Strain Fitness in Escherichia coli ECRC101 around MCAODC_08870

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
1,769,739	+	garD	MCAODC_08865	0.60	-0.3
1,769,739	+	garD	MCAODC_08865	0.60	+1.2
1,769,740	-	garD	MCAODC_08865	0.60	+1.8
1,769,740	-	garD	MCAODC_08865	0.60	-0.8
1,769,740	-	garD	MCAODC_08865	0.60	+0.2
1,769,740	-	garD	MCAODC_08865	0.60	-0.3
1,769,757	-	garD	MCAODC_08865	0.61	+0.0
1,769,771	+	garD	MCAODC_08865	0.62	-1.4
1,769,771	+	garD	MCAODC_08865	0.62	+0.2
1,769,772	-	garD	MCAODC_08865	0.62	-0.7
1,769,772	-	garD	MCAODC_08865	0.62	+0.7
1,769,789	+	garD	MCAODC_08865	0.63	-0.4
1,769,790	-	garD	MCAODC_08865	0.64	+0.0
1,769,793	+	garD	MCAODC_08865	0.64	+1.6
1,769,793	+	garD	MCAODC_08865	0.64	-0.3
1,769,793	+	garD	MCAODC_08865	0.64	+0.0
1,769,794	-	garD	MCAODC_08865	0.64	+0.6
1,769,794	-	garD	MCAODC_08865	0.64	+0.4
1,769,833	+	garD	MCAODC_08865	0.66	+0.7
1,769,907	+	garD	MCAODC_08865	0.71	+0.2
1,769,907	+	garD	MCAODC_08865	0.71	+0.3
1,769,907	+	garD	MCAODC_08865	0.71	-1.5
1,769,907	+	garD	MCAODC_08865	0.71	-0.3
1,769,908	-	garD	MCAODC_08865	0.71	+0.1
1,769,908	-	garD	MCAODC_08865	0.71	-0.7
1,769,911	+	garD	MCAODC_08865	0.71	-0.1
1,769,911	+	garD	MCAODC_08865	0.71	+0.6
1,769,911	+	garD	MCAODC_08865	0.71	-1.1
1,769,912	-	garD	MCAODC_08865	0.71	+1.5
1,769,912	-	garD	MCAODC_08865	0.71	-1.2
1,769,912	-	garD	MCAODC_08865	0.71	+1.5
1,769,912	-	garD	MCAODC_08865	0.71	-2.3
1,770,010	+	garD	MCAODC_08865	0.78	+0.0
1,770,011	-	garD	MCAODC_08865	0.78	-0.3
1,770,011	-	garD	MCAODC_08865	0.78	-0.8
1,770,066	+	garD	MCAODC_08865	0.81	+0.8
1,770,067	-	garD	MCAODC_08865	0.81	+0.6
1,770,088	-	garD	MCAODC_08865	0.83	+1.2
1,770,088	-	garD	MCAODC_08865	0.83	-3.0
1,770,088	-	garD	MCAODC_08865	0.83	+0.0
1,770,204	-	garD	MCAODC_08865	0.90	+0.6
1,770,204	-	garD	MCAODC_08865	0.90	-0.5
1,770,219	-				-0.1
1,770,284	+				+1.5
1,770,284	+				-0.9
1,770,296	+				-2.5
1,770,519	+				+1.5
1,770,520	-				+0.6
1,770,539	+				+1.3
1,770,552	+				+0.1
1,770,633	+				-0.3
1,770,680	+				+1.4
1,770,685	-				+1.1
1,770,851	-				+1.0
1,770,885	+	garP	MCAODC_08870	0.11	-0.4
1,770,906	-	garP	MCAODC_08870	0.13	+0.6
1,770,933	-	garP	MCAODC_08870	0.15	+0.4
1,770,933	-	garP	MCAODC_08870	0.15	+0.3
1,770,998	+	garP	MCAODC_08870	0.20	+1.3
1,770,999	-	garP	MCAODC_08870	0.20	-0.2
1,770,999	-	garP	MCAODC_08870	0.20	+1.3
1,771,021	-	garP	MCAODC_08870	0.21	+0.2
1,771,021	-	garP	MCAODC_08870	0.21	+1.6
1,771,048	+	garP	MCAODC_08870	0.23	-1.0
1,771,048	+	garP	MCAODC_08870	0.23	+0.3
1,771,097	-	garP	MCAODC_08870	0.27	+0.5
1,771,178	-	garP	MCAODC_08870	0.33	+1.8
1,771,178	-	garP	MCAODC_08870	0.33	+0.8
1,771,196	-	garP	MCAODC_08870	0.34	-0.6
1,771,208	+	garP	MCAODC_08870	0.35	-0.1
1,771,336	+	garP	MCAODC_08870	0.45	-0.0
1,771,357	+	garP	MCAODC_08870	0.46	-0.9
1,771,357	+	garP	MCAODC_08870	0.46	+0.3
1,771,357	+	garP	MCAODC_08870	0.46	+0.5
1,771,357	+	garP	MCAODC_08870	0.46	+0.3
1,771,357	+	garP	MCAODC_08870	0.46	-0.0
1,771,357	+	garP	MCAODC_08870	0.46	-1.4
1,771,357	+	garP	MCAODC_08870	0.46	-0.5
1,771,357	+	garP	MCAODC_08870	0.46	-1.0
1,771,357	+	garP	MCAODC_08870	0.46	-0.4
1,771,357	+	garP	MCAODC_08870	0.46	+1.3
1,771,357	+	garP	MCAODC_08870	0.46	-0.2
1,771,358	-	garP	MCAODC_08870	0.47	+0.5
1,771,358	-	garP	MCAODC_08870	0.47	-0.1
1,771,358	-	garP	MCAODC_08870	0.47	+0.3
1,771,358	-	garP	MCAODC_08870	0.47	+0.1
1,771,358	-	garP	MCAODC_08870	0.47	+1.4
1,771,358	-	garP	MCAODC_08870	0.47	-0.3
1,771,382	-	garP	MCAODC_08870	0.48	-0.9
1,771,460	+	garP	MCAODC_08870	0.54	-0.6
1,771,460	+	garP	MCAODC_08870	0.54	+0.0
1,771,460	+	garP	MCAODC_08870	0.54	+0.1
1,771,460	+	garP	MCAODC_08870	0.54	-2.2
1,771,461	-	garP	MCAODC_08870	0.54	-1.4
1,771,461	-	garP	MCAODC_08870	0.54	-0.2
1,771,515	-	garP	MCAODC_08870	0.58	-1.0
1,771,563	-	garP	MCAODC_08870	0.62	-0.9
1,771,563	-	garP	MCAODC_08870	0.62	+0.3
1,771,671	-	garP	MCAODC_08870	0.70	+0.0
1,771,690	-	garP	MCAODC_08870	0.71	-0.6
1,771,708	+	garP	MCAODC_08870	0.73	-0.3
1,771,708	+	garP	MCAODC_08870	0.73	+0.7
1,771,708	+	garP	MCAODC_08870	0.73	+0.6
1,771,708	+	garP	MCAODC_08870	0.73	+0.3
1,771,709	-	garP	MCAODC_08870	0.73	-0.1
1,771,709	-	garP	MCAODC_08870	0.73	+0.8
1,771,709	-	garP	MCAODC_08870	0.73	-0.0
1,771,709	-	garP	MCAODC_08870	0.73	+1.3
1,771,755	+	garP	MCAODC_08870	0.76	+1.2
1,771,755	+	garP	MCAODC_08870	0.76	+0.0
1,771,755	+	garP	MCAODC_08870	0.76	-0.9
1,771,755	+	garP	MCAODC_08870	0.76	-0.2
1,771,756	-	garP	MCAODC_08870	0.76	+1.0
1,771,756	-	garP	MCAODC_08870	0.76	-0.0
1,771,759	+	garP	MCAODC_08870	0.77	+1.2
1,771,760	-	garP	MCAODC_08870	0.77	+0.2
1,771,760	-	garP	MCAODC_08870	0.77	-0.7
1,771,760	-	garP	MCAODC_08870	0.77	+0.4
1,771,760	-	garP	MCAODC_08870	0.77	-0.3
1,771,763	+	garP	MCAODC_08870	0.77	-0.7
1,771,763	+	garP	MCAODC_08870	0.77	-0.1
1,771,764	-	garP	MCAODC_08870	0.77	-1.8
1,771,764	-	garP	MCAODC_08870	0.77	-0.6
1,771,817	-	garP	MCAODC_08870	0.81	-0.4
1,771,898	-	garP	MCAODC_08870	0.87	-0.2
1,771,954	-				-0.7
1,771,954	-				-0.1
1,772,024	+				-0.5
1,772,024	+				-0.8
1,772,025	-				-0.3
1,772,034	+				+0.6
1,772,034	+				-0.2
1,772,034	+				+0.3
1,772,034	+				-0.0
1,772,048	-				-1.2
1,772,048	-				-0.1
1,772,054	-				+0.1
1,772,054	-				+0.4
1,772,054	-				-2.1
1,772,069	+				+0.4
1,772,069	+				-1.9
1,772,070	-				-3.0
1,772,079	+				+1.0
1,772,079	+				+1.3
1,772,080	-				+0.4
1,772,080	-				-0.7
1,772,080	-				-1.2
1,772,080	-				-0.8
1,772,082	-				-0.8
1,772,179	+	garL	MCAODC_08875	0.12	+0.6
1,772,248	+	garL	MCAODC_08875	0.21	+1.1
1,772,271	+	garL	MCAODC_08875	0.24	-0.1
1,772,271	+	garL	MCAODC_08875	0.24	+0.2
1,772,271	+	garL	MCAODC_08875	0.24	+0.6
1,772,272	-	garL	MCAODC_08875	0.24	-1.1
1,772,272	-	garL	MCAODC_08875	0.24	-0.2
1,772,272	-	garL	MCAODC_08875	0.24	+0.9
1,772,272	-	garL	MCAODC_08875	0.24	+0.8
1,772,339	-	garL	MCAODC_08875	0.33	+0.3
1,772,476	+	garL	MCAODC_08875	0.50	+0.0
1,772,476	+	garL	MCAODC_08875	0.50	-0.1
1,772,477	-	garL	MCAODC_08875	0.51	+0.1
1,772,477	-	garL	MCAODC_08875	0.51	-2.8
1,772,477	-	garL	MCAODC_08875	0.51	-1.4
1,772,528	-	garL	MCAODC_08875	0.57	-1.5
1,772,528	-	garL	MCAODC_08875	0.57	-0.6
1,772,528	-	garL	MCAODC_08875	0.57	-0.0
1,772,528	-	garL	MCAODC_08875	0.57	-0.0
1,772,542	-	garL	MCAODC_08875	0.59	-0.0
1,772,559	+	garL	MCAODC_08875	0.61	-0.5
1,772,560	-	garL	MCAODC_08875	0.61	+0.4
1,772,560	-	garL	MCAODC_08875	0.61	-1.2
1,772,560	-	garL	MCAODC_08875	0.61	+1.0
1,772,564	-	garL	MCAODC_08875	0.62	-3.6
1,772,576	-	garL	MCAODC_08875	0.63	-0.1
1,772,595	+	garL	MCAODC_08875	0.66	+1.8
1,772,637	+	garL	MCAODC_08875	0.71	+2.2
1,772,638	-	garL	MCAODC_08875	0.71	-0.7
1,772,670	+	garL	MCAODC_08875	0.76	+0.3
1,772,671	-	garL	MCAODC_08875	0.76	+1.0
1,772,696	-	garL	MCAODC_08875	0.79	-1.2
1,772,763	-	garL	MCAODC_08875	0.88	+0.2
1,772,887	-				+1.8
1,772,907	+				-2.6
1,772,907	+				+1.3
1,772,941	-				-0.1
1,772,997	+	garR	MCAODC_08880	0.12	-0.6
1,772,998	-	garR	MCAODC_08880	0.12	+0.5
1,772,998	-	garR	MCAODC_08880	0.12	+0.5
1,773,036	+	garR	MCAODC_08880	0.17	+0.0
1,773,036	+	garR	MCAODC_08880	0.17	+0.2
1,773,036	+	garR	MCAODC_08880	0.17	+0.4
1,773,037	-	garR	MCAODC_08880	0.17	-0.2