Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS15925

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS15920 and A4249_RS15925 are separated by 140 nucleotidesA4249_RS15925 and A4249_RS15930 are separated by 127 nucleotides A4249_RS15920: A4249_RS15920 - Tol-Pal system beta propeller repeat protein TolB, at 3,211,394 to 3,212,758 _RS15920 A4249_RS15925: A4249_RS15925 - peptidoglycan-associated lipoprotein Pal, at 3,212,899 to 3,213,462 _RS15925 A4249_RS15930: A4249_RS15930 - DUF3667 domain-containing protein, at 3,213,590 to 3,214,732 _RS15930 Position (kb) 3212 3213 3214Strain fitness (log2 ratio) -1 0 1at 3212.756 kb on + strandat 3212.756 kb on + strandat 3212.785 kb on + strandat 3212.785 kb on + strandat 3212.786 kb on - strandat 3212.812 kb on + strandat 3212.843 kb on - strandat 3212.880 kb on + strandat 3212.880 kb on + strandat 3212.880 kb on + strandat 3213.593 kb on + strandat 3214.355 kb on + strand, within A4249_RS15930at 3214.356 kb on - strand, within A4249_RS15930at 3214.356 kb on - strand, within A4249_RS15930at 3214.357 kb on + strand, within A4249_RS15930at 3214.357 kb on + strand, within A4249_RS15930at 3214.357 kb on + strand, within A4249_RS15930at 3214.357 kb on + strand, within A4249_RS15930at 3214.358 kb on - strand, within A4249_RS15930at 3214.358 kb on - strand, within A4249_RS15930at 3214.358 kb on - strand, within A4249_RS15930at 3214.358 kb on - strand, within A4249_RS15930at 3214.358 kb on - strand, within A4249_RS15930at 3214.376 kb on + strand, within A4249_RS15930at 3214.376 kb on + strand, within A4249_RS15930at 3214.376 kb on + strand, within A4249_RS15930at 3214.376 kb on + strand, within A4249_RS15930at 3214.377 kb on - strand, within A4249_RS15930at 3214.377 kb on - strand, within A4249_RS15930at 3214.377 kb on - strand, within A4249_RS15930at 3214.457 kb on + strand, within A4249_RS15930at 3214.457 kb on + strand, within A4249_RS15930at 3214.458 kb on - strand, within A4249_RS15930

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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3,212,756 + -0.4
3,212,756 + -0.4
3,212,785 + +0.4
3,212,785 + -0.1
3,212,786 - -0.6
3,212,812 + -1.0
3,212,843 - -0.2
3,212,880 + -1.6
3,212,880 + +1.2
3,212,880 + -0.3
3,213,593 + -0.2
3,214,355 + A4249_RS15930 0.67 +0.1
3,214,356 - A4249_RS15930 0.67 +1.1
3,214,356 - A4249_RS15930 0.67 -1.3
3,214,357 + A4249_RS15930 0.67 -1.5
3,214,357 + A4249_RS15930 0.67 -0.2
3,214,357 + A4249_RS15930 0.67 -0.1
3,214,357 + A4249_RS15930 0.67 -0.4
3,214,358 - A4249_RS15930 0.67 +0.7
3,214,358 - A4249_RS15930 0.67 +0.9
3,214,358 - A4249_RS15930 0.67 -0.6
3,214,358 - A4249_RS15930 0.67 -0.7
3,214,358 - A4249_RS15930 0.67 +0.9
3,214,376 + A4249_RS15930 0.69 +0.3
3,214,376 + A4249_RS15930 0.69 +0.7
3,214,376 + A4249_RS15930 0.69 -0.8
3,214,376 + A4249_RS15930 0.69 +1.0
3,214,377 - A4249_RS15930 0.69 -0.5
3,214,377 - A4249_RS15930 0.69 -0.5
3,214,377 - A4249_RS15930 0.69 +0.4
3,214,457 + A4249_RS15930 0.76 -0.4
3,214,457 + A4249_RS15930 0.76 +0.2
3,214,458 - A4249_RS15930 0.76 -0.7

Or see this region's nucleotide sequence