,605	+				+1.9
1,980,606	-				-3.6
1,980,606	-				-0.8
1,980,606	-				+0.0
1,980,606	-				+3.2
1,980,607	+				+1.1
1,980,607	+				+0.6
1,980,608	-				+0.9
1,980,608	-				-0.7
1,980,608	-				+1.3
1,980,616	+				+0.2
1,980,617	-				+0.3
1,980,641	-				-0.8
1,980,646	-				-3.0
1,980,646	-				+0.7
1,980,679	+				+0.3
1,980,679	+				+1.2
1,980,680	-				+0.3
1,980,700	-				+1.1
1,980,700	-				-1.3
1,980,725	-				-0.1
1,980,725	-				+0.8
1,980,725	-				-0.3
1,980,725	-				-0.5
1,980,753	-				+1.3
1,980,774	+				+0.0
1,980,775	-				-1.1
1,980,775	-				-3.0
1,980,836	-				-3.9
1,980,877	-				-4.5
1,980,877	-				-3.5
1,980,877	-				-3.5
1,980,955	-	purA	NIAGMN_10080	0.14	-3.1
1,980,966	-	purA	NIAGMN_10080	0.15	-2.9
1,981,001	-	purA	NIAGMN_10080	0.18	-4.5
1,981,078	+	purA	NIAGMN_10080	0.23	-1.3
1,981,168	+	purA	NIAGMN_10080	0.30	-0.9
1,981,169	-	purA	NIAGMN_10080	0.30	-1.5
1,981,263	+	purA	NIAGMN_10080	0.38	-2.5
1,981,264	-	purA	NIAGMN_10080	0.38	-4.5
1,981,264	-	purA	NIAGMN_10080	0.38	-4.5
1,981,288	-	purA	NIAGMN_10080	0.40	-4.6
1,981,288	-	purA	NIAGMN_10080	0.40	+0.0
1,981,288	-	purA	NIAGMN_10080	0.40	-2.6
1,981,296	+	purA	NIAGMN_10080	0.40	-1.7
1,981,297	-	purA	NIAGMN_10080	0.40	-4.2
1,981,356	-	purA	NIAGMN_10080	0.45	-3.6
1,981,356	-	purA	NIAGMN_10080	0.45	-2.3
1,981,360	-	purA	NIAGMN_10080	0.45	-1.3
1,981,365	+	purA	NIAGMN_10080	0.46	-1.9
1,981,365	+	purA	NIAGMN_10080	0.46	+0.0
1,981,365	+	purA	NIAGMN_10080	0.46	-2.7
1,981,366	-	purA	NIAGMN_10080	0.46	-3.8
1,981,366	-	purA	NIAGMN_10080	0.46	-4.3
1,981,366	-	purA	NIAGMN_10080	0.46	-3.2
1,981,366	-	purA	NIAGMN_10080	0.46	-3.0
1,981,366	-	purA	NIAGMN_10080	0.46	-3.6
1,981,366	-	purA	NIAGMN_10080	0.46	-3.5
1,981,370	-	purA	NIAGMN_10080	0.46	-2.4
1,981,394	-	purA	NIAGMN_10080	0.48	-2.6
1,981,471	+	purA	NIAGMN_10080	0.54	-0.5
1,981,471	+	purA	NIAGMN_10080	0.54	-2.6
1,981,472	-	purA	NIAGMN_10080	0.54	-2.5
1,981,472	-	purA	NIAGMN_10080	0.54	-0.7
1,981,472	-	purA	NIAGMN_10080	0.54	-5.2
1,981,472	-	purA	NIAGMN_10080	0.54	-4.0
1,981,472	-	purA	NIAGMN_10080	0.54	-0.1
1,981,501	+	purA	NIAGMN_10080	0.56	-1.6
1,981,502	-	purA	NIAGMN_10080	0.56	-2.1
1,981,502	-	purA	NIAGMN_10080	0.56	-3.3
1,981,542	+	purA	NIAGMN_10080	0.59	-3.2
1,981,542	+	purA	NIAGMN_10080	0.59	-2.2
1,981,542	+	purA	NIAGMN_10080	0.59	-1.9
1,981,542	+	purA	NIAGMN_10080	0.59	-1.5
1,981,543	-	purA	NIAGMN_10080	0.59	-0.7
1,981,545	+	purA	NIAGMN_10080	0.59	-4.9
1,981,545	+	purA	NIAGMN_10080	0.59	-2.3
1,981,545	+	purA	NIAGMN_10080	0.59	-2.6
1,981,545	+	purA	NIAGMN_10080	0.59	-4.4
1,981,545	+	purA	NIAGMN_10080	0.59	+1.0
1,981,546	-	purA	NIAGMN_10080	0.60	-0.9
1,981,546	-	purA	NIAGMN_10080	0.60	-2.5
1,981,549	+	purA	NIAGMN_10080	0.60	-4.7
1,981,550	-	purA	NIAGMN_10080	0.60	-4.6
1,981,550	-	purA	NIAGMN_10080	0.60	-3.3
1,981,550	-	purA	NIAGMN_10080	0.60	-0.9
1,981,570	-	purA	NIAGMN_10080	0.61	+1.0
1,981,570	-	purA	NIAGMN_10080	0.61	-2.9
1,981,651	+	purA	NIAGMN_10080	0.68	-0.9
1,981,659	+	purA	NIAGMN_10080	0.68	-2.8
1,981,659	+	purA	NIAGMN_10080	0.68	-0.3
1,981,660	-	purA	NIAGMN_10080	0.68	-0.5
1,981,660	-	purA	NIAGMN_10080	0.68	-0.9
1,981,660	-	purA	NIAGMN_10080	0.68	-3.8
1,981,874	-	purA	NIAGMN_10080	0.85	-1.5
1,981,874	-	purA	NIAGMN_10080	0.85	-3.5
1,981,874	-	purA	NIAGMN_10080	0.85	+0.2
1,981,874	-	purA	NIAGMN_10080	0.85	-1.9
1,981,874	-	purA	NIAGMN_10080	0.85	-3.7
1,981,878	-	purA	NIAGMN_10080	0.85	-1.0
1,981,878	-	purA	NIAGMN_10080	0.85	-3.8
1,981,878	-	purA	NIAGMN_10080	0.85	-2.2
1,981,878	-	purA	NIAGMN_10080	0.85	-2.3
1,981,894	+	purA	NIAGMN_10080	0.86	-3.5
1,981,895	-	purA	NIAGMN_10080	0.86	-2.4
1,981,907	-	purA	NIAGMN_10080	0.87	-4.0
1,981,907	-	purA	NIAGMN_10080	0.87	-0.3
1,981,907	-	purA	NIAGMN_10080	0.87	-3.2
1,981,946	-				-3.9
1,981,946	-				-4.6
1,981,946	-				-3.7
1,981,977	-				-4.6
1,981,977	-				-2.7
1,981,977	-				-1.0
1,981,977	-				-4.1
1,981,977	-				-0.3
1,981,983	+				-4.8
1,981,983	+				-2.1
1,981,984	-				-2.4
1,981,984	-				-4.7
1,981,984	-				-4.5
1,981,984	-				-2.3
1,982,017	+				-1.9
1,982,018	-				-4.6
1,982,024	-				-3.9
1,982,024	-				-1.9
1,982,094	-				+1.1
1,982,106	+				+0.4
1,982,106	+				-2.0
1,982,107	-				-1.3
1,982,107	-				+1.1
1,982,126	+				-1.8
1,982,127	-				+0.3
1,982,127	-				-0.3
1,982,200	+	yjeT	NIAGMN_10085	0.13	-1.8
1,982,201	-	yjeT	NIAGMN_10085	0.13	-0.2
1,982,201	-	yjeT	NIAGMN_10085	0.13	+0.4
1,982,201	-	yjeT	NIAGMN_10085	0.13	+1.3
1,982,204	-	yjeT	NIAGMN_10085	0.15	-2.1
1,982,383	+				+1.7
1,982,385	+				+0.7
1,982,385	+				+2.2
1,982,386	-				+3.5
1,982,386	-				-0.6
1,982,451	-				+1.1
1,982,451	-				+0.7
1,982,451	-				+0.8
1,982,453	-				+1.2
1,982,486	-				-0.3
1,982,829	-	hflC	NIAGMN_10090	0.37	+2.2