Strain Fitness in Escherichia coli ECRC102 around NIAGMN_07945

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
1,522,463	+				-2.3
1,522,463	+				+3.1
1,522,464	-				+0.7
1,522,468	+				-0.6
1,522,468	+				-0.8
1,522,469	-				+1.3
1,522,495	+				-0.8
1,522,495	+				-0.5
1,522,495	+				+0.8
1,522,496	-				-1.8
1,522,496	-				+0.6
1,522,496	-				-0.8
1,522,497	+				+1.0
1,522,498	-				-0.3
1,522,534	+				-1.8
1,522,539	+				+2.4
1,522,539	+				+1.0
1,522,539	+				-1.8
1,522,562	+				+3.1
1,522,563	-				+2.8
1,522,585	+				-2.7
1,522,585	+				+0.1
1,522,687	+				+0.1
1,522,688	-				-1.0
1,522,748	-				-1.6
1,522,748	-				-0.7
1,522,793	+				+2.6
1,522,793	+				+0.9
1,522,794	-				+0.2
1,522,794	-				+2.2
1,522,796	+				+0.1
1,522,797	-				+0.9
1,522,797	-				+0.9
1,522,826	-	nlpE	NIAGMN_07940	0.13	-0.3
1,522,838	-	nlpE	NIAGMN_07940	0.15	-0.7
1,522,838	-	nlpE	NIAGMN_07940	0.15	+0.0
1,522,838	-	nlpE	NIAGMN_07940	0.15	-0.7
1,522,850	+	nlpE	NIAGMN_07940	0.16	+1.4
1,522,850	+	nlpE	NIAGMN_07940	0.16	-1.3
1,522,860	-	nlpE	NIAGMN_07940	0.18	-1.1
1,522,979	-	nlpE	NIAGMN_07940	0.35	-1.3
1,522,979	-	nlpE	NIAGMN_07940	0.35	+1.3
1,522,980	+	nlpE	NIAGMN_07940	0.35	+1.7
1,522,981	-	nlpE	NIAGMN_07940	0.35	-0.2
1,522,981	-	nlpE	NIAGMN_07940	0.35	-0.3
1,522,981	-	nlpE	NIAGMN_07940	0.35	+0.3
1,522,981	-	nlpE	NIAGMN_07940	0.35	-0.3
1,522,987	-	nlpE	NIAGMN_07940	0.36	+0.7
1,522,987	-	nlpE	NIAGMN_07940	0.36	+0.0
1,523,019	-	nlpE	NIAGMN_07940	0.40	-0.0
1,523,045	-	nlpE	NIAGMN_07940	0.44	+1.0
1,523,045	-	nlpE	NIAGMN_07940	0.44	+0.4
1,523,047	-	nlpE	NIAGMN_07940	0.44	-0.8
1,523,047	-	nlpE	NIAGMN_07940	0.44	+0.2
1,523,148	-	nlpE	NIAGMN_07940	0.58	+0.8
1,523,148	-	nlpE	NIAGMN_07940	0.58	-0.4
1,523,148	-	nlpE	NIAGMN_07940	0.58	-1.3
1,523,176	+	nlpE	NIAGMN_07940	0.62	-0.1
1,523,177	-	nlpE	NIAGMN_07940	0.62	-0.1
1,523,177	-	nlpE	NIAGMN_07940	0.62	-0.6
1,523,221	-	nlpE	NIAGMN_07940	0.69	-2.0
1,523,378	-				-1.8
1,523,381	-				-2.0
1,523,395	+				-1.2
1,523,575	-	arfB	NIAGMN_07945	0.29	-0.4
1,523,652	-	arfB	NIAGMN_07945	0.47	-1.7
1,523,661	+	arfB	NIAGMN_07945	0.50	+2.0
1,523,661	+	arfB	NIAGMN_07945	0.50	-1.0
1,523,662	-	arfB	NIAGMN_07945	0.50	+2.5
1,523,662	-	arfB	NIAGMN_07945	0.50	+0.6
1,523,713	+	arfB	NIAGMN_07945	0.62	-0.1
1,523,717	-	arfB	NIAGMN_07945	0.63	-0.5
1,523,717	-	arfB	NIAGMN_07945	0.63	-1.8
1,523,775	-	arfB	NIAGMN_07945	0.77	+0.2
1,523,775	-	arfB	NIAGMN_07945	0.77	+1.8
1,523,775	-	arfB	NIAGMN_07945	0.77	+2.9
1,523,775	-	arfB	NIAGMN_07945	0.77	+1.6
1,523,775	-	arfB	NIAGMN_07945	0.77	-2.9
1,523,778	-	arfB	NIAGMN_07945	0.78	-0.1
1,523,778	-	arfB	NIAGMN_07945	0.78	+1.1
1,523,778	-	arfB	NIAGMN_07945	0.78	+1.2
1,523,778	-	arfB	NIAGMN_07945	0.78	-0.7
1,523,906	-				-1.1
1,523,953	-				+1.4
1,524,086	-	yaeQ	NIAGMN_07950	0.29	-1.3
1,524,086	-	yaeQ	NIAGMN_07950	0.29	-1.6
1,524,088	+	yaeQ	NIAGMN_07950	0.30	+2.7
1,524,089	-	yaeQ	NIAGMN_07950	0.30	+0.7
1,524,091	-	yaeQ	NIAGMN_07950	0.31	+1.3
1,524,091	-	yaeQ	NIAGMN_07950	0.31	+0.5
1,524,091	-	yaeQ	NIAGMN_07950	0.31	-1.1
1,524,091	-	yaeQ	NIAGMN_07950	0.31	+0.4
1,524,091	-	yaeQ	NIAGMN_07950	0.31	+0.4
1,524,261	+	yaeQ	NIAGMN_07950	0.68	+0.8
1,524,262	-	yaeQ	NIAGMN_07950	0.68	-0.5
1,524,292	+	yaeQ	NIAGMN_07950	0.74	+2.9
1,524,292	+	yaeQ	NIAGMN_07950	0.74	+0.7
1,524,292	+	yaeQ	NIAGMN_07950	0.74	+0.9
1,524,293	-	yaeQ	NIAGMN_07950	0.75	+0.5
1,524,293	-	yaeQ	NIAGMN_07950	0.75	+0.6
1,524,373	+				-0.5
1,524,388	-				-0.4
1,524,400	+				+1.7
1,524,410	-				+0.2
1,524,450	+				+2.8
1,524,450	+				+0.5
1,524,450	+				-0.6
1,524,451	-				-0.5
1,524,491	+				-2.5
1,524,493	+				-0.5
1,524,517	-				+0.3
1,524,517	-				-1.2
1,524,524	+				-2.9
1,524,524	+				-1.7
1,524,525	-				-1.6
1,524,530	+				-1.6
1,524,530	+				+0.1
1,524,530	+				+0.5
1,524,531	-				+0.1
1,524,548	+				+1.2
1,524,584	+				-3.3
1,524,597	+	yaeP	NIAGMN_07955	0.11	-0.0
1,524,597	+	yaeP	NIAGMN_07955	0.11	+2.4
1,524,633	+	yaeP	NIAGMN_07955	0.29	-1.1
1,524,633	+	yaeP	NIAGMN_07955	0.29	-0.1
1,524,634	-	yaeP	NIAGMN_07955	0.29	-1.9
1,524,634	-	yaeP	NIAGMN_07955	0.29	-1.6
1,524,638	+	yaeP	NIAGMN_07955	0.31	-1.3
1,524,638	+	yaeP	NIAGMN_07955	0.31	-2.4
1,524,731	+	yaeP	NIAGMN_07955	0.78	+0.2
1,524,731	+	yaeP	NIAGMN_07955	0.78	-0.4
1,524,747	+	yaeP	NIAGMN_07955	0.86	-0.9
1,524,761	+				+2.6
1,524,776	+				-0.4
1,524,776	+				+0.5
1,524,776	+				-2.5
1,524,780	+				+0.2
1,524,780	+				+2.6
1,524,780	+				-2.3
1,524,780	+				-0.5
1,524,780	+				-0.8
1,524,804	+	rof	NIAGMN_07960	0.16	-0.3
1,524,838	+	rof	NIAGMN_07960	0.29	+0.8
1,524,838	+	rof	NIAGMN_07960	0.29	-0.9
1,524,838	+	rof	NIAGMN_07960	0.29	-1.1