Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14805

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14795 and A4249_RS14800 are separated by 61 nucleotidesA4249_RS14800 and A4249_RS14805 are separated by 117 nucleotidesA4249_RS14805 and A4249_RS14810 are separated by 17 nucleotidesA4249_RS14810 and A4249_RS14815 are separated by 79 nucleotides A4249_RS14795: A4249_RS14795 - acyl dehydratase, at 2,996,148 to 2,996,555 _RS14795 A4249_RS14800: A4249_RS14800 - SapC family protein, at 2,996,617 to 2,997,399 _RS14800 A4249_RS14805: A4249_RS14805 - Fur family transcriptional regulator, at 2,997,517 to 2,998,005 _RS14805 A4249_RS14810: A4249_RS14810 - alpha/beta hydrolase, at 2,998,023 to 2,998,898 _RS14810 A4249_RS14815: A4249_RS14815 - nicotinate-nucleotide adenylyltransferase, at 2,998,978 to 2,999,643 _RS14815 Position (kb) 2997 2998 2999Strain fitness (log2 ratio) -2 -1 0 1 2at 2996.618 kb on + strandat 2996.618 kb on + strandat 2996.618 kb on + strandat 2996.618 kb on + strandat 2996.618 kb on + strandat 2996.618 kb on + strandat 2996.618 kb on + strandat 2996.619 kb on - strandat 2996.619 kb on - strandat 2996.619 kb on - strandat 2996.619 kb on - strandat 2996.706 kb on - strand, within A4249_RS14800at 2996.706 kb on - strand, within A4249_RS14800at 2996.789 kb on + strand, within A4249_RS14800at 2996.789 kb on + strand, within A4249_RS14800at 2996.789 kb on + strand, within A4249_RS14800at 2996.789 kb on + strand, within A4249_RS14800at 2996.789 kb on + strand, within A4249_RS14800at 2996.789 kb on + strand, within A4249_RS14800at 2996.789 kb on + strand, within A4249_RS14800at 2996.789 kb on + strand, within A4249_RS14800at 2996.789 kb on + strand, within A4249_RS14800at 2996.790 kb on - strand, within A4249_RS14800at 2996.790 kb on - strand, within A4249_RS14800at 2996.790 kb on - strand, within A4249_RS14800at 2996.790 kb on - strand, within A4249_RS14800at 2996.790 kb on - strand, within A4249_RS14800at 2996.790 kb on - strand, within A4249_RS14800at 2996.792 kb on + strand, within A4249_RS14800at 2996.793 kb on - strand, within A4249_RS14800at 2996.793 kb on - strand, within A4249_RS14800at 2996.960 kb on + strand, within A4249_RS14800at 2996.960 kb on + strand, within A4249_RS14800at 2997.095 kb on + strand, within A4249_RS14800at 2997.095 kb on + strand, within A4249_RS14800at 2997.095 kb on + strand, within A4249_RS14800at 2997.095 kb on + strand, within A4249_RS14800at 2997.095 kb on + strand, within A4249_RS14800at 2997.096 kb on - strand, within A4249_RS14800at 2997.096 kb on - strand, within A4249_RS14800at 2997.096 kb on - strand, within A4249_RS14800at 2997.107 kb on + strand, within A4249_RS14800at 2997.107 kb on + strand, within A4249_RS14800at 2997.107 kb on + strand, within A4249_RS14800at 2997.107 kb on + strand, within A4249_RS14800at 2997.108 kb on - strand, within A4249_RS14800at 2997.108 kb on - strand, within A4249_RS14800at 2997.108 kb on - strand, within A4249_RS14800at 2997.108 kb on - strand, within A4249_RS14800at 2997.108 kb on - strand, within A4249_RS14800at 2997.108 kb on - strand, within A4249_RS14800at 2997.108 kb on - strand, within A4249_RS14800at 2997.215 kb on + strand, within A4249_RS14800at 2997.261 kb on + strand, within A4249_RS14800at 2997.284 kb on + strand, within A4249_RS14800at 2997.284 kb on + strand, within A4249_RS14800at 2997.284 kb on + strand, within A4249_RS14800at 2997.285 kb on - strand, within A4249_RS14800at 2997.285 kb on - strand, within A4249_RS14800at 2997.285 kb on - strand, within A4249_RS14800at 2997.285 kb on - strand, within A4249_RS14800at 2997.354 kb on - strandat 2997.354 kb on - strandat 2997.354 kb on - strandat 2997.354 kb on - strandat 2997.441 kb on + strandat 2997.441 kb on + strandat 2997.441 kb on + strandat 2997.441 kb on + strandat 2997.442 kb on - strandat 2997.442 kb on - strandat 2997.442 kb on - strandat 2997.505 kb on + strandat 2997.505 kb on + strandat 2997.505 kb on + strandat 2997.505 kb on + strandat 2997.505 kb on + strandat 2997.505 kb on + strandat 2997.505 kb on + strandat 2997.505 kb on + strandat 2997.505 kb on + strandat 2997.506 kb on - strandat 2997.506 kb on - strandat 2997.506 kb on - strandat 2997.506 kb on - strandat 2997.516 kb on + strandat 2997.516 kb on + strandat 2997.688 kb on + strand, within A4249_RS14805at 2997.688 kb on + strand, within A4249_RS14805at 2997.689 kb on - strand, within A4249_RS14805at 2997.689 kb on - strand, within A4249_RS14805at 2997.808 kb on + strand, within A4249_RS14805at 2997.808 kb on + strand, within A4249_RS14805at 2997.808 kb on + strand, within A4249_RS14805at 2997.808 kb on + strand, within A4249_RS14805at 2997.808 kb on + strand, within A4249_RS14805at 2997.809 kb on - strand, within A4249_RS14805at 2998.161 kb on + strand, within A4249_RS14810at 2998.161 kb on + strand, within A4249_RS14810at 2998.161 kb on + strand, within A4249_RS14810at 2998.162 kb on - strand, within A4249_RS14810at 2998.162 kb on - strand, within A4249_RS14810at 2998.162 kb on - strand, within A4249_RS14810at 2998.162 kb on - strand, within A4249_RS14810at 2998.162 kb on - strand, within A4249_RS14810at 2998.346 kb on + strand, within A4249_RS14810at 2998.346 kb on + strand, within A4249_RS14810at 2998.346 kb on + strand, within A4249_RS14810at 2998.346 kb on + strand, within A4249_RS14810at 2998.346 kb on + strand, within A4249_RS14810at 2998.347 kb on - strand, within A4249_RS14810at 2998.347 kb on - strand, within A4249_RS14810at 2998.347 kb on - strand, within A4249_RS14810at 2998.347 kb on - strand, within A4249_RS14810at 2998.347 kb on - strand, within A4249_RS14810at 2998.347 kb on - strand, within A4249_RS14810at 2998.557 kb on + strand, within A4249_RS14810at 2998.608 kb on + strand, within A4249_RS14810at 2998.608 kb on + strand, within A4249_RS14810at 2998.608 kb on + strand, within A4249_RS14810at 2998.608 kb on + strand, within A4249_RS14810at 2998.608 kb on + strand, within A4249_RS14810at 2998.608 kb on + strand, within A4249_RS14810at 2998.608 kb on + strand, within A4249_RS14810at 2998.683 kb on + strand, within A4249_RS14810at 2998.683 kb on + strand, within A4249_RS14810at 2998.684 kb on - strand, within A4249_RS14810at 2998.684 kb on - strand, within A4249_RS14810at 2998.864 kb on + strandat 2998.911 kb on + strandat 2998.934 kb on - strandat 2998.934 kb on - strandat 2998.935 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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2,996,618 + -0.7
2,996,618 + -1.5
2,996,618 + -0.5
2,996,618 + -0.1
2,996,618 + -1.0
2,996,618 + -0.4
2,996,618 + +0.4
2,996,619 - +0.7
2,996,619 - -2.4
2,996,619 - +0.6
2,996,619 - +0.4
2,996,706 - A4249_RS14800 0.11 +0.0
2,996,706 - A4249_RS14800 0.11 +0.9
2,996,789 + A4249_RS14800 0.22 +0.2
2,996,789 + A4249_RS14800 0.22 -0.0
2,996,789 + A4249_RS14800 0.22 +0.5
2,996,789 + A4249_RS14800 0.22 -1.5
2,996,789 + A4249_RS14800 0.22 -0.7
2,996,789 + A4249_RS14800 0.22 -0.3
2,996,789 + A4249_RS14800 0.22 -0.1
2,996,789 + A4249_RS14800 0.22 +0.3
2,996,789 + A4249_RS14800 0.22 +1.2
2,996,790 - A4249_RS14800 0.22 +0.4
2,996,790 - A4249_RS14800 0.22 +1.2
2,996,790 - A4249_RS14800 0.22 +0.2
2,996,790 - A4249_RS14800 0.22 -0.2
2,996,790 - A4249_RS14800 0.22 -0.0
2,996,790 - A4249_RS14800 0.22 -0.1
2,996,792 + A4249_RS14800 0.22 -0.5
2,996,793 - A4249_RS14800 0.22 +0.9
2,996,793 - A4249_RS14800 0.22 +0.0
2,996,960 + A4249_RS14800 0.44 -2.0
2,996,960 + A4249_RS14800 0.44 -0.5
2,997,095 + A4249_RS14800 0.61 -0.0
2,997,095 + A4249_RS14800 0.61 +0.2
2,997,095 + A4249_RS14800 0.61 -0.5
2,997,095 + A4249_RS14800 0.61 +0.7
2,997,095 + A4249_RS14800 0.61 -0.3
2,997,096 - A4249_RS14800 0.61 -0.2
2,997,096 - A4249_RS14800 0.61 -0.3
2,997,096 - A4249_RS14800 0.61 -0.1
2,997,107 + A4249_RS14800 0.63 +1.1
2,997,107 + A4249_RS14800 0.63 +0.3
2,997,107 + A4249_RS14800 0.63 +0.8
2,997,107 + A4249_RS14800 0.63 -0.5
2,997,108 - A4249_RS14800 0.63 +0.5
2,997,108 - A4249_RS14800 0.63 -0.2
2,997,108 - A4249_RS14800 0.63 +0.7
2,997,108 - A4249_RS14800 0.63 -0.0
2,997,108 - A4249_RS14800 0.63 -0.2
2,997,108 - A4249_RS14800 0.63 -0.8
2,997,108 - A4249_RS14800 0.63 -1.1
2,997,215 + A4249_RS14800 0.76 -0.3
2,997,261 + A4249_RS14800 0.82 -0.5
2,997,284 + A4249_RS14800 0.85 +0.2
2,997,284 + A4249_RS14800 0.85 +1.2
2,997,284 + A4249_RS14800 0.85 +2.4
2,997,285 - A4249_RS14800 0.85 +0.3
2,997,285 - A4249_RS14800 0.85 +0.3
2,997,285 - A4249_RS14800 0.85 +1.9
2,997,285 - A4249_RS14800 0.85 +0.3
2,997,354 - -0.8
2,997,354 - -1.7
2,997,354 - +0.2
2,997,354 - -0.0
2,997,441 + -0.2
2,997,441 + -0.1
2,997,441 + -1.3
2,997,441 + +0.1
2,997,442 - -0.2
2,997,442 - +0.2
2,997,442 - +0.2
2,997,505 + -0.3
2,997,505 + -1.0
2,997,505 + -0.7
2,997,505 + -2.4
2,997,505 + -0.2
2,997,505 + -0.1
2,997,505 + -0.4
2,997,505 + -1.0
2,997,505 + +0.4
2,997,506 - +0.1
2,997,506 - -0.2
2,997,506 - -0.0
2,997,506 - -0.7
2,997,516 + -1.1
2,997,516 + -0.2
2,997,688 + A4249_RS14805 0.35 +0.1
2,997,688 + A4249_RS14805 0.35 +0.2
2,997,689 - A4249_RS14805 0.35 +0.7
2,997,689 - A4249_RS14805 0.35 -0.0
2,997,808 + A4249_RS14805 0.60 +0.9
2,997,808 + A4249_RS14805 0.60 +0.1
2,997,808 + A4249_RS14805 0.60 +0.8
2,997,808 + A4249_RS14805 0.60 +0.2
2,997,808 + A4249_RS14805 0.60 +0.8
2,997,809 - A4249_RS14805 0.60 -0.4
2,998,161 + A4249_RS14810 0.16 +0.4
2,998,161 + A4249_RS14810 0.16 -0.4
2,998,161 + A4249_RS14810 0.16 +0.6
2,998,162 - A4249_RS14810 0.16 +0.2
2,998,162 - A4249_RS14810 0.16 -0.3
2,998,162 - A4249_RS14810 0.16 -0.4
2,998,162 - A4249_RS14810 0.16 +0.1
2,998,162 - A4249_RS14810 0.16 +0.2
2,998,346 + A4249_RS14810 0.37 -0.3
2,998,346 + A4249_RS14810 0.37 -0.5
2,998,346 + A4249_RS14810 0.37 +0.2
2,998,346 + A4249_RS14810 0.37 -1.0
2,998,346 + A4249_RS14810 0.37 +0.4
2,998,347 - A4249_RS14810 0.37 +0.1
2,998,347 - A4249_RS14810 0.37 -0.5
2,998,347 - A4249_RS14810 0.37 -0.7
2,998,347 - A4249_RS14810 0.37 +0.0
2,998,347 - A4249_RS14810 0.37 +1.3
2,998,347 - A4249_RS14810 0.37 -0.7
2,998,557 + A4249_RS14810 0.61 -1.9
2,998,608 + A4249_RS14810 0.67 -0.8
2,998,608 + A4249_RS14810 0.67 -0.9
2,998,608 + A4249_RS14810 0.67 -0.6
2,998,608 + A4249_RS14810 0.67 -0.2
2,998,608 + A4249_RS14810 0.67 -0.7
2,998,608 + A4249_RS14810 0.67 -1.0
2,998,608 + A4249_RS14810 0.67 +0.3
2,998,683 + A4249_RS14810 0.75 -1.1
2,998,683 + A4249_RS14810 0.75 -0.1
2,998,684 - A4249_RS14810 0.75 -1.2
2,998,684 - A4249_RS14810 0.75 -0.6
2,998,864 + +0.0
2,998,911 + +0.7
2,998,934 - -0.8
2,998,934 - -0.3
2,998,935 + +0.6

Or see this region's nucleotide sequence