Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS16725

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS03250 and A4249_RS16495 are separated by 45 nucleotidesA4249_RS16495 and A4249_RS16725 are separated by 158 nucleotidesA4249_RS16725 and A4249_RS03260 overlap by 38 nucleotides A4249_RS03250: A4249_RS03250 - TonB-dependent receptor, at 683,046 to 684,938 _RS03250 A4249_RS16495: A4249_RS16495 - hypothetical protein, at 684,984 to 685,178 _RS16495 A4249_RS16725: A4249_RS16725 - hypothetical protein, at 685,337 to 685,726 _RS16725 A4249_RS03260: A4249_RS03260 - acyltransferase, at 685,689 to 686,849 _RS03260 Position (kb) 685 686Strain fitness (log2 ratio) -2 -1 0 1 2at 684.373 kb on + strand, within A4249_RS03250at 684.373 kb on + strand, within A4249_RS03250at 684.373 kb on + strand, within A4249_RS03250at 684.373 kb on + strand, within A4249_RS03250at 684.373 kb on + strand, within A4249_RS03250at 684.373 kb on + strand, within A4249_RS03250at 684.374 kb on - strand, within A4249_RS03250at 684.374 kb on - strand, within A4249_RS03250at 684.374 kb on - strand, within A4249_RS03250at 684.374 kb on - strand, within A4249_RS03250at 684.374 kb on - strand, within A4249_RS03250at 684.532 kb on + strand, within A4249_RS03250at 684.532 kb on + strand, within A4249_RS03250at 684.532 kb on + strand, within A4249_RS03250at 684.532 kb on + strand, within A4249_RS03250at 684.532 kb on + strand, within A4249_RS03250at 684.532 kb on + strand, within A4249_RS03250at 684.532 kb on + strand, within A4249_RS03250at 684.532 kb on + strand, within A4249_RS03250at 684.532 kb on + strand, within A4249_RS03250at 684.532 kb on + strand, within A4249_RS03250at 684.532 kb on + strand, within A4249_RS03250at 684.533 kb on - strand, within A4249_RS03250at 684.533 kb on - strand, within A4249_RS03250at 684.533 kb on - strand, within A4249_RS03250at 684.533 kb on - strand, within A4249_RS03250at 684.533 kb on - strand, within A4249_RS03250at 684.533 kb on - strand, within A4249_RS03250at 684.533 kb on - strand, within A4249_RS03250at 684.533 kb on - strand, within A4249_RS03250at 684.533 kb on - strand, within A4249_RS03250at 684.533 kb on - strand, within A4249_RS03250at 684.536 kb on - strand, within A4249_RS03250at 684.536 kb on - strand, within A4249_RS03250at 684.536 kb on - strand, within A4249_RS03250at 684.715 kb on + strand, within A4249_RS03250at 684.715 kb on + strand, within A4249_RS03250at 684.715 kb on + strand, within A4249_RS03250at 684.715 kb on + strand, within A4249_RS03250at 684.715 kb on + strand, within A4249_RS03250at 684.715 kb on + strand, within A4249_RS03250at 684.716 kb on - strand, within A4249_RS03250at 684.716 kb on - strand, within A4249_RS03250at 684.716 kb on - strand, within A4249_RS03250at 684.716 kb on - strand, within A4249_RS03250at 684.716 kb on - strand, within A4249_RS03250at 684.716 kb on - strand, within A4249_RS03250at 684.716 kb on - strand, within A4249_RS03250at 684.716 kb on - strand, within A4249_RS03250at 684.716 kb on - strand, within A4249_RS03250at 684.716 kb on - strand, within A4249_RS03250at 684.716 kb on - strand, within A4249_RS03250at 684.808 kb on + strandat 684.808 kb on + strandat 684.808 kb on + strandat 684.808 kb on + strandat 684.809 kb on - strandat 684.865 kb on + strandat 684.866 kb on - strandat 684.953 kb on + strandat 684.985 kb on + strandat 684.985 kb on + strandat 684.986 kb on - strandat 685.346 kb on + strandat 685.346 kb on + strandat 685.346 kb on + strandat 685.346 kb on + strandat 685.346 kb on + strandat 685.346 kb on + strandat 685.346 kb on + strandat 685.346 kb on + strandat 685.346 kb on + strandat 685.347 kb on - strandat 685.347 kb on - strandat 685.347 kb on - strandat 685.364 kb on + strandat 685.364 kb on + strandat 685.364 kb on + strandat 685.365 kb on - strandat 685.365 kb on - strandat 685.365 kb on - strandat 685.365 kb on - strandat 685.365 kb on - strandat 685.365 kb on - strandat 685.399 kb on - strand, within A4249_RS16725at 685.399 kb on - strand, within A4249_RS16725at 685.399 kb on - strand, within A4249_RS16725at 685.773 kb on + strandat 685.945 kb on + strand, within A4249_RS03260at 685.945 kb on + strand, within A4249_RS03260at 685.945 kb on + strand, within A4249_RS03260at 685.946 kb on - strand, within A4249_RS03260at 685.946 kb on - strand, within A4249_RS03260at 685.946 kb on - strand, within A4249_RS03260at 685.946 kb on - strand, within A4249_RS03260at 685.946 kb on - strand, within A4249_RS03260at 685.946 kb on - strand, within A4249_RS03260at 685.946 kb on - strand, within A4249_RS03260at 685.946 kb on - strand, within A4249_RS03260at 686.173 kb on + strand, within A4249_RS03260at 686.173 kb on + strand, within A4249_RS03260at 686.173 kb on + strand, within A4249_RS03260at 686.174 kb on - strand, within A4249_RS03260at 686.174 kb on - strand, within A4249_RS03260at 686.174 kb on - strand, within A4249_RS03260at 686.266 kb on + strand, within A4249_RS03260at 686.266 kb on + strand, within A4249_RS03260at 686.266 kb on + strand, within A4249_RS03260at 686.266 kb on + strand, within A4249_RS03260at 686.266 kb on + strand, within A4249_RS03260at 686.267 kb on - strand, within A4249_RS03260at 686.267 kb on - strand, within A4249_RS03260at 686.267 kb on - strand, within A4249_RS03260at 686.267 kb on - strand, within A4249_RS03260at 686.371 kb on + strand, within A4249_RS03260at 686.371 kb on + strand, within A4249_RS03260at 686.372 kb on - strand, within A4249_RS03260at 686.372 kb on - strand, within A4249_RS03260at 686.372 kb on - strand, within A4249_RS03260at 686.641 kb on + strand, within A4249_RS03260at 686.641 kb on + strand, within A4249_RS03260at 686.641 kb on + strand, within A4249_RS03260at 686.642 kb on - strand, within A4249_RS03260at 686.642 kb on - strand, within A4249_RS03260at 686.642 kb on - strand, within A4249_RS03260at 686.642 kb on - strand, within A4249_RS03260

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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684,373 + A4249_RS03250 0.70 +0.2
684,373 + A4249_RS03250 0.70 -1.0
684,373 + A4249_RS03250 0.70 +1.4
684,373 + A4249_RS03250 0.70 -1.4
684,373 + A4249_RS03250 0.70 +0.5
684,373 + A4249_RS03250 0.70 -0.5
684,374 - A4249_RS03250 0.70 +0.1
684,374 - A4249_RS03250 0.70 -0.2
684,374 - A4249_RS03250 0.70 +1.1
684,374 - A4249_RS03250 0.70 -0.4
684,374 - A4249_RS03250 0.70 -0.2
684,532 + A4249_RS03250 0.78 +0.7
684,532 + A4249_RS03250 0.78 +1.3
684,532 + A4249_RS03250 0.78 +0.9
684,532 + A4249_RS03250 0.78 -0.5
684,532 + A4249_RS03250 0.78 +0.0
684,532 + A4249_RS03250 0.78 -0.4
684,532 + A4249_RS03250 0.78 -1.3
684,532 + A4249_RS03250 0.78 -1.0
684,532 + A4249_RS03250 0.78 -0.6
684,532 + A4249_RS03250 0.78 +1.1
684,532 + A4249_RS03250 0.78 -0.0
684,533 - A4249_RS03250 0.79 +0.7
684,533 - A4249_RS03250 0.79 -0.3
684,533 - A4249_RS03250 0.79 +0.4
684,533 - A4249_RS03250 0.79 -0.7
684,533 - A4249_RS03250 0.79 -1.6
684,533 - A4249_RS03250 0.79 -1.0
684,533 - A4249_RS03250 0.79 +1.3
684,533 - A4249_RS03250 0.79 +1.0
684,533 - A4249_RS03250 0.79 +0.9
684,533 - A4249_RS03250 0.79 -0.1
684,536 - A4249_RS03250 0.79 +0.1
684,536 - A4249_RS03250 0.79 +1.0
684,536 - A4249_RS03250 0.79 +0.0
684,715 + A4249_RS03250 0.88 +1.2
684,715 + A4249_RS03250 0.88 +0.4
684,715 + A4249_RS03250 0.88 -0.0
684,715 + A4249_RS03250 0.88 +0.8
684,715 + A4249_RS03250 0.88 +0.4
684,715 + A4249_RS03250 0.88 -0.1
684,716 - A4249_RS03250 0.88 -0.0
684,716 - A4249_RS03250 0.88 -0.4
684,716 - A4249_RS03250 0.88 -0.7
684,716 - A4249_RS03250 0.88 +0.3
684,716 - A4249_RS03250 0.88 -0.9
684,716 - A4249_RS03250 0.88 +0.8
684,716 - A4249_RS03250 0.88 +0.7
684,716 - A4249_RS03250 0.88 -0.6
684,716 - A4249_RS03250 0.88 -0.9
684,716 - A4249_RS03250 0.88 +0.7
684,716 - A4249_RS03250 0.88 +0.3
684,808 + +0.1
684,808 + +0.2
684,808 + +1.1
684,808 + -0.8
684,809 - +0.6
684,865 + -0.2
684,866 - -0.5
684,953 + +1.8
684,985 + +0.2
684,985 + +1.0
684,986 - -0.2
685,346 + -0.2
685,346 + +0.3
685,346 + +0.2
685,346 + +0.4
685,346 + -0.7
685,346 + +0.1
685,346 + -0.1
685,346 + -0.3
685,346 + -0.4
685,347 - -0.8
685,347 - +0.9
685,347 - -0.1
685,364 + +0.2
685,364 + +0.7
685,364 + -1.0
685,365 - -0.1
685,365 - -2.1
685,365 - +0.3
685,365 - +0.1
685,365 - +1.5
685,365 - -1.9
685,399 - A4249_RS16725 0.16 +0.4
685,399 - A4249_RS16725 0.16 -0.8
685,399 - A4249_RS16725 0.16 -2.7
685,773 + -0.9
685,945 + A4249_RS03260 0.22 +2.7
685,945 + A4249_RS03260 0.22 +0.8
685,945 + A4249_RS03260 0.22 -1.6
685,946 - A4249_RS03260 0.22 -0.5
685,946 - A4249_RS03260 0.22 +0.2
685,946 - A4249_RS03260 0.22 -0.8
685,946 - A4249_RS03260 0.22 -0.5
685,946 - A4249_RS03260 0.22 -1.0
685,946 - A4249_RS03260 0.22 +0.0
685,946 - A4249_RS03260 0.22 -0.0
685,946 - A4249_RS03260 0.22 -1.3
686,173 + A4249_RS03260 0.42 -0.9
686,173 + A4249_RS03260 0.42 +0.9
686,173 + A4249_RS03260 0.42 -0.1
686,174 - A4249_RS03260 0.42 +0.2
686,174 - A4249_RS03260 0.42 -0.1
686,174 - A4249_RS03260 0.42 -0.4
686,266 + A4249_RS03260 0.50 -0.4
686,266 + A4249_RS03260 0.50 -0.2
686,266 + A4249_RS03260 0.50 +0.1
686,266 + A4249_RS03260 0.50 +0.5
686,266 + A4249_RS03260 0.50 -0.6
686,267 - A4249_RS03260 0.50 +0.5
686,267 - A4249_RS03260 0.50 +0.5
686,267 - A4249_RS03260 0.50 +0.0
686,267 - A4249_RS03260 0.50 +0.5
686,371 + A4249_RS03260 0.59 +0.9
686,371 + A4249_RS03260 0.59 -0.9
686,372 - A4249_RS03260 0.59 -1.0
686,372 - A4249_RS03260 0.59 -0.7
686,372 - A4249_RS03260 0.59 -0.9
686,641 + A4249_RS03260 0.82 +1.2
686,641 + A4249_RS03260 0.82 +0.0
686,641 + A4249_RS03260 0.82 +0.1
686,642 - A4249_RS03260 0.82 -1.3
686,642 - A4249_RS03260 0.82 +0.7
686,642 - A4249_RS03260 0.82 -0.1
686,642 - A4249_RS03260 0.82 -0.7

Or see this region's nucleotide sequence