Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-6
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_02055 and OLJFJH_02060 are separated by 375 nucleotides OLJFJH_02060 and OLJFJH_02065 are separated by 120 nucleotides OLJFJH_02065 and OLJFJH_02070 are separated by 175 nucleotides OLJFJH_02070 and OLJFJH_02075 are separated by 75 nucleotides
OLJFJH_02055: OLJFJH_02055 - Levan regulatory protein RlsC similar to phage-related protein, at 363,394 to 363,585
_02055
OLJFJH_02060: OLJFJH_02060 - hypothetical protein, at 363,961 to 364,074
_02060
OLJFJH_02065: OLJFJH_02065 - hypothetical protein, at 364,195 to 364,521
_02065
OLJFJH_02070: OLJFJH_02070 - phage repressor protein, at 364,697 to 365,311
_02070
OLJFJH_02075: OLJFJH_02075 - arabinose 5-phosphate isomerase GutQ, at 365,387 to 366,352
_02075
Position (kb) 364
365 Strain fitness (log2 ratio) -2
-1
0
1 at 363.204 kb on - strand at 363.268 kb on - strand at 363.377 kb on - strand at 363.576 kb on - strand at 363.697 kb on + strand at 363.697 kb on + strand at 363.697 kb on + strand at 363.697 kb on + strand at 363.698 kb on - strand at 363.710 kb on - strand at 363.722 kb on + strand at 363.723 kb on - strand at 363.760 kb on - strand at 363.854 kb on - strand at 363.854 kb on - strand at 363.858 kb on - strand at 363.858 kb on - strand at 363.914 kb on - strand at 363.914 kb on - strand at 363.954 kb on - strand at 363.960 kb on - strand at 363.960 kb on - strand at 363.960 kb on - strand at 364.002 kb on - strand, within OLJFJH_02060 at 364.257 kb on + strand, within OLJFJH_02065 at 364.322 kb on + strand, within OLJFJH_02065 at 364.322 kb on + strand, within OLJFJH_02065 at 364.323 kb on - strand, within OLJFJH_02065 at 364.323 kb on - strand, within OLJFJH_02065 at 364.323 kb on - strand, within OLJFJH_02065 at 364.326 kb on + strand, within OLJFJH_02065 at 364.327 kb on - strand, within OLJFJH_02065 at 364.327 kb on - strand, within OLJFJH_02065 at 364.691 kb on + strand at 365.271 kb on + strand at 365.283 kb on + strand at 365.303 kb on - strand at 365.303 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-6 remove 363,204 - +0.2 363,268 - +0.0 363,377 - +0.1 363,576 - -0.2 363,697 + -0.5 363,697 + -2.1 363,697 + -0.4 363,697 + -0.7 363,698 - -1.3 363,710 - -0.5 363,722 + +1.2 363,723 - -0.3 363,760 - +0.9 363,854 - +0.0 363,854 - -1.7 363,858 - +1.2 363,858 - -0.0 363,914 - +0.1 363,914 - -0.0 363,954 - -0.9 363,960 - -2.0 363,960 - +0.4 363,960 - -0.2 364,002 - OLJFJH_02060 0.36 -1.0 364,257 + OLJFJH_02065 0.19 -1.3 364,322 + OLJFJH_02065 0.39 +0.1 364,322 + OLJFJH_02065 0.39 +0.3 364,323 - OLJFJH_02065 0.39 -0.7 364,323 - OLJFJH_02065 0.39 +1.3 364,323 - OLJFJH_02065 0.39 -0.5 364,326 + OLJFJH_02065 0.40 -0.7 364,327 - OLJFJH_02065 0.40 -0.7 364,327 - OLJFJH_02065 0.40 +0.3 364,691 + -0.4 365,271 + -1.3 365,283 + -0.6 365,303 - +0.5 365,303 - -0.6
Or see this region's nucleotide sequence