Strain Fitness in Escherichia coli ECRC101 around MCAODC_13575

Experiment: L-Arabinose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMCAODC_13570 and fadL are separated by 364 nucleotidesfadL and yfcZ are separated by 371 nucleotidesyfcZ and fadI are separated by 179 nucleotides MCAODC_13570: MCAODC_13570 - Uncharacterized protein YfdF, at 2,656,768 to 2,657,799 _13570 MCAODC_13575: fadL - long-chain fatty acid transporter FadL, at 2,658,164 to 2,659,504 fadL MCAODC_13580: yfcZ - UPF0381 protein YfcZ, at 2,659,876 to 2,660,160 yfcZ MCAODC_13585: fadI - acetyl-CoA C-acyltransferase FadI, at 2,660,340 to 2,661,650 fadI Position (kb) 2658 2659 2660Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2657.421 kb on + strand, within MCAODC_13570at 2657.737 kb on - strandat 2657.835 kb on + strandat 2657.844 kb on + strandat 2657.991 kb on - strandat 2658.119 kb on - strandat 2658.174 kb on + strandat 2658.175 kb on - strandat 2658.184 kb on + strandat 2658.185 kb on - strandat 2658.206 kb on - strandat 2658.262 kb on + strandat 2658.263 kb on - strandat 2658.263 kb on - strandat 2658.264 kb on + strandat 2658.264 kb on + strandat 2658.264 kb on + strandat 2658.265 kb on - strandat 2658.296 kb on - strandat 2658.306 kb on + strand, within fadLat 2658.306 kb on + strand, within fadLat 2658.307 kb on - strand, within fadLat 2658.355 kb on + strand, within fadLat 2658.355 kb on + strand, within fadLat 2658.418 kb on + strand, within fadLat 2658.419 kb on - strand, within fadLat 2658.419 kb on - strand, within fadLat 2658.426 kb on + strand, within fadLat 2658.430 kb on - strand, within fadLat 2658.430 kb on - strand, within fadLat 2658.432 kb on + strand, within fadLat 2658.432 kb on + strand, within fadLat 2658.433 kb on - strand, within fadLat 2658.466 kb on + strand, within fadLat 2658.467 kb on - strand, within fadLat 2658.546 kb on + strand, within fadLat 2658.547 kb on - strand, within fadLat 2658.556 kb on + strand, within fadLat 2658.558 kb on + strand, within fadLat 2658.589 kb on + strand, within fadLat 2658.591 kb on + strand, within fadLat 2658.591 kb on + strand, within fadLat 2658.592 kb on - strand, within fadLat 2658.681 kb on + strand, within fadLat 2658.681 kb on + strand, within fadLat 2658.682 kb on - strand, within fadLat 2658.682 kb on - strand, within fadLat 2658.682 kb on - strand, within fadLat 2658.682 kb on - strand, within fadLat 2658.686 kb on - strand, within fadLat 2658.689 kb on - strand, within fadLat 2658.714 kb on + strand, within fadLat 2658.714 kb on + strand, within fadLat 2658.714 kb on + strand, within fadLat 2658.715 kb on - strand, within fadLat 2658.715 kb on - strand, within fadLat 2658.718 kb on + strand, within fadLat 2658.718 kb on + strand, within fadLat 2658.751 kb on - strand, within fadLat 2658.763 kb on - strand, within fadLat 2658.763 kb on - strand, within fadLat 2658.850 kb on + strand, within fadLat 2658.872 kb on - strand, within fadLat 2658.919 kb on + strand, within fadLat 2658.982 kb on - strand, within fadLat 2659.018 kb on + strand, within fadLat 2659.041 kb on - strand, within fadLat 2659.072 kb on + strand, within fadLat 2659.073 kb on - strand, within fadLat 2659.073 kb on - strand, within fadLat 2659.095 kb on + strand, within fadLat 2659.095 kb on + strand, within fadLat 2659.096 kb on - strand, within fadLat 2659.099 kb on + strand, within fadLat 2659.100 kb on - strand, within fadLat 2659.100 kb on - strand, within fadLat 2659.125 kb on + strand, within fadLat 2659.125 kb on + strand, within fadLat 2659.125 kb on + strand, within fadLat 2659.126 kb on - strand, within fadLat 2659.126 kb on - strand, within fadLat 2659.126 kb on - strand, within fadLat 2659.129 kb on + strand, within fadLat 2659.130 kb on - strand, within fadLat 2659.130 kb on - strand, within fadLat 2659.130 kb on - strand, within fadLat 2659.135 kb on + strand, within fadLat 2659.135 kb on + strand, within fadLat 2659.136 kb on - strand, within fadLat 2659.138 kb on + strand, within fadLat 2659.138 kb on + strand, within fadLat 2659.138 kb on + strand, within fadLat 2659.138 kb on + strand, within fadLat 2659.139 kb on - strand, within fadLat 2659.139 kb on - strand, within fadLat 2659.262 kb on + strand, within fadLat 2659.263 kb on - strand, within fadLat 2659.263 kb on - strand, within fadLat 2659.277 kb on - strand, within fadLat 2659.278 kb on + strand, within fadLat 2659.279 kb on - strand, within fadLat 2659.450 kb on + strandat 2659.451 kb on - strandat 2659.451 kb on - strandat 2659.451 kb on - strandat 2659.530 kb on + strandat 2659.532 kb on + strandat 2659.539 kb on + strandat 2659.539 kb on + strandat 2659.539 kb on + strandat 2659.539 kb on + strandat 2659.544 kb on + strandat 2659.544 kb on + strandat 2659.544 kb on + strandat 2659.545 kb on - strandat 2659.545 kb on - strandat 2659.553 kb on + strandat 2659.571 kb on + strandat 2659.571 kb on + strandat 2659.583 kb on + strandat 2659.584 kb on - strandat 2659.590 kb on + strandat 2659.614 kb on + strandat 2659.614 kb on + strandat 2659.616 kb on + strandat 2659.616 kb on + strandat 2659.789 kb on + strandat 2659.824 kb on + strandat 2659.859 kb on + strandat 2659.859 kb on + strandat 2659.859 kb on + strandat 2659.860 kb on - strandat 2659.860 kb on - strandat 2659.860 kb on - strandat 2659.881 kb on + strandat 2659.882 kb on - strandat 2659.882 kb on - strandat 2659.882 kb on - strandat 2659.887 kb on + strandat 2659.887 kb on + strandat 2659.887 kb on + strandat 2659.888 kb on - strandat 2659.888 kb on - strandat 2659.888 kb on - strandat 2659.917 kb on + strand, within yfcZat 2660.159 kb on - strandat 2660.172 kb on + strandat 2660.173 kb on - strandat 2660.176 kb on + strandat 2660.176 kb on + strandat 2660.176 kb on + strandat 2660.176 kb on + strandat 2660.176 kb on + strandat 2660.176 kb on + strandat 2660.176 kb on + strandat 2660.177 kb on - strandat 2660.177 kb on - strandat 2660.238 kb on + strandat 2660.238 kb on + strandat 2660.239 kb on - strandat 2660.239 kb on - strandat 2660.239 kb on - strandat 2660.239 kb on - strandat 2660.314 kb on + strandat 2660.381 kb on + strandat 2660.393 kb on + strandat 2660.402 kb on - strandat 2660.459 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arabinose
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2,657,421 + MCAODC_13570 0.63 +1.0
2,657,737 - +0.7
2,657,835 + -0.1
2,657,844 + -0.5
2,657,991 - -1.4
2,658,119 - +1.8
2,658,174 + +0.5
2,658,175 - +0.2
2,658,184 + -2.6
2,658,185 - +0.6
2,658,206 - +0.8
2,658,262 + +0.3
2,658,263 - -0.0
2,658,263 - +0.2
2,658,264 + -1.2
2,658,264 + +1.5
2,658,264 + -0.5
2,658,265 - +0.1
2,658,296 - +0.6
2,658,306 + fadL MCAODC_13575 0.11 -0.6
2,658,306 + fadL MCAODC_13575 0.11 -0.9
2,658,307 - fadL MCAODC_13575 0.11 -0.0
2,658,355 + fadL MCAODC_13575 0.14 -3.7
2,658,355 + fadL MCAODC_13575 0.14 +0.2
2,658,418 + fadL MCAODC_13575 0.19 +1.7
2,658,419 - fadL MCAODC_13575 0.19 +1.3
2,658,419 - fadL MCAODC_13575 0.19 -2.4
2,658,426 + fadL MCAODC_13575 0.20 -0.1
2,658,430 - fadL MCAODC_13575 0.20 -2.3
2,658,430 - fadL MCAODC_13575 0.20 +0.4
2,658,432 + fadL MCAODC_13575 0.20 -0.4
2,658,432 + fadL MCAODC_13575 0.20 +0.7
2,658,433 - fadL MCAODC_13575 0.20 -2.1
2,658,466 + fadL MCAODC_13575 0.23 -0.2
2,658,467 - fadL MCAODC_13575 0.23 -2.5
2,658,546 + fadL MCAODC_13575 0.28 +0.7
2,658,547 - fadL MCAODC_13575 0.29 +0.4
2,658,556 + fadL MCAODC_13575 0.29 +0.8
2,658,558 + fadL MCAODC_13575 0.29 -1.2
2,658,589 + fadL MCAODC_13575 0.32 -0.6
2,658,591 + fadL MCAODC_13575 0.32 +0.3
2,658,591 + fadL MCAODC_13575 0.32 -0.5
2,658,592 - fadL MCAODC_13575 0.32 +0.8
2,658,681 + fadL MCAODC_13575 0.39 +0.1
2,658,681 + fadL MCAODC_13575 0.39 +1.8
2,658,682 - fadL MCAODC_13575 0.39 +0.1
2,658,682 - fadL MCAODC_13575 0.39 -1.0
2,658,682 - fadL MCAODC_13575 0.39 +0.2
2,658,682 - fadL MCAODC_13575 0.39 -2.5
2,658,686 - fadL MCAODC_13575 0.39 +0.6
2,658,689 - fadL MCAODC_13575 0.39 -0.2
2,658,714 + fadL MCAODC_13575 0.41 +0.1
2,658,714 + fadL MCAODC_13575 0.41 +0.6
2,658,714 + fadL MCAODC_13575 0.41 -2.0
2,658,715 - fadL MCAODC_13575 0.41 +0.6
2,658,715 - fadL MCAODC_13575 0.41 +0.1
2,658,718 + fadL MCAODC_13575 0.41 -0.3
2,658,718 + fadL MCAODC_13575 0.41 -2.9
2,658,751 - fadL MCAODC_13575 0.44 +1.7
2,658,763 - fadL MCAODC_13575 0.45 -1.5
2,658,763 - fadL MCAODC_13575 0.45 -0.7
2,658,850 + fadL MCAODC_13575 0.51 +1.0
2,658,872 - fadL MCAODC_13575 0.53 +0.5
2,658,919 + fadL MCAODC_13575 0.56 -0.2
2,658,982 - fadL MCAODC_13575 0.61 -1.4
2,659,018 + fadL MCAODC_13575 0.64 +0.9
2,659,041 - fadL MCAODC_13575 0.65 -0.6
2,659,072 + fadL MCAODC_13575 0.68 +0.6
2,659,073 - fadL MCAODC_13575 0.68 +0.3
2,659,073 - fadL MCAODC_13575 0.68 +1.5
2,659,095 + fadL MCAODC_13575 0.69 +0.9
2,659,095 + fadL MCAODC_13575 0.69 -0.4
2,659,096 - fadL MCAODC_13575 0.70 +0.1
2,659,099 + fadL MCAODC_13575 0.70 +0.4
2,659,100 - fadL MCAODC_13575 0.70 -3.6
2,659,100 - fadL MCAODC_13575 0.70 +0.2
2,659,125 + fadL MCAODC_13575 0.72 -0.7
2,659,125 + fadL MCAODC_13575 0.72 -0.0
2,659,125 + fadL MCAODC_13575 0.72 +0.7
2,659,126 - fadL MCAODC_13575 0.72 +0.6
2,659,126 - fadL MCAODC_13575 0.72 +1.3
2,659,126 - fadL MCAODC_13575 0.72 +1.5
2,659,129 + fadL MCAODC_13575 0.72 +1.0
2,659,130 - fadL MCAODC_13575 0.72 +0.6
2,659,130 - fadL MCAODC_13575 0.72 -0.4
2,659,130 - fadL MCAODC_13575 0.72 +1.6
2,659,135 + fadL MCAODC_13575 0.72 -0.3
2,659,135 + fadL MCAODC_13575 0.72 +1.1
2,659,136 - fadL MCAODC_13575 0.72 -0.5
2,659,138 + fadL MCAODC_13575 0.73 +0.3
2,659,138 + fadL MCAODC_13575 0.73 -1.1
2,659,138 + fadL MCAODC_13575 0.73 +2.9
2,659,138 + fadL MCAODC_13575 0.73 +0.1
2,659,139 - fadL MCAODC_13575 0.73 +0.8
2,659,139 - fadL MCAODC_13575 0.73 +0.9
2,659,262 + fadL MCAODC_13575 0.82 -0.8
2,659,263 - fadL MCAODC_13575 0.82 +0.6
2,659,263 - fadL MCAODC_13575 0.82 -0.3
2,659,277 - fadL MCAODC_13575 0.83 +1.1
2,659,278 + fadL MCAODC_13575 0.83 +1.2
2,659,279 - fadL MCAODC_13575 0.83 +0.0
2,659,450 + +1.8
2,659,451 - -0.0
2,659,451 - -0.3
2,659,451 - -2.7
2,659,530 + -0.2
2,659,532 + +0.3
2,659,539 + +0.9
2,659,539 + -0.2
2,659,539 + -2.8
2,659,539 + -0.8
2,659,544 + +0.4
2,659,544 + -0.0
2,659,544 + +0.7
2,659,545 - +1.1
2,659,545 - +0.6
2,659,553 + +0.1
2,659,571 + +0.2
2,659,571 + -0.9
2,659,583 + +0.7
2,659,584 - +2.3
2,659,590 + -2.1
2,659,614 + -0.2
2,659,614 + +0.7
2,659,616 + +0.9
2,659,616 + +0.5
2,659,789 + -0.7
2,659,824 + -1.6
2,659,859 + +1.2
2,659,859 + +0.2
2,659,859 + +0.9
2,659,860 - -0.4
2,659,860 - -2.1
2,659,860 - +0.7
2,659,881 + -1.8
2,659,882 - +1.0
2,659,882 - +2.5
2,659,882 - +1.0
2,659,887 + -0.4
2,659,887 + +1.8
2,659,887 + +0.3
2,659,888 - +1.0
2,659,888 - +0.2
2,659,888 - -0.0
2,659,917 + yfcZ MCAODC_13580 0.14 +0.5
2,660,159 - +1.6
2,660,172 + +0.5
2,660,173 - -1.9
2,660,176 + +1.0
2,660,176 + +0.4
2,660,176 + +0.1
2,660,176 + +0.1
2,660,176 + +0.1
2,660,176 + +0.1
2,660,176 + +0.1
2,660,177 - +0.1
2,660,177 - +0.3
2,660,238 + +1.2
2,660,238 + +0.0
2,660,239 - -0.5
2,660,239 - -1.6
2,660,239 - -1.0
2,660,239 - +0.7
2,660,314 + +0.8
2,660,381 + +0.8
2,660,393 + -2.7
2,660,402 - -0.3
2,660,459 - -1.0

Or see this region's nucleotide sequence