Strain Fitness in Escherichia coli ECRC101 around MCAODC_00395

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
57,402	+	tssF	MCAODC_00390	0.50	+1.1
57,407	+	tssF	MCAODC_00390	0.50	+0.5
57,412	-	tssF	MCAODC_00390	0.51	-2.6
57,458	-	tssF	MCAODC_00390	0.53	+0.7
57,458	-	tssF	MCAODC_00390	0.53	-0.1
57,500	+	tssF	MCAODC_00390	0.55	-0.9
57,500	+	tssF	MCAODC_00390	0.55	-0.2
57,537	+	tssF	MCAODC_00390	0.57	+0.6
57,629	-	tssF	MCAODC_00390	0.62	+0.4
57,629	-	tssF	MCAODC_00390	0.62	+0.9
57,652	+	tssF	MCAODC_00390	0.64	+0.7
57,652	+	tssF	MCAODC_00390	0.64	-0.9
57,652	+	tssF	MCAODC_00390	0.64	-2.6
57,653	-	tssF	MCAODC_00390	0.64	+0.2
57,703	-	tssF	MCAODC_00390	0.66	-1.2
57,714	+	tssF	MCAODC_00390	0.67	+0.1
57,716	+	tssF	MCAODC_00390	0.67	+0.7
57,716	+	tssF	MCAODC_00390	0.67	+1.1
57,716	+	tssF	MCAODC_00390	0.67	+1.8
57,716	+	tssF	MCAODC_00390	0.67	+0.8
57,716	+	tssF	MCAODC_00390	0.67	+0.2
57,716	+	tssF	MCAODC_00390	0.67	+0.1
57,716	+	tssF	MCAODC_00390	0.67	-0.8
57,716	+	tssF	MCAODC_00390	0.67	+1.0
57,717	-	tssF	MCAODC_00390	0.67	+0.2
57,717	-	tssF	MCAODC_00390	0.67	+2.3
57,717	-	tssF	MCAODC_00390	0.67	+0.4
57,717	-	tssF	MCAODC_00390	0.67	+1.7
57,717	-	tssF	MCAODC_00390	0.67	+0.3
57,717	-	tssF	MCAODC_00390	0.67	-1.1
57,717	-	tssF	MCAODC_00390	0.67	+1.6
57,717	-	tssF	MCAODC_00390	0.67	-2.2
57,789	+	tssF	MCAODC_00390	0.71	-0.2
57,790	-	tssF	MCAODC_00390	0.71	-0.3
57,790	-	tssF	MCAODC_00390	0.71	-0.0
57,958	+	tssF	MCAODC_00390	0.80	-2.5
58,144	+				-0.1
58,145	-				+0.8
58,145	-				-1.0
58,183	+				-3.1
58,184	-				-0.0
58,317	+				-0.8
58,317	+				-1.3
58,317	+				-2.2
58,383	-				+0.4
58,395	+				+0.5
58,462	+	tssG	MCAODC_00395	0.16	+0.2
58,630	-	tssG	MCAODC_00395	0.32	+1.4
58,632	+	tssG	MCAODC_00395	0.32	-1.1
58,632	+	tssG	MCAODC_00395	0.32	+0.1
58,632	+	tssG	MCAODC_00395	0.32	-0.2
58,633	-	tssG	MCAODC_00395	0.32	+0.6
58,633	-	tssG	MCAODC_00395	0.32	+1.4
58,633	-	tssG	MCAODC_00395	0.32	+0.4
58,739	+	tssG	MCAODC_00395	0.42	-0.8
58,740	-	tssG	MCAODC_00395	0.42	+1.1
58,743	+	tssG	MCAODC_00395	0.42	+0.3
58,749	+	tssG	MCAODC_00395	0.43	+1.1
58,800	+	tssG	MCAODC_00395	0.47	-1.1
58,801	-	tssG	MCAODC_00395	0.47	+0.4
58,850	+	tssG	MCAODC_00395	0.52	+0.7
58,872	+	tssG	MCAODC_00395	0.54	-4.0
59,022	+	tssG	MCAODC_00395	0.68	-0.2
59,022	+	tssG	MCAODC_00395	0.68	+0.3
59,022	+	tssG	MCAODC_00395	0.68	-1.2
59,023	-	tssG	MCAODC_00395	0.68	+0.3
59,023	-	tssG	MCAODC_00395	0.68	+0.5
59,123	+	tssG	MCAODC_00395	0.77	-0.7
59,124	-	tssG	MCAODC_00395	0.77	-0.5
59,236	+	tssG	MCAODC_00395	0.88	+1.1
59,236	+	tssG	MCAODC_00395	0.88	+0.8
59,237	-	tssG	MCAODC_00395	0.88	+0.3
59,237	-	tssG	MCAODC_00395	0.88	+0.7
59,237	-	tssG	MCAODC_00395	0.88	-2.6
59,237	-	tssG	MCAODC_00395	0.88	-0.1
59,360	-				-0.3
59,360	-				+0.4
59,368	-				+0.5
59,368	-				+0.9
59,394	-				+1.3
59,410	+				-0.3
59,528	-	fha	MCAODC_00400	0.10	+0.2
59,659	+	fha	MCAODC_00400	0.21	-0.2
59,659	+	fha	MCAODC_00400	0.21	+0.4
59,659	+	fha	MCAODC_00400	0.21	+0.5
59,659	+	fha	MCAODC_00400	0.21	-0.4
59,660	-	fha	MCAODC_00400	0.21	-0.0
59,730	-	fha	MCAODC_00400	0.26	+0.5
59,740	-	fha	MCAODC_00400	0.27	+0.4
59,787	-	fha	MCAODC_00400	0.31	+1.0
59,806	+	fha	MCAODC_00400	0.32	-0.9
59,807	-	fha	MCAODC_00400	0.32	-0.2
59,925	-	fha	MCAODC_00400	0.41	+1.1
59,925	-	fha	MCAODC_00400	0.41	+1.6
59,993	+	fha	MCAODC_00400	0.47	+0.3
59,994	-	fha	MCAODC_00400	0.47	-0.3
59,994	-	fha	MCAODC_00400	0.47	-1.1
59,994	-	fha	MCAODC_00400	0.47	-0.4
60,036	+	fha	MCAODC_00400	0.50	+0.3
60,036	+	fha	MCAODC_00400	0.50	-0.2
60,056	+	fha	MCAODC_00400	0.52	+0.2
60,056	+	fha	MCAODC_00400	0.52	-0.1
60,056	+	fha	MCAODC_00400	0.52	-0.9
60,056	+	fha	MCAODC_00400	0.52	+1.1
60,057	-	fha	MCAODC_00400	0.52	+1.4
60,057	-	fha	MCAODC_00400	0.52	-0.1
60,206	-	fha	MCAODC_00400	0.63	-0.8
60,301	-	fha	MCAODC_00400	0.71	+0.2
60,336	-	fha	MCAODC_00400	0.74	+0.2
60,347	-	fha	MCAODC_00400	0.74	-0.2