Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS07260 and A4249_RS07265 are separated by 108 nucleotides A4249_RS07265 and A4249_RS17075 are separated by 150 nucleotides A4249_RS17075 and A4249_RS07275 are separated by 14 nucleotides A4249_RS07275 and A4249_RS07280 are separated by 5 nucleotides
A4249_RS07260: A4249_RS07260 - aldo/keto reductase, at 1,454,143 to 1,455,129
_RS07260
A4249_RS07265: A4249_RS07265 - tRNA-His, at 1,455,238 to 1,455,314
_RS07265
A4249_RS17075: A4249_RS17075 - energy transducer TonB, at 1,455,465 to 1,456,184
_RS17075
A4249_RS07275: A4249_RS07275 - biopolymer transporter ExbD, at 1,456,199 to 1,456,633
_RS07275
A4249_RS07280: A4249_RS07280 - MotA/TolQ/ExbB proton channel family protein, at 1,456,639 to 1,457,520
_RS07280
Position (kb)
1455
1456
1457 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1454.526 kb on - strand, within A4249_RS07260 at 1454.600 kb on + strand, within A4249_RS07260 at 1454.600 kb on + strand, within A4249_RS07260 at 1454.601 kb on - strand, within A4249_RS07260 at 1454.601 kb on - strand, within A4249_RS07260 at 1454.601 kb on - strand, within A4249_RS07260 at 1454.765 kb on + strand, within A4249_RS07260 at 1454.766 kb on - strand, within A4249_RS07260 at 1454.766 kb on - strand, within A4249_RS07260 at 1454.766 kb on - strand, within A4249_RS07260 at 1454.766 kb on - strand, within A4249_RS07260 at 1454.766 kb on - strand, within A4249_RS07260 at 1454.766 kb on - strand, within A4249_RS07260 at 1454.766 kb on - strand, within A4249_RS07260 at 1454.766 kb on - strand, within A4249_RS07260 at 1454.768 kb on + strand, within A4249_RS07260 at 1454.768 kb on + strand, within A4249_RS07260 at 1454.768 kb on + strand, within A4249_RS07260 at 1454.768 kb on + strand, within A4249_RS07260 at 1454.768 kb on + strand, within A4249_RS07260 at 1454.769 kb on - strand, within A4249_RS07260 at 1454.769 kb on - strand, within A4249_RS07260 at 1454.769 kb on - strand, within A4249_RS07260 at 1454.769 kb on - strand, within A4249_RS07260 at 1454.815 kb on - strand, within A4249_RS07260 at 1454.851 kb on - strand, within A4249_RS07260 at 1454.851 kb on - strand, within A4249_RS07260 at 1454.873 kb on + strand, within A4249_RS07260 at 1454.873 kb on + strand, within A4249_RS07260 at 1454.874 kb on - strand, within A4249_RS07260 at 1454.874 kb on - strand, within A4249_RS07260 at 1454.953 kb on - strand, within A4249_RS07260 at 1454.953 kb on - strand, within A4249_RS07260 at 1454.953 kb on - strand, within A4249_RS07260 at 1454.953 kb on - strand, within A4249_RS07260 at 1454.964 kb on - strand, within A4249_RS07260 at 1454.964 kb on - strand, within A4249_RS07260 at 1455.051 kb on - strand at 1455.051 kb on - strand at 1455.051 kb on - strand at 1455.170 kb on - strand at 1455.172 kb on - strand at 1455.172 kb on - strand at 1455.172 kb on - strand at 1455.172 kb on - strand at 1455.172 kb on - strand at 1455.376 kb on + strand at 1455.376 kb on + strand at 1455.376 kb on + strand at 1455.377 kb on - strand at 1455.377 kb on - strand at 1455.800 kb on + strand, within A4249_RS17075 at 1455.820 kb on + strand, within A4249_RS17075 at 1455.820 kb on + strand, within A4249_RS17075 at 1455.821 kb on - strand, within A4249_RS17075 at 1456.015 kb on + strand, within A4249_RS17075 at 1456.016 kb on - strand, within A4249_RS17075 at 1456.115 kb on - strand at 1456.115 kb on - strand at 1456.168 kb on + strand at 1456.169 kb on - strand at 1456.169 kb on - strand at 1456.184 kb on + strand at 1456.184 kb on + strand at 1456.184 kb on + strand at 1456.184 kb on + strand at 1456.184 kb on + strand at 1456.184 kb on + strand at 1456.184 kb on + strand at 1456.184 kb on + strand at 1456.185 kb on - strand at 1456.185 kb on - strand at 1456.185 kb on - strand at 1456.185 kb on - strand at 1456.185 kb on - strand at 1456.185 kb on - strand at 1456.185 kb on - strand at 1456.185 kb on - strand at 1456.185 kb on - strand at 1456.187 kb on + strand at 1456.187 kb on + strand at 1456.188 kb on - strand at 1456.188 kb on - strand at 1456.188 kb on - strand at 1456.188 kb on - strand at 1456.188 kb on - strand at 1456.188 kb on - strand at 1456.200 kb on + strand at 1456.200 kb on + strand at 1456.200 kb on + strand at 1456.200 kb on + strand at 1456.201 kb on - strand at 1456.201 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 1,454,526 - A4249_RS07260 0.39 +0.3 1,454,600 + A4249_RS07260 0.46 +0.1 1,454,600 + A4249_RS07260 0.46 -0.7 1,454,601 - A4249_RS07260 0.46 -0.4 1,454,601 - A4249_RS07260 0.46 -1.1 1,454,601 - A4249_RS07260 0.46 +0.3 1,454,765 + A4249_RS07260 0.63 -0.8 1,454,766 - A4249_RS07260 0.63 -1.0 1,454,766 - A4249_RS07260 0.63 -0.2 1,454,766 - A4249_RS07260 0.63 +0.0 1,454,766 - A4249_RS07260 0.63 +0.1 1,454,766 - A4249_RS07260 0.63 -0.4 1,454,766 - A4249_RS07260 0.63 +1.1 1,454,766 - A4249_RS07260 0.63 -0.0 1,454,766 - A4249_RS07260 0.63 -0.0 1,454,768 + A4249_RS07260 0.63 -2.6 1,454,768 + A4249_RS07260 0.63 -0.5 1,454,768 + A4249_RS07260 0.63 -0.4 1,454,768 + A4249_RS07260 0.63 -0.5 1,454,768 + A4249_RS07260 0.63 -0.3 1,454,769 - A4249_RS07260 0.63 +0.5 1,454,769 - A4249_RS07260 0.63 -0.1 1,454,769 - A4249_RS07260 0.63 +0.3 1,454,769 - A4249_RS07260 0.63 -1.4 1,454,815 - A4249_RS07260 0.68 +0.7 1,454,851 - A4249_RS07260 0.72 -0.2 1,454,851 - A4249_RS07260 0.72 +0.1 1,454,873 + A4249_RS07260 0.74 -1.4 1,454,873 + A4249_RS07260 0.74 -0.5 1,454,874 - A4249_RS07260 0.74 -0.1 1,454,874 - A4249_RS07260 0.74 -0.4 1,454,953 - A4249_RS07260 0.82 -0.5 1,454,953 - A4249_RS07260 0.82 -1.3 1,454,953 - A4249_RS07260 0.82 -0.7 1,454,953 - A4249_RS07260 0.82 -0.5 1,454,964 - A4249_RS07260 0.83 -0.2 1,454,964 - A4249_RS07260 0.83 +0.2 1,455,051 - -0.3 1,455,051 - +0.5 1,455,051 - -0.8 1,455,170 - -0.5 1,455,172 - -0.7 1,455,172 - -0.2 1,455,172 - -0.8 1,455,172 - +0.1 1,455,172 - +0.1 1,455,376 + -0.4 1,455,376 + +0.1 1,455,376 + -0.4 1,455,377 - +0.6 1,455,377 - -0.2 1,455,800 + A4249_RS17075 0.47 -0.5 1,455,820 + A4249_RS17075 0.49 +1.2 1,455,820 + A4249_RS17075 0.49 +0.4 1,455,821 - A4249_RS17075 0.49 +2.1 1,456,015 + A4249_RS17075 0.76 -0.1 1,456,016 - A4249_RS17075 0.77 +0.1 1,456,115 - +0.1 1,456,115 - -0.5 1,456,168 + -0.0 1,456,169 - -1.5 1,456,169 - -0.4 1,456,184 + -1.0 1,456,184 + +0.5 1,456,184 + +0.5 1,456,184 + -0.1 1,456,184 + +0.4 1,456,184 + +0.4 1,456,184 + -0.7 1,456,184 + -1.3 1,456,185 - +0.3 1,456,185 - -0.1 1,456,185 - +0.1 1,456,185 - -0.6 1,456,185 - +0.1 1,456,185 - -0.1 1,456,185 - -0.5 1,456,185 - -0.4 1,456,185 - -0.4 1,456,187 + +1.1 1,456,187 + +0.2 1,456,188 - -0.2 1,456,188 - -1.2 1,456,188 - +0.6 1,456,188 - -0.1 1,456,188 - -0.9 1,456,188 - -1.1 1,456,200 + +0.2 1,456,200 + -1.0 1,456,200 + +1.1 1,456,200 + -0.6 1,456,201 - -0.9 1,456,201 - -1.7
Or see this region's nucleotide sequence