Experiment: L-Arabinose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt gsiD and gsiC are separated by 2 nucleotides gsiC and gsiB are separated by 17 nucleotides gsiB and gsiA are separated by 19 nucleotides
NIAGMN_04130: gsiD - glutathione ABC transporter permease GsiD, at 743,905 to 744,816
gsiD
NIAGMN_04135: gsiC - glutathione ABC transporter permease GsiC, at 744,819 to 745,739
gsiC
NIAGMN_04140: gsiB - glutathione ABC transporter substrate-binding protein GsiB, at 745,757 to 747,295
gsiB
NIAGMN_04145: gsiA - glutathione ABC transporter ATP-binding protein GsiA, at 747,315 to 749,186
gsiA
Position (kb) 745
746
747
748 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 744.820 kb on + strand at 744.821 kb on - strand at 744.821 kb on - strand at 744.821 kb on - strand at 744.854 kb on - strand at 744.871 kb on - strand at 744.885 kb on - strand at 745.127 kb on + strand, within gsiC at 745.128 kb on - strand, within gsiC at 745.128 kb on - strand, within gsiC at 745.128 kb on - strand, within gsiC at 745.129 kb on + strand, within gsiC at 745.129 kb on + strand, within gsiC at 745.140 kb on + strand, within gsiC at 745.141 kb on - strand, within gsiC at 745.215 kb on + strand, within gsiC at 745.223 kb on - strand, within gsiC at 745.279 kb on - strand, within gsiC at 745.279 kb on - strand, within gsiC at 745.407 kb on + strand, within gsiC at 745.538 kb on - strand, within gsiC at 745.538 kb on - strand, within gsiC at 745.556 kb on - strand, within gsiC at 745.596 kb on + strand, within gsiC at 745.597 kb on - strand, within gsiC at 745.655 kb on + strand at 745.656 kb on - strand at 745.656 kb on - strand at 745.656 kb on - strand at 745.714 kb on - strand at 745.729 kb on + strand at 745.730 kb on - strand at 745.734 kb on - strand at 745.734 kb on - strand at 745.759 kb on - strand at 745.903 kb on + strand at 745.903 kb on + strand at 745.904 kb on - strand at 745.904 kb on - strand at 745.905 kb on + strand at 745.906 kb on - strand at 745.906 kb on - strand at 745.906 kb on - strand at 745.906 kb on - strand at 745.906 kb on - strand at 745.907 kb on + strand at 745.907 kb on + strand at 745.908 kb on - strand at 745.980 kb on + strand, within gsiB at 746.080 kb on - strand, within gsiB at 746.114 kb on - strand, within gsiB at 746.231 kb on - strand, within gsiB at 746.310 kb on + strand, within gsiB at 746.326 kb on - strand, within gsiB at 746.326 kb on - strand, within gsiB at 746.326 kb on - strand, within gsiB at 746.365 kb on + strand, within gsiB at 746.366 kb on - strand, within gsiB at 746.380 kb on - strand, within gsiB at 746.480 kb on - strand, within gsiB at 746.486 kb on - strand, within gsiB at 746.486 kb on - strand, within gsiB at 746.487 kb on + strand, within gsiB at 746.497 kb on + strand, within gsiB at 746.734 kb on - strand, within gsiB at 746.908 kb on + strand, within gsiB at 746.908 kb on + strand, within gsiB at 746.910 kb on + strand, within gsiB at 746.911 kb on - strand, within gsiB at 746.926 kb on + strand, within gsiB at 746.926 kb on + strand, within gsiB at 747.034 kb on - strand, within gsiB at 747.037 kb on + strand, within gsiB at 747.059 kb on - strand, within gsiB at 747.165 kb on + strand at 747.282 kb on - strand at 747.317 kb on - strand at 747.317 kb on - strand at 747.317 kb on - strand at 747.320 kb on + strand at 747.320 kb on + strand at 747.359 kb on - strand at 747.420 kb on - strand at 747.420 kb on - strand at 747.447 kb on + strand at 747.510 kb on - strand, within gsiA at 747.512 kb on - strand, within gsiA at 747.574 kb on + strand, within gsiA at 747.575 kb on - strand, within gsiA at 747.575 kb on - strand, within gsiA at 747.575 kb on - strand, within gsiA at 747.575 kb on - strand, within gsiA at 747.575 kb on - strand, within gsiA at 747.575 kb on - strand, within gsiA at 747.575 kb on - strand, within gsiA at 747.617 kb on + strand, within gsiA at 747.638 kb on - strand, within gsiA at 747.879 kb on - strand, within gsiA at 747.879 kb on - strand, within gsiA
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose remove 744,820 + -1.0 744,821 - +1.9 744,821 - +0.4 744,821 - +1.6 744,854 - -0.3 744,871 - +0.5 744,885 - -2.4 745,127 + gsiC NIAGMN_04135 0.33 +1.6 745,128 - gsiC NIAGMN_04135 0.34 -0.2 745,128 - gsiC NIAGMN_04135 0.34 +0.3 745,128 - gsiC NIAGMN_04135 0.34 +0.7 745,129 + gsiC NIAGMN_04135 0.34 -1.3 745,129 + gsiC NIAGMN_04135 0.34 +2.8 745,140 + gsiC NIAGMN_04135 0.35 +2.1 745,141 - gsiC NIAGMN_04135 0.35 +0.1 745,215 + gsiC NIAGMN_04135 0.43 +0.1 745,223 - gsiC NIAGMN_04135 0.44 -0.0 745,279 - gsiC NIAGMN_04135 0.50 +0.3 745,279 - gsiC NIAGMN_04135 0.50 +2.0 745,407 + gsiC NIAGMN_04135 0.64 -3.0 745,538 - gsiC NIAGMN_04135 0.78 -0.1 745,538 - gsiC NIAGMN_04135 0.78 -3.1 745,556 - gsiC NIAGMN_04135 0.80 -1.3 745,596 + gsiC NIAGMN_04135 0.84 +0.8 745,597 - gsiC NIAGMN_04135 0.84 -1.5 745,655 + -0.2 745,656 - -0.6 745,656 - -1.5 745,656 - +2.4 745,714 - -2.1 745,729 + +2.0 745,730 - -0.4 745,734 - -2.1 745,734 - +0.5 745,759 - +2.0 745,903 + +0.5 745,903 + +0.5 745,904 - +0.3 745,904 - -1.5 745,905 + -0.4 745,906 - +0.2 745,906 - -0.6 745,906 - -4.0 745,906 - -1.4 745,906 - -0.5 745,907 + -0.1 745,907 + +0.0 745,908 - +0.9 745,980 + gsiB NIAGMN_04140 0.14 +0.5 746,080 - gsiB NIAGMN_04140 0.21 +0.0 746,114 - gsiB NIAGMN_04140 0.23 +0.6 746,231 - gsiB NIAGMN_04140 0.31 +0.8 746,310 + gsiB NIAGMN_04140 0.36 +0.0 746,326 - gsiB NIAGMN_04140 0.37 -0.0 746,326 - gsiB NIAGMN_04140 0.37 +1.4 746,326 - gsiB NIAGMN_04140 0.37 -0.8 746,365 + gsiB NIAGMN_04140 0.40 -0.4 746,366 - gsiB NIAGMN_04140 0.40 +0.2 746,380 - gsiB NIAGMN_04140 0.40 -0.0 746,480 - gsiB NIAGMN_04140 0.47 +1.5 746,486 - gsiB NIAGMN_04140 0.47 -0.9 746,486 - gsiB NIAGMN_04140 0.47 -1.4 746,487 + gsiB NIAGMN_04140 0.47 -1.6 746,497 + gsiB NIAGMN_04140 0.48 -0.9 746,734 - gsiB NIAGMN_04140 0.63 -3.3 746,908 + gsiB NIAGMN_04140 0.75 -1.5 746,908 + gsiB NIAGMN_04140 0.75 -0.4 746,910 + gsiB NIAGMN_04140 0.75 -0.2 746,911 - gsiB NIAGMN_04140 0.75 -0.1 746,926 + gsiB NIAGMN_04140 0.76 -0.5 746,926 + gsiB NIAGMN_04140 0.76 +0.5 747,034 - gsiB NIAGMN_04140 0.83 +0.5 747,037 + gsiB NIAGMN_04140 0.83 -0.3 747,059 - gsiB NIAGMN_04140 0.85 +3.1 747,165 + -0.9 747,282 - -0.2 747,317 - -0.7 747,317 - -1.3 747,317 - -0.7 747,320 + -2.3 747,320 + +2.2 747,359 - -0.4 747,420 - +0.1 747,420 - -0.5 747,447 + +0.6 747,510 - gsiA NIAGMN_04145 0.10 -0.3 747,512 - gsiA NIAGMN_04145 0.11 -0.5 747,574 + gsiA NIAGMN_04145 0.14 +0.5 747,575 - gsiA NIAGMN_04145 0.14 -0.9 747,575 - gsiA NIAGMN_04145 0.14 +0.7 747,575 - gsiA NIAGMN_04145 0.14 +1.6 747,575 - gsiA NIAGMN_04145 0.14 -0.2 747,575 - gsiA NIAGMN_04145 0.14 -0.1 747,575 - gsiA NIAGMN_04145 0.14 -2.4 747,575 - gsiA NIAGMN_04145 0.14 -0.7 747,617 + gsiA NIAGMN_04145 0.16 -0.4 747,638 - gsiA NIAGMN_04145 0.17 -1.4 747,879 - gsiA NIAGMN_04145 0.30 -1.7 747,879 - gsiA NIAGMN_04145 0.30 -1.1
Or see this region's nucleotide sequence