Strain Fitness in Escherichia coli ECRC101 around MCAODC_25545

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
1,833,653	-	ybhQ	MCAODC_25535	0.87	-0.4
1,833,669	-				-1.0
1,833,737	+				-2.5
1,833,738	-				+0.7
1,833,738	-				+0.0
1,833,770	+				+1.5
1,833,799	-				+0.9
1,833,803	+				-0.3
1,833,804	-				+0.3
1,833,804	-				+1.1
1,833,804	-				+0.3
1,833,816	+				+0.9
1,833,817	-				+1.3
1,833,839	-				+0.5
1,834,046	+	ybhP	MCAODC_25540	0.27	-0.2
1,834,066	+	ybhP	MCAODC_25540	0.30	-0.5
1,834,066	+	ybhP	MCAODC_25540	0.30	+1.5
1,834,067	-	ybhP	MCAODC_25540	0.30	-1.9
1,834,067	-	ybhP	MCAODC_25540	0.30	-0.8
1,834,067	-	ybhP	MCAODC_25540	0.30	-2.0
1,834,101	+	ybhP	MCAODC_25540	0.34	+1.4
1,834,103	+	ybhP	MCAODC_25540	0.35	+0.4
1,834,131	+	ybhP	MCAODC_25540	0.38	-0.0
1,834,208	+	ybhP	MCAODC_25540	0.48	-3.3
1,834,260	+	ybhP	MCAODC_25540	0.55	-1.4
1,834,260	+	ybhP	MCAODC_25540	0.55	-2.0
1,834,260	+	ybhP	MCAODC_25540	0.55	-0.8
1,834,260	+	ybhP	MCAODC_25540	0.55	+0.6
1,834,260	+	ybhP	MCAODC_25540	0.55	+0.2
1,834,261	-	ybhP	MCAODC_25540	0.55	-0.2
1,834,261	-	ybhP	MCAODC_25540	0.55	-0.3
1,834,329	+	ybhP	MCAODC_25540	0.64	-1.5
1,834,388	-	ybhP	MCAODC_25540	0.72	-0.0
1,834,388	-	ybhP	MCAODC_25540	0.72	-1.9
1,834,399	-	ybhP	MCAODC_25540	0.73	+2.1
1,834,482	+	ybhP	MCAODC_25540	0.84	+0.9
1,834,499	+	ybhP	MCAODC_25540	0.87	-0.6
1,834,500	-	ybhP	MCAODC_25540	0.87	+0.9
1,834,579	-				-0.5
1,834,597	-				+1.3
1,834,605	+				-2.1
1,834,606	-				-1.2
1,834,623	+				+1.0
1,834,654	+				-0.4
1,834,717	-				-0.2
1,834,810	+	clsB	MCAODC_25545	0.17	-1.0
1,834,865	+	clsB	MCAODC_25545	0.22	+2.0
1,834,879	+	clsB	MCAODC_25545	0.23	+0.8
1,835,001	+	clsB	MCAODC_25545	0.33	-3.4
1,835,001	+	clsB	MCAODC_25545	0.33	-2.7
1,835,001	+	clsB	MCAODC_25545	0.33	+1.4
1,835,002	-	clsB	MCAODC_25545	0.33	-0.7
1,835,025	+	clsB	MCAODC_25545	0.34	-0.8
1,835,026	-	clsB	MCAODC_25545	0.35	+0.6
1,835,035	+	clsB	MCAODC_25545	0.35	+0.5
1,835,070	+	clsB	MCAODC_25545	0.38	-0.7
1,835,070	+	clsB	MCAODC_25545	0.38	+0.1
1,835,071	-	clsB	MCAODC_25545	0.38	+1.0
1,835,071	-	clsB	MCAODC_25545	0.38	+0.3
1,835,177	+	clsB	MCAODC_25545	0.47	+0.3
1,835,177	+	clsB	MCAODC_25545	0.47	-1.4
1,835,177	+	clsB	MCAODC_25545	0.47	+1.4
1,835,178	-	clsB	MCAODC_25545	0.47	+0.5
1,835,407	+	clsB	MCAODC_25545	0.65	-0.2
1,835,409	+	clsB	MCAODC_25545	0.65	+0.5
1,835,409	+	clsB	MCAODC_25545	0.65	+1.6
1,835,409	+	clsB	MCAODC_25545	0.65	+2.1
1,835,409	+	clsB	MCAODC_25545	0.65	+1.2
1,835,409	+	clsB	MCAODC_25545	0.65	+0.6
1,835,409	+	clsB	MCAODC_25545	0.65	-1.7
1,835,410	-	clsB	MCAODC_25545	0.65	+0.6
1,835,410	-	clsB	MCAODC_25545	0.65	-2.5
1,835,413	+	clsB	MCAODC_25545	0.66	+0.1
1,835,414	-	clsB	MCAODC_25545	0.66	-0.9
1,835,505	-	clsB	MCAODC_25545	0.73	-1.2
1,835,614	-	clsB	MCAODC_25545	0.82	+0.0
1,835,675	+	clsB	MCAODC_25545	0.87	-0.6
1,835,705	+	clsB	MCAODC_25545	0.89	-1.6
1,835,867	-				+1.1
1,835,925	+				-2.8
1,836,039	+	ybhN	MCAODC_25550	0.21	+0.5
1,836,039	+	ybhN	MCAODC_25550	0.21	-0.2
1,836,040	-	ybhN	MCAODC_25550	0.21	+2.1
1,836,138	-	ybhN	MCAODC_25550	0.31	-0.8
1,836,230	+	ybhN	MCAODC_25550	0.41	+0.4
1,836,230	+	ybhN	MCAODC_25550	0.41	-1.0
1,836,269	+	ybhN	MCAODC_25550	0.45	-0.3
1,836,309	+	ybhN	MCAODC_25550	0.49	-2.6
1,836,309	+	ybhN	MCAODC_25550	0.49	-0.9
1,836,309	+	ybhN	MCAODC_25550	0.49	-0.4
1,836,323	+	ybhN	MCAODC_25550	0.51	-0.1
1,836,323	+	ybhN	MCAODC_25550	0.51	+0.4
1,836,323	+	ybhN	MCAODC_25550	0.51	-1.0
1,836,323	+	ybhN	MCAODC_25550	0.51	-0.1
1,836,324	-	ybhN	MCAODC_25550	0.51	+1.9
1,836,324	-	ybhN	MCAODC_25550	0.51	-1.8
1,836,324	-	ybhN	MCAODC_25550	0.51	-1.0
1,836,370	-	ybhN	MCAODC_25550	0.56	+0.4
1,836,504	-	ybhN	MCAODC_25550	0.70	+0.0
1,836,504	-	ybhN	MCAODC_25550	0.70	-0.2
1,836,515	-	ybhN	MCAODC_25550	0.71	+1.0
1,836,515	-	ybhN	MCAODC_25550	0.71	+0.6
1,836,534	+	ybhN	MCAODC_25550	0.73	-0.4
1,836,535	-	ybhN	MCAODC_25550	0.73	+0.3
1,836,535	-	ybhN	MCAODC_25550	0.73	-0.7
1,836,544	+	ybhN	MCAODC_25550	0.74	+1.4
1,836,569	+	ybhN	MCAODC_25550	0.76	+0.4
1,836,650	+	ybhN	MCAODC_25550	0.85	-0.1
1,836,651	-	ybhN	MCAODC_25550	0.85	+0.3
1,836,651	-	ybhN	MCAODC_25550	0.85	-2.1
1,836,651	-	ybhN	MCAODC_25550	0.85	+1.3
1,836,651	-	ybhN	MCAODC_25550	0.85	-0.4
1,836,699	+				-3.4
1,836,702	+				-1.1
1,836,702	+				-3.2
1,836,703	-				-0.3
1,836,707	+				+0.5
1,836,735	+				+2.8
1,836,767	-				-2.8
1,836,799	+				-1.4
1,836,804	-				-1.1
1,836,813	-				+0.4
1,836,825	+				-0.6
1,836,831	+				-1.9