Strain Fitness in Escherichia coli ECRC101 around MCAODC_10050

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
1,997,707	+	gcvT	MCAODC_10040	0.64	+1.4
1,997,894	+	gcvT	MCAODC_10040	0.81	-0.3
1,997,935	-	gcvT	MCAODC_10040	0.85	+1.7
1,997,935	-	gcvT	MCAODC_10040	0.85	+0.9
1,997,968	+	gcvT	MCAODC_10040	0.88	-0.6
1,997,969	-	gcvT	MCAODC_10040	0.88	-0.5
1,998,048	+				-4.4
1,998,048	+				-0.1
1,998,174	-	gcvH	MCAODC_10045	0.14	+1.6
1,998,174	-	gcvH	MCAODC_10045	0.14	+0.7
1,998,192	+	gcvH	MCAODC_10045	0.18	-0.3
1,998,192	+	gcvH	MCAODC_10045	0.18	-0.1
1,998,192	+	gcvH	MCAODC_10045	0.18	+0.2
1,998,193	-	gcvH	MCAODC_10045	0.19	+1.2
1,998,193	-	gcvH	MCAODC_10045	0.19	-0.3
1,998,193	-	gcvH	MCAODC_10045	0.19	-0.6
1,998,203	+	gcvH	MCAODC_10045	0.21	+0.7
1,998,204	-	gcvH	MCAODC_10045	0.22	+0.0
1,998,204	-	gcvH	MCAODC_10045	0.22	+0.0
1,998,236	+	gcvH	MCAODC_10045	0.30	-3.1
1,998,330	+	gcvH	MCAODC_10045	0.54	-0.6
1,998,331	-	gcvH	MCAODC_10045	0.54	-0.3
1,998,340	+	gcvH	MCAODC_10045	0.56	-1.1
1,998,341	-	gcvH	MCAODC_10045	0.57	-0.3
1,998,408	+	gcvH	MCAODC_10045	0.74	-0.8
1,998,483	+				+0.8
1,998,496	+				+0.6
1,998,497	-				-2.6
1,998,507	+				-0.2
1,998,516	+				+1.2
1,998,517	-				-0.1
1,998,517	-				-0.9
1,998,556	-				+0.7
1,998,739	+				-0.3
1,998,740	-				-0.1
1,998,774	-				-0.3
1,998,861	-				-0.9
1,998,876	+				-0.8
1,998,876	+				-3.0
1,998,877	-				-0.3
1,998,891	+				-0.4
1,998,891	+				+0.8
1,998,892	-				+1.2
1,998,926	+	gcvP	MCAODC_10050	0.10	+1.0
1,998,926	+	gcvP	MCAODC_10050	0.10	-0.7
1,998,927	-	gcvP	MCAODC_10050	0.10	-0.2
1,998,927	-	gcvP	MCAODC_10050	0.10	-0.2
1,998,960	+	gcvP	MCAODC_10050	0.12	-0.5
1,998,962	+	gcvP	MCAODC_10050	0.12	+1.7
1,998,963	-	gcvP	MCAODC_10050	0.12	+2.2
1,998,963	-	gcvP	MCAODC_10050	0.12	-1.6
1,998,963	-	gcvP	MCAODC_10050	0.12	-1.5
1,998,963	-	gcvP	MCAODC_10050	0.12	-3.6
1,998,963	-	gcvP	MCAODC_10050	0.12	-0.0
1,999,037	-	gcvP	MCAODC_10050	0.14	-0.0
1,999,276	+	gcvP	MCAODC_10050	0.23	-3.6
1,999,370	+	gcvP	MCAODC_10050	0.26	+0.7
1,999,371	-	gcvP	MCAODC_10050	0.26	+0.4
1,999,373	+	gcvP	MCAODC_10050	0.26	+0.9
1,999,373	+	gcvP	MCAODC_10050	0.26	+1.0
1,999,390	+	gcvP	MCAODC_10050	0.27	+1.8
1,999,504	-	gcvP	MCAODC_10050	0.31	-0.0
1,999,526	+	gcvP	MCAODC_10050	0.31	+3.9
1,999,538	-	gcvP	MCAODC_10050	0.32	-2.6
1,999,598	+	gcvP	MCAODC_10050	0.34	+1.0
1,999,598	+	gcvP	MCAODC_10050	0.34	+0.0
1,999,599	-	gcvP	MCAODC_10050	0.34	-0.7
1,999,599	-	gcvP	MCAODC_10050	0.34	-1.8
1,999,599	-	gcvP	MCAODC_10050	0.34	+0.4
1,999,631	+	gcvP	MCAODC_10050	0.35	+0.3
1,999,631	+	gcvP	MCAODC_10050	0.35	+0.6
1,999,632	-	gcvP	MCAODC_10050	0.35	-0.9
1,999,632	-	gcvP	MCAODC_10050	0.35	-4.2
1,999,632	-	gcvP	MCAODC_10050	0.35	-0.6
1,999,632	-	gcvP	MCAODC_10050	0.35	-0.2
1,999,668	+	gcvP	MCAODC_10050	0.36	-2.3
1,999,668	+	gcvP	MCAODC_10050	0.36	+0.4
1,999,669	-	gcvP	MCAODC_10050	0.36	+1.7
1,999,669	-	gcvP	MCAODC_10050	0.36	-1.2
1,999,669	-	gcvP	MCAODC_10050	0.36	+3.8
1,999,704	-	gcvP	MCAODC_10050	0.37	-2.2
1,999,704	-	gcvP	MCAODC_10050	0.37	-1.5
1,999,704	-	gcvP	MCAODC_10050	0.37	+1.2
1,999,785	+	gcvP	MCAODC_10050	0.40	+0.9
1,999,785	+	gcvP	MCAODC_10050	0.40	+2.7
1,999,786	-	gcvP	MCAODC_10050	0.40	+0.8
1,999,942	+	gcvP	MCAODC_10050	0.46	+0.1
1,999,942	+	gcvP	MCAODC_10050	0.46	+0.2
1,999,943	-	gcvP	MCAODC_10050	0.46	+0.8
1,999,945	+	gcvP	MCAODC_10050	0.46	+0.2
1,999,946	-	gcvP	MCAODC_10050	0.46	+0.3
2,000,012	+	gcvP	MCAODC_10050	0.48	-0.5
2,000,098	-	gcvP	MCAODC_10050	0.51	+0.7
2,000,098	-	gcvP	MCAODC_10050	0.51	-0.7
2,000,099	+	gcvP	MCAODC_10050	0.51	-0.6
2,000,099	+	gcvP	MCAODC_10050	0.51	-0.8
2,000,099	+	gcvP	MCAODC_10050	0.51	-0.1
2,000,099	+	gcvP	MCAODC_10050	0.51	-0.9
2,000,099	+	gcvP	MCAODC_10050	0.51	-1.3
2,000,099	+	gcvP	MCAODC_10050	0.51	+0.3
2,000,099	+	gcvP	MCAODC_10050	0.51	-0.5
2,000,099	+	gcvP	MCAODC_10050	0.51	-0.9
2,000,099	+	gcvP	MCAODC_10050	0.51	+1.3
2,000,100	-	gcvP	MCAODC_10050	0.51	+0.4
2,000,100	-	gcvP	MCAODC_10050	0.51	+0.1
2,000,118	-	gcvP	MCAODC_10050	0.52	+1.0
2,000,324	+	gcvP	MCAODC_10050	0.59	+0.5
2,000,465	+	gcvP	MCAODC_10050	0.64	+0.0
2,000,466	-	gcvP	MCAODC_10050	0.64	-0.1
2,000,466	-	gcvP	MCAODC_10050	0.64	+0.1
2,000,559	-	gcvP	MCAODC_10050	0.67	+0.4
2,000,559	-	gcvP	MCAODC_10050	0.67	+0.4
2,000,583	+	gcvP	MCAODC_10050	0.68	-1.2
2,000,583	+	gcvP	MCAODC_10050	0.68	-1.1
2,000,584	-	gcvP	MCAODC_10050	0.68	+0.5
2,000,605	-	gcvP	MCAODC_10050	0.69	-0.7
2,000,605	-	gcvP	MCAODC_10050	0.69	+2.0
2,000,661	+	gcvP	MCAODC_10050	0.71	-0.4
2,000,738	+	gcvP	MCAODC_10050	0.73	+0.5
2,000,838	-	gcvP	MCAODC_10050	0.77	+0.2
2,000,838	-	gcvP	MCAODC_10050	0.77	-0.3
2,000,910	-	gcvP	MCAODC_10050	0.79	-0.6
2,000,931	+	gcvP	MCAODC_10050	0.80	-1.5
2,000,931	+	gcvP	MCAODC_10050	0.80	+0.9
2,000,931	+	gcvP	MCAODC_10050	0.80	+0.6
2,000,931	+	gcvP	MCAODC_10050	0.80	+1.1
2,000,932	-	gcvP	MCAODC_10050	0.80	+0.7
2,000,997	+	gcvP	MCAODC_10050	0.82	-0.6
2,000,997	+	gcvP	MCAODC_10050	0.82	-0.1
2,000,997	+	gcvP	MCAODC_10050	0.82	-2.2
2,000,997	+	gcvP	MCAODC_10050	0.82	+0.0
2,000,997	+	gcvP	MCAODC_10050	0.82	-0.0
2,000,997	+	gcvP	MCAODC_10050	0.82	+0.4
2,000,997	+	gcvP	MCAODC_10050	0.82	-0.4
2,000,997	+	gcvP	MCAODC_10050	0.82	+0.0
2,000,997	+	gcvP	MCAODC_10050	0.82	+0.7
2,000,997	+	gcvP	MCAODC_10050	0.82	+0.0
2,000,998	-	gcvP	MCAODC_10050	0.82	-2.7
2,000,998	-	gcvP	MCAODC_10050	0.82	-0.5
2,000,998	-	gcvP	MCAODC_10050	0.82	-1.2
2,000,998	-	gcvP	MCAODC_10050	0.82	-1.1
2,000,998	-	gcvP	MCAODC_10050	0.82	-1.2
2,000,998	-	gcvP	MCAODC_10050	0.82	+1.0
2,001,036	+	gcvP	MCAODC_10050	0.84	-1.6
2,001,036	+	gcvP	MCAODC_10050	0.84	-0.6
2,001,037	-	gcvP	MCAODC_10050	0.84	-3.2
2,001,037	-	gcvP	MCAODC_10050	0.84	+1.3
2,001,037	-	gcvP	MCAODC_10050	0.84	-0.3
2,001,037	-	gcvP	MCAODC_10050	0.84	+0.1
2,001,037	-	gcvP	MCAODC_10050	0.84	+0.1
2,001,038	+	gcvP	MCAODC_10050	0.84	-2.2
2,001,071	+	gcvP	MCAODC_10050	0.85	-1.7
2,001,071	+	gcvP	MCAODC_10050	0.85	-1.9
2,001,072	-	gcvP	MCAODC_10050	0.85	+1.1
2,001,369	+				-0.9
2,001,414	+				-0.6
2,001,414	+				-0.1
2,001,414	+				+0.2
2,001,458	+				+0.4
2,001,499	-				-0.1
2,001,522	+				+0.2
2,001,523	-				+1.8
2,001,544	+				-0.5
2,001,545	-				-2.6
2,001,555	+				+0.3
2,001,587	+				-1.3
2,001,587	+				+0.2
2,001,587	+				+0.5
2,001,587	+				+0.7
2,001,587	+				-1.2
2,001,588	-				+1.0
2,001,588	-				-1.1
2,001,588	-				+0.3
2,001,588	-				+1.1
2,001,592	+				-1.2
2,001,593	-				-0.5
2,001,593	-				+0.2
2,001,593	-				+0.8
2,001,597	+				+0.5
2,001,612	-				-0.7
2,001,613	+				+0.5
2,001,614	-				-1.0
2,001,614	-				-2.6
2,001,616	+				-0.4
2,001,617	-				-0.5
2,001,617	-				-1.6
2,001,667	+				+0.8
2,001,668	-				+0.4
2,001,668	-				+1.2
2,001,668	-				+0.7
2,001,711	-				+0.3
2,001,722	+				+2.4
2,001,722	+				+0.7
2,001,722	+				-0.3
2,001,722	+				-0.7
2,001,737	+				-0.6
2,001,737	+				-1.1
2,001,738	-				+0.6
2,001,761	+				+1.5
2,001,761	+				+0.6
2,001,769	+				+0.8
2,001,769	+				+1.8
2,001,769	+				-2.2
2,001,769	+				+0.1
2,001,769	+				-3.1
2,001,769	+				-0.9
2,001,770	-				+0.1
2,001,770	-				+0.6
2,001,770	-				+1.0
2,001,770	-				-1.4
2,001,770	-				+0.1
2,001,770	-				+0.4
2,001,773	+				+0.0
2,001,773	+				+1.1
2,001,773	+				+0.1
2,001,794	-				+0.8
2,001,841	+	bglA	MCAODC_10055	0.12	-2.6
2,001,842	-	bglA	MCAODC_10055	0.12	-1.5
2,001,865	+	bglA	MCAODC_10055	0.14	+0.3
2,001,865	+	bglA	MCAODC_10055	0.14	+0.2
2,001,865	+	bglA	MCAODC_10055	0.14	+0.4
2,001,865	+	bglA	MCAODC_10055	0.14	+0.6
2,001,865	+	bglA	MCAODC_10055	0.14	+0.4
2,001,866	-	bglA	MCAODC_10055	0.14	-3.5
2,001,870	+	bglA	MCAODC_10055	0.14	-2.5
2,001,871	-	bglA	MCAODC_10055	0.14	-0.6
2,001,908	-	bglA	MCAODC_10055	0.17	+0.6
2,001,908	-	bglA	MCAODC_10055	0.17	-0.9
2,001,919	+	bglA	MCAODC_10055	0.18	-1.5
2,001,959	-	bglA	MCAODC_10055	0.20	+0.0
2,002,001	-	bglA	MCAODC_10055	0.23	+0.3
2,002,009	+	bglA	MCAODC_10055	0.24	+1.4
2,002,009	+	bglA	MCAODC_10055	0.24	+0.2
2,002,010	-	bglA	MCAODC_10055	0.24	-0.4
2,002,010	-	bglA	MCAODC_10055	0.24	-0.8
2,002,010	-	bglA	MCAODC_10055	0.24	+1.8
2,002,010	-	bglA	MCAODC_10055	0.24	+1.0
2,002,089	+	bglA	MCAODC_10055	0.29	+0.3
2,002,156	+	bglA	MCAODC_10055	0.34	-0.4
2,002,157	-	bglA	MCAODC_10055	0.34	+1.2
2,002,157	-	bglA	MCAODC_10055	0.34	-0.1
2,002,157	-	bglA	MCAODC_10055	0.34	-2.5
2,002,157	-	bglA	MCAODC_10055	0.34	+1.2
2,002,157	-	bglA	MCAODC_10055	0.34	-0.1
2,002,159	+	bglA	MCAODC_10055	0.34	+0.7
2,002,174	+	bglA	MCAODC_10055	0.35	+0.8
2,002,175	-	bglA	MCAODC_10055	0.35	-0.5
2,002,197	+	bglA	MCAODC_10055	0.37	+0.9
2,002,197	+	bglA	MCAODC_10055	0.37	+1.0
2,002,198	-	bglA	MCAODC_10055	0.37	-1.3
2,002,211	+	bglA	MCAODC_10055	0.38	+1.6
2,002,212	-	bglA	MCAODC_10055	0.38	+1.2
2,002,212	-	bglA	MCAODC_10055	0.38	-0.7
2,002,230	-	bglA	MCAODC_10055	0.39	-0.3
2,002,230	-	bglA	MCAODC_10055	0.39	+0.1
2,002,230	-	bglA	MCAODC_10055	0.39	-0.1
2,002,261	+	bglA	MCAODC_10055	0.41	+0.1
2,002,262	-	bglA	MCAODC_10055	0.42	-0.3
2,002,262	-	bglA	MCAODC_10055	0.42	-2.2
2,002,298	-	bglA	MCAODC_10055	0.44	+0.8
2,002,357	+	bglA	MCAODC_10055	0.48	+1.2
2,002,357	+	bglA	MCAODC_10055	0.48	-0.6
2,002,358	-	bglA	MCAODC_10055	0.48	+0.1
2,002,358	-	bglA	MCAODC_10055	0.48	-0.1
2,002,363	+	bglA	MCAODC_10055	0.49	-0.2
2,002,363	+	bglA	MCAODC_10055	0.49	+0.2
2,002,364	-	bglA	MCAODC_10055	0.49	+0.7
2,002,385	+	bglA	MCAODC_10055	0.50	+0.1
2,002,385	+	bglA	MCAODC_10055	0.50	-0.7
2,002,385	+	bglA	MCAODC_10055	0.50	+0.3
2,002,385	+	bglA	MCAODC_10055	0.50	+1.2
2,002,386	-	bglA	MCAODC_10055	0.50	+0.6
2,002,472	-	bglA	MCAODC_10055	0.56	-0.0
2,002,472	-	bglA	MCAODC_10055	0.56	+0.4
2,002,472	-	bglA	MCAODC_10055	0.56	-0.9