Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14895

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14890 and A4249_RS14895 are separated by 79 nucleotidesA4249_RS14895 and A4249_RS14900 overlap by 4 nucleotides A4249_RS14890: A4249_RS14890 - substrate-binding domain-containing protein, at 3,013,242 to 3,014,309 _RS14890 A4249_RS14895: A4249_RS14895 - phosphonate ABC transporter, permease protein PhnE, at 3,014,389 to 3,015,201 _RS14895 A4249_RS14900: A4249_RS14900 - phosphate/phosphite/phosphonate ABC transporter substrate-binding protein, at 3,015,198 to 3,016,214 _RS14900 Position (kb) 3014 3015 3016Strain fitness (log2 ratio) -2 -1 0 1 2at 3014.345 kb on + strandat 3014.345 kb on + strandat 3014.345 kb on + strandat 3014.345 kb on + strandat 3014.346 kb on - strandat 3014.346 kb on - strandat 3014.358 kb on + strandat 3014.358 kb on + strandat 3014.358 kb on + strandat 3014.359 kb on - strandat 3014.359 kb on - strandat 3014.359 kb on - strandat 3014.359 kb on - strandat 3014.359 kb on - strandat 3014.359 kb on - strandat 3014.359 kb on - strandat 3014.359 kb on - strandat 3014.359 kb on - strandat 3014.359 kb on - strandat 3014.390 kb on + strandat 3014.390 kb on + strandat 3014.390 kb on + strandat 3014.579 kb on + strand, within A4249_RS14895at 3014.794 kb on + strand, within A4249_RS14895at 3014.795 kb on - strand, within A4249_RS14895at 3015.089 kb on + strand, within A4249_RS14895at 3015.089 kb on + strand, within A4249_RS14895at 3015.089 kb on + strand, within A4249_RS14895at 3015.089 kb on + strand, within A4249_RS14895at 3015.090 kb on - strand, within A4249_RS14895at 3015.090 kb on - strand, within A4249_RS14895at 3015.090 kb on - strand, within A4249_RS14895at 3015.090 kb on - strand, within A4249_RS14895at 3015.331 kb on + strand, within A4249_RS14900at 3015.331 kb on + strand, within A4249_RS14900at 3015.331 kb on + strand, within A4249_RS14900at 3015.331 kb on + strand, within A4249_RS14900at 3015.331 kb on + strand, within A4249_RS14900at 3015.332 kb on - strand, within A4249_RS14900at 3015.332 kb on - strand, within A4249_RS14900at 3015.332 kb on - strand, within A4249_RS14900at 3015.362 kb on - strand, within A4249_RS14900at 3015.421 kb on + strand, within A4249_RS14900at 3015.421 kb on + strand, within A4249_RS14900at 3015.421 kb on + strand, within A4249_RS14900at 3015.421 kb on + strand, within A4249_RS14900at 3015.422 kb on - strand, within A4249_RS14900at 3015.422 kb on - strand, within A4249_RS14900at 3015.422 kb on - strand, within A4249_RS14900at 3015.754 kb on + strand, within A4249_RS14900at 3015.754 kb on + strand, within A4249_RS14900at 3015.754 kb on + strand, within A4249_RS14900at 3015.755 kb on - strand, within A4249_RS14900at 3015.755 kb on - strand, within A4249_RS14900at 3015.826 kb on + strand, within A4249_RS14900at 3015.826 kb on + strand, within A4249_RS14900at 3015.826 kb on + strand, within A4249_RS14900at 3015.826 kb on + strand, within A4249_RS14900at 3015.826 kb on + strand, within A4249_RS14900at 3015.827 kb on - strand, within A4249_RS14900at 3015.827 kb on - strand, within A4249_RS14900at 3015.827 kb on - strand, within A4249_RS14900at 3015.827 kb on - strand, within A4249_RS14900at 3015.827 kb on - strand, within A4249_RS14900at 3015.827 kb on - strand, within A4249_RS14900at 3015.827 kb on - strand, within A4249_RS14900at 3015.827 kb on - strand, within A4249_RS14900at 3015.827 kb on - strand, within A4249_RS14900at 3015.964 kb on + strand, within A4249_RS14900at 3015.964 kb on + strand, within A4249_RS14900at 3015.964 kb on + strand, within A4249_RS14900at 3015.964 kb on + strand, within A4249_RS14900at 3015.965 kb on - strand, within A4249_RS14900at 3015.979 kb on + strand, within A4249_RS14900at 3015.980 kb on - strand, within A4249_RS14900at 3015.980 kb on - strand, within A4249_RS14900at 3016.179 kb on + strandat 3016.179 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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3,014,345 + -0.3
3,014,345 + -0.1
3,014,345 + -1.0
3,014,345 + -1.8
3,014,346 - -0.1
3,014,346 - -0.0
3,014,358 + -0.0
3,014,358 + -0.6
3,014,358 + +1.9
3,014,359 - +0.0
3,014,359 - -0.6
3,014,359 - -0.2
3,014,359 - +1.4
3,014,359 - -0.4
3,014,359 - +0.0
3,014,359 - +0.9
3,014,359 - +0.2
3,014,359 - -0.2
3,014,359 - +0.1
3,014,390 + +0.5
3,014,390 + -1.2
3,014,390 + +2.7
3,014,579 + A4249_RS14895 0.23 -0.1
3,014,794 + A4249_RS14895 0.50 -0.7
3,014,795 - A4249_RS14895 0.50 +0.9
3,015,089 + A4249_RS14895 0.86 -0.2
3,015,089 + A4249_RS14895 0.86 -0.1
3,015,089 + A4249_RS14895 0.86 +0.1
3,015,089 + A4249_RS14895 0.86 -0.2
3,015,090 - A4249_RS14895 0.86 -0.1
3,015,090 - A4249_RS14895 0.86 +0.3
3,015,090 - A4249_RS14895 0.86 +1.9
3,015,090 - A4249_RS14895 0.86 +0.1
3,015,331 + A4249_RS14900 0.13 +1.1
3,015,331 + A4249_RS14900 0.13 -0.5
3,015,331 + A4249_RS14900 0.13 +0.8
3,015,331 + A4249_RS14900 0.13 -0.1
3,015,331 + A4249_RS14900 0.13 -0.3
3,015,332 - A4249_RS14900 0.13 -0.4
3,015,332 - A4249_RS14900 0.13 +0.7
3,015,332 - A4249_RS14900 0.13 +2.5
3,015,362 - A4249_RS14900 0.16 +0.1
3,015,421 + A4249_RS14900 0.22 +1.3
3,015,421 + A4249_RS14900 0.22 +0.0
3,015,421 + A4249_RS14900 0.22 +0.3
3,015,421 + A4249_RS14900 0.22 -0.3
3,015,422 - A4249_RS14900 0.22 -0.4
3,015,422 - A4249_RS14900 0.22 +0.1
3,015,422 - A4249_RS14900 0.22 -1.5
3,015,754 + A4249_RS14900 0.55 -0.8
3,015,754 + A4249_RS14900 0.55 -1.2
3,015,754 + A4249_RS14900 0.55 +0.2
3,015,755 - A4249_RS14900 0.55 +0.9
3,015,755 - A4249_RS14900 0.55 +0.1
3,015,826 + A4249_RS14900 0.62 +1.4
3,015,826 + A4249_RS14900 0.62 +0.1
3,015,826 + A4249_RS14900 0.62 -0.7
3,015,826 + A4249_RS14900 0.62 +0.7
3,015,826 + A4249_RS14900 0.62 -0.9
3,015,827 - A4249_RS14900 0.62 -1.2
3,015,827 - A4249_RS14900 0.62 +0.5
3,015,827 - A4249_RS14900 0.62 +1.1
3,015,827 - A4249_RS14900 0.62 -1.2
3,015,827 - A4249_RS14900 0.62 -0.5
3,015,827 - A4249_RS14900 0.62 -0.3
3,015,827 - A4249_RS14900 0.62 +1.3
3,015,827 - A4249_RS14900 0.62 -1.2
3,015,827 - A4249_RS14900 0.62 +0.5
3,015,964 + A4249_RS14900 0.75 -0.1
3,015,964 + A4249_RS14900 0.75 +0.3
3,015,964 + A4249_RS14900 0.75 -0.5
3,015,964 + A4249_RS14900 0.75 -2.0
3,015,965 - A4249_RS14900 0.75 -0.7
3,015,979 + A4249_RS14900 0.77 -1.2
3,015,980 - A4249_RS14900 0.77 +0.3
3,015,980 - A4249_RS14900 0.77 +1.4
3,016,179 + -0.3
3,016,179 + -0.1

Or see this region's nucleotide sequence