Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS16975 and A4249_RS14100 overlap by 4 nucleotides A4249_RS14100 and A4249_RS14105 are separated by 349 nucleotides A4249_RS14105 and A4249_RS14110 are separated by 744 nucleotides
A4249_RS16975: A4249_RS16975 - hypothetical protein, at 2,844,785 to 2,845,378
_RS16975
A4249_RS14100: A4249_RS14100 - hypothetical protein, at 2,845,375 to 2,845,686
_RS14100
A4249_RS14105: A4249_RS14105 - hypothetical protein, at 2,846,036 to 2,846,266
_RS14105
A4249_RS14110: A4249_RS14110 - type II toxin-antitoxin system RelE/ParE family toxin, at 2,847,011 to 2,847,313
_RS14110
Position (kb)
2846
2847 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2845.044 kb on + strand, within A4249_RS16975 at 2845.044 kb on + strand, within A4249_RS16975 at 2845.057 kb on + strand, within A4249_RS16975 at 2845.057 kb on + strand, within A4249_RS16975 at 2845.058 kb on - strand, within A4249_RS16975 at 2845.058 kb on - strand, within A4249_RS16975 at 2845.058 kb on - strand, within A4249_RS16975 at 2845.058 kb on - strand, within A4249_RS16975 at 2845.081 kb on + strand, within A4249_RS16975 at 2845.081 kb on + strand, within A4249_RS16975 at 2845.081 kb on + strand, within A4249_RS16975 at 2845.082 kb on - strand, within A4249_RS16975 at 2845.082 kb on - strand, within A4249_RS16975 at 2845.154 kb on + strand, within A4249_RS16975 at 2845.155 kb on - strand, within A4249_RS16975 at 2845.155 kb on - strand, within A4249_RS16975 at 2845.155 kb on - strand, within A4249_RS16975 at 2845.194 kb on - strand, within A4249_RS16975 at 2845.215 kb on + strand, within A4249_RS16975 at 2845.215 kb on + strand, within A4249_RS16975 at 2845.215 kb on + strand, within A4249_RS16975 at 2845.215 kb on + strand, within A4249_RS16975 at 2845.215 kb on + strand, within A4249_RS16975 at 2845.216 kb on - strand, within A4249_RS16975 at 2845.216 kb on - strand, within A4249_RS16975 at 2845.216 kb on - strand, within A4249_RS16975 at 2845.216 kb on - strand, within A4249_RS16975 at 2845.216 kb on - strand, within A4249_RS16975 at 2845.216 kb on - strand, within A4249_RS16975 at 2845.216 kb on - strand, within A4249_RS16975 at 2845.216 kb on - strand, within A4249_RS16975 at 2845.233 kb on - strand, within A4249_RS16975 at 2845.302 kb on + strand, within A4249_RS16975 at 2845.302 kb on + strand, within A4249_RS16975 at 2845.302 kb on + strand, within A4249_RS16975 at 2845.302 kb on + strand, within A4249_RS16975 at 2845.302 kb on + strand, within A4249_RS16975 at 2845.302 kb on + strand, within A4249_RS16975 at 2845.302 kb on + strand, within A4249_RS16975 at 2845.302 kb on + strand, within A4249_RS16975 at 2845.303 kb on - strand, within A4249_RS16975 at 2845.303 kb on - strand, within A4249_RS16975 at 2845.303 kb on - strand, within A4249_RS16975 at 2845.303 kb on - strand, within A4249_RS16975 at 2845.376 kb on + strand at 2845.376 kb on + strand at 2845.376 kb on + strand at 2845.377 kb on - strand at 2845.377 kb on - strand at 2845.377 kb on - strand at 2845.377 kb on - strand at 2845.377 kb on - strand at 2845.377 kb on - strand at 2845.377 kb on - strand at 2845.377 kb on - strand at 2845.377 kb on - strand at 2845.429 kb on - strand, within A4249_RS14100 at 2845.443 kb on + strand, within A4249_RS14100 at 2845.443 kb on + strand, within A4249_RS14100 at 2845.444 kb on - strand, within A4249_RS14100 at 2845.444 kb on - strand, within A4249_RS14100 at 2845.445 kb on + strand, within A4249_RS14100 at 2845.445 kb on + strand, within A4249_RS14100 at 2845.445 kb on + strand, within A4249_RS14100 at 2845.458 kb on + strand, within A4249_RS14100 at 2845.458 kb on + strand, within A4249_RS14100 at 2845.458 kb on + strand, within A4249_RS14100 at 2845.458 kb on + strand, within A4249_RS14100 at 2845.458 kb on + strand, within A4249_RS14100 at 2845.459 kb on - strand, within A4249_RS14100 at 2845.459 kb on - strand, within A4249_RS14100 at 2845.459 kb on - strand, within A4249_RS14100 at 2845.488 kb on + strand, within A4249_RS14100 at 2845.488 kb on + strand, within A4249_RS14100 at 2845.489 kb on - strand, within A4249_RS14100 at 2845.543 kb on - strand, within A4249_RS14100 at 2845.571 kb on + strand, within A4249_RS14100 at 2845.571 kb on + strand, within A4249_RS14100 at 2845.571 kb on + strand, within A4249_RS14100 at 2845.571 kb on + strand, within A4249_RS14100 at 2845.571 kb on + strand, within A4249_RS14100 at 2845.572 kb on - strand, within A4249_RS14100 at 2845.572 kb on - strand, within A4249_RS14100 at 2845.572 kb on - strand, within A4249_RS14100 at 2845.600 kb on + strand, within A4249_RS14100 at 2845.600 kb on + strand, within A4249_RS14100 at 2845.600 kb on + strand, within A4249_RS14100 at 2845.600 kb on + strand, within A4249_RS14100 at 2845.600 kb on + strand, within A4249_RS14100 at 2845.601 kb on - strand, within A4249_RS14100 at 2845.616 kb on + strand, within A4249_RS14100 at 2845.617 kb on - strand, within A4249_RS14100 at 2845.655 kb on + strand at 2845.655 kb on + strand at 2845.655 kb on + strand at 2845.655 kb on + strand at 2845.655 kb on + strand at 2845.655 kb on + strand at 2845.655 kb on + strand at 2845.655 kb on + strand at 2845.656 kb on - strand at 2845.656 kb on - strand at 2845.656 kb on - strand at 2845.936 kb on + strand at 2845.936 kb on + strand at 2845.936 kb on + strand at 2845.936 kb on + strand at 2845.936 kb on + strand at 2845.936 kb on + strand at 2845.936 kb on + strand at 2845.936 kb on + strand at 2845.936 kb on + strand at 2845.936 kb on + strand at 2845.936 kb on + strand at 2845.937 kb on - strand at 2845.937 kb on - strand at 2845.937 kb on - strand at 2845.937 kb on - strand at 2845.965 kb on - strand at 2845.970 kb on - strand at 2846.006 kb on + strand at 2846.007 kb on - strand at 2846.007 kb on - strand at 2846.019 kb on + strand at 2846.200 kb on + strand, within A4249_RS14105 at 2846.201 kb on - strand, within A4249_RS14105 at 2846.201 kb on - strand, within A4249_RS14105 at 2846.201 kb on - strand, within A4249_RS14105 at 2846.201 kb on - strand, within A4249_RS14105 at 2846.264 kb on + strand at 2846.264 kb on + strand at 2846.264 kb on + strand at 2846.265 kb on - strand at 2846.265 kb on - strand at 2846.286 kb on + strand at 2846.287 kb on - strand at 2846.298 kb on + strand at 2846.299 kb on - strand at 2846.299 kb on - strand at 2846.299 kb on - strand at 2846.469 kb on + strand at 2846.469 kb on + strand at 2846.469 kb on + strand at 2846.469 kb on + strand at 2846.470 kb on - strand at 2846.470 kb on - strand at 2846.470 kb on - strand at 2846.470 kb on - strand at 2846.470 kb on - strand at 2846.513 kb on + strand at 2846.513 kb on + strand at 2846.513 kb on + strand at 2846.513 kb on + strand at 2846.513 kb on + strand at 2846.513 kb on + strand at 2846.513 kb on + strand at 2846.513 kb on + strand at 2846.513 kb on + strand at 2846.513 kb on + strand at 2846.513 kb on + strand at 2846.514 kb on - strand at 2846.514 kb on - strand at 2846.514 kb on - strand at 2846.514 kb on - strand at 2846.514 kb on - strand at 2846.514 kb on - strand at 2846.514 kb on - strand at 2846.514 kb on - strand at 2846.575 kb on + strand at 2846.576 kb on - strand at 2846.576 kb on - strand at 2846.576 kb on - strand at 2846.576 kb on - strand at 2846.576 kb on - strand at 2846.576 kb on - strand at 2846.577 kb on + strand at 2846.577 kb on + strand at 2846.577 kb on + strand at 2846.578 kb on - strand at 2846.578 kb on - strand at 2846.697 kb on + strand at 2846.697 kb on + strand at 2846.741 kb on + strand at 2846.819 kb on + strand at 2846.861 kb on + strand at 2846.907 kb on + strand at 2846.912 kb on - strand at 2846.943 kb on + strand at 2846.947 kb on + strand at 2846.947 kb on + strand at 2846.947 kb on + strand at 2846.947 kb on + strand at 2846.947 kb on + strand at 2846.948 kb on - strand at 2846.948 kb on - strand at 2846.948 kb on - strand at 2846.956 kb on + strand at 2846.971 kb on + strand at 2846.971 kb on + strand at 2846.971 kb on + strand at 2846.972 kb on - strand at 2846.972 kb on - strand at 2846.972 kb on - strand at 2846.974 kb on + strand at 2846.975 kb on - strand at 2846.981 kb on + strand at 2846.982 kb on - strand at 2847.069 kb on + strand, within A4249_RS14110 at 2847.070 kb on + strand, within A4249_RS14110 at 2847.070 kb on + strand, within A4249_RS14110 at 2847.070 kb on + strand, within A4249_RS14110 at 2847.070 kb on + strand, within A4249_RS14110 at 2847.070 kb on + strand, within A4249_RS14110 at 2847.071 kb on - strand, within A4249_RS14110 at 2847.071 kb on - strand, within A4249_RS14110 at 2847.071 kb on - strand, within A4249_RS14110 at 2847.083 kb on + strand, within A4249_RS14110 at 2847.083 kb on + strand, within A4249_RS14110 at 2847.083 kb on + strand, within A4249_RS14110 at 2847.083 kb on + strand, within A4249_RS14110 at 2847.083 kb on + strand, within A4249_RS14110 at 2847.083 kb on + strand, within A4249_RS14110 at 2847.083 kb on + strand, within A4249_RS14110 at 2847.083 kb on + strand, within A4249_RS14110 at 2847.083 kb on + strand, within A4249_RS14110 at 2847.084 kb on - strand, within A4249_RS14110 at 2847.084 kb on - strand, within A4249_RS14110 at 2847.084 kb on - strand, within A4249_RS14110 at 2847.084 kb on - strand, within A4249_RS14110 at 2847.084 kb on - strand, within A4249_RS14110 at 2847.084 kb on - strand, within A4249_RS14110 at 2847.084 kb on - strand, within A4249_RS14110 at 2847.084 kb on - strand, within A4249_RS14110 at 2847.084 kb on - strand, within A4249_RS14110 at 2847.085 kb on - strand, within A4249_RS14110 at 2847.086 kb on + strand, within A4249_RS14110 at 2847.086 kb on + strand, within A4249_RS14110 at 2847.086 kb on + strand, within A4249_RS14110 at 2847.086 kb on + strand, within A4249_RS14110 at 2847.086 kb on + strand, within A4249_RS14110 at 2847.086 kb on + strand, within A4249_RS14110 at 2847.086 kb on + strand, within A4249_RS14110 at 2847.086 kb on + strand, within A4249_RS14110 at 2847.087 kb on - strand, within A4249_RS14110 at 2847.087 kb on - strand, within A4249_RS14110 at 2847.087 kb on - strand, within A4249_RS14110 at 2847.087 kb on - strand, within A4249_RS14110 at 2847.087 kb on - strand, within A4249_RS14110 at 2847.087 kb on - strand, within A4249_RS14110 at 2847.232 kb on + strand, within A4249_RS14110
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 2,845,044 + A4249_RS16975 0.44 +1.4 2,845,044 + A4249_RS16975 0.44 +0.1 2,845,057 + A4249_RS16975 0.46 -0.5 2,845,057 + A4249_RS16975 0.46 +0.2 2,845,058 - A4249_RS16975 0.46 -1.7 2,845,058 - A4249_RS16975 0.46 +0.7 2,845,058 - A4249_RS16975 0.46 +1.3 2,845,058 - A4249_RS16975 0.46 +0.2 2,845,081 + A4249_RS16975 0.50 -0.8 2,845,081 + A4249_RS16975 0.50 -0.2 2,845,081 + A4249_RS16975 0.50 +0.6 2,845,082 - A4249_RS16975 0.50 -0.4 2,845,082 - A4249_RS16975 0.50 +0.1 2,845,154 + A4249_RS16975 0.62 +1.0 2,845,155 - A4249_RS16975 0.62 +0.7 2,845,155 - A4249_RS16975 0.62 +0.3 2,845,155 - A4249_RS16975 0.62 -0.2 2,845,194 - A4249_RS16975 0.69 -0.3 2,845,215 + A4249_RS16975 0.72 +0.3 2,845,215 + A4249_RS16975 0.72 -0.3 2,845,215 + A4249_RS16975 0.72 -0.3 2,845,215 + A4249_RS16975 0.72 +0.2 2,845,215 + A4249_RS16975 0.72 -0.5 2,845,216 - A4249_RS16975 0.73 -0.3 2,845,216 - A4249_RS16975 0.73 -0.1 2,845,216 - A4249_RS16975 0.73 -0.5 2,845,216 - A4249_RS16975 0.73 -0.5 2,845,216 - A4249_RS16975 0.73 -0.3 2,845,216 - A4249_RS16975 0.73 +0.4 2,845,216 - A4249_RS16975 0.73 +0.5 2,845,216 - A4249_RS16975 0.73 -0.1 2,845,233 - A4249_RS16975 0.75 +1.0 2,845,302 + A4249_RS16975 0.87 +1.2 2,845,302 + A4249_RS16975 0.87 -0.5 2,845,302 + A4249_RS16975 0.87 +0.2 2,845,302 + A4249_RS16975 0.87 +0.5 2,845,302 + A4249_RS16975 0.87 +0.9 2,845,302 + A4249_RS16975 0.87 +0.9 2,845,302 + A4249_RS16975 0.87 +0.4 2,845,302 + A4249_RS16975 0.87 +1.1 2,845,303 - A4249_RS16975 0.87 -0.0 2,845,303 - A4249_RS16975 0.87 +0.0 2,845,303 - A4249_RS16975 0.87 +0.7 2,845,303 - A4249_RS16975 0.87 -0.4 2,845,376 + +0.8 2,845,376 + +0.6 2,845,376 + +0.2 2,845,377 - -0.6 2,845,377 - -0.3 2,845,377 - -0.3 2,845,377 - -0.1 2,845,377 - -0.8 2,845,377 - +1.0 2,845,377 - -1.6 2,845,377 - -0.1 2,845,377 - +0.2 2,845,429 - A4249_RS14100 0.17 -0.9 2,845,443 + A4249_RS14100 0.22 -0.8 2,845,443 + A4249_RS14100 0.22 -0.9 2,845,444 - A4249_RS14100 0.22 +0.2 2,845,444 - A4249_RS14100 0.22 +1.0 2,845,445 + A4249_RS14100 0.22 +0.3 2,845,445 + A4249_RS14100 0.22 -0.8 2,845,445 + A4249_RS14100 0.22 +1.8 2,845,458 + A4249_RS14100 0.27 +0.4 2,845,458 + A4249_RS14100 0.27 -0.6 2,845,458 + A4249_RS14100 0.27 -1.3 2,845,458 + A4249_RS14100 0.27 +0.5 2,845,458 + A4249_RS14100 0.27 -0.0 2,845,459 - A4249_RS14100 0.27 -0.4 2,845,459 - A4249_RS14100 0.27 -0.3 2,845,459 - A4249_RS14100 0.27 +0.7 2,845,488 + A4249_RS14100 0.36 +0.1 2,845,488 + A4249_RS14100 0.36 +0.1 2,845,489 - A4249_RS14100 0.37 +0.4 2,845,543 - A4249_RS14100 0.54 +0.4 2,845,571 + A4249_RS14100 0.63 -0.6 2,845,571 + A4249_RS14100 0.63 -1.2 2,845,571 + A4249_RS14100 0.63 +0.0 2,845,571 + A4249_RS14100 0.63 +1.0 2,845,571 + A4249_RS14100 0.63 -0.6 2,845,572 - A4249_RS14100 0.63 +0.3 2,845,572 - A4249_RS14100 0.63 -0.3 2,845,572 - A4249_RS14100 0.63 -0.2 2,845,600 + A4249_RS14100 0.72 -0.7 2,845,600 + A4249_RS14100 0.72 +0.1 2,845,600 + A4249_RS14100 0.72 -0.9 2,845,600 + A4249_RS14100 0.72 +0.2 2,845,600 + A4249_RS14100 0.72 -0.1 2,845,601 - A4249_RS14100 0.72 +0.5 2,845,616 + A4249_RS14100 0.77 -0.1 2,845,617 - A4249_RS14100 0.78 +0.1 2,845,655 + +1.3 2,845,655 + -0.1 2,845,655 + -0.2 2,845,655 + +0.8 2,845,655 + +0.2 2,845,655 + +0.1 2,845,655 + +0.3 2,845,655 + +0.6 2,845,656 - -0.2 2,845,656 - +1.5 2,845,656 - +1.5 2,845,936 + +2.3 2,845,936 + +0.5 2,845,936 + +0.3 2,845,936 + -0.2 2,845,936 + -0.9 2,845,936 + +0.4 2,845,936 + +0.9 2,845,936 + -0.6 2,845,936 + -0.2 2,845,936 + +0.2 2,845,936 + +0.2 2,845,937 - -0.5 2,845,937 - -0.3 2,845,937 - +0.4 2,845,937 - +1.2 2,845,965 - -0.3 2,845,970 - +0.8 2,846,006 + -0.2 2,846,007 - -0.4 2,846,007 - -1.4 2,846,019 + -0.3 2,846,200 + A4249_RS14105 0.71 -0.3 2,846,201 - A4249_RS14105 0.71 -0.3 2,846,201 - A4249_RS14105 0.71 -0.3 2,846,201 - A4249_RS14105 0.71 +0.1 2,846,201 - A4249_RS14105 0.71 -1.1 2,846,264 + -0.3 2,846,264 + +0.2 2,846,264 + -0.2 2,846,265 - +0.4 2,846,265 - -0.3 2,846,286 + -0.4 2,846,287 - +0.1 2,846,298 + -0.0 2,846,299 - -1.2 2,846,299 - +0.3 2,846,299 - -0.3 2,846,469 + +0.9 2,846,469 + -0.8 2,846,469 + -0.3 2,846,469 + +0.7 2,846,470 - -0.6 2,846,470 - -0.9 2,846,470 - -1.0 2,846,470 - +0.0 2,846,470 - +0.2 2,846,513 + +1.6 2,846,513 + -0.9 2,846,513 + -0.4 2,846,513 + +1.5 2,846,513 + +0.4 2,846,513 + -1.1 2,846,513 + -0.2 2,846,513 + -0.2 2,846,513 + -0.6 2,846,513 + +1.1 2,846,513 + +0.3 2,846,514 - -0.3 2,846,514 - -1.1 2,846,514 - -0.2 2,846,514 - +1.0 2,846,514 - -0.1 2,846,514 - +0.8 2,846,514 - +0.0 2,846,514 - -0.4 2,846,575 + +0.1 2,846,576 - -0.3 2,846,576 - -0.6 2,846,576 - -0.0 2,846,576 - -0.7 2,846,576 - +0.3 2,846,576 - +0.1 2,846,577 + +0.4 2,846,577 + +0.5 2,846,577 + -0.2 2,846,578 - +0.9 2,846,578 - -0.9 2,846,697 + -1.4 2,846,697 + +1.3 2,846,741 + -0.1 2,846,819 + +0.4 2,846,861 + +0.8 2,846,907 + -0.5 2,846,912 - +0.2 2,846,943 + +1.1 2,846,947 + +0.4 2,846,947 + +1.7 2,846,947 + -0.5 2,846,947 + +0.1 2,846,947 + +0.4 2,846,948 - +0.1 2,846,948 - +0.2 2,846,948 - +0.6 2,846,956 + +1.1 2,846,971 + -0.1 2,846,971 + -0.8 2,846,971 + -0.5 2,846,972 - -1.2 2,846,972 - -0.1 2,846,972 - +0.3 2,846,974 + -0.9 2,846,975 - +0.7 2,846,981 + +1.1 2,846,982 - -0.4 2,847,069 + A4249_RS14110 0.19 -0.1 2,847,070 + A4249_RS14110 0.19 -0.5 2,847,070 + A4249_RS14110 0.19 -0.4 2,847,070 + A4249_RS14110 0.19 +1.2 2,847,070 + A4249_RS14110 0.19 +0.1 2,847,070 + A4249_RS14110 0.19 -0.0 2,847,071 - A4249_RS14110 0.20 +0.5 2,847,071 - A4249_RS14110 0.20 -0.3 2,847,071 - A4249_RS14110 0.20 +0.1 2,847,083 + A4249_RS14110 0.24 +0.3 2,847,083 + A4249_RS14110 0.24 -0.6 2,847,083 + A4249_RS14110 0.24 -0.3 2,847,083 + A4249_RS14110 0.24 -0.2 2,847,083 + A4249_RS14110 0.24 -0.8 2,847,083 + A4249_RS14110 0.24 -0.3 2,847,083 + A4249_RS14110 0.24 -1.1 2,847,083 + A4249_RS14110 0.24 -1.3 2,847,083 + A4249_RS14110 0.24 -1.7 2,847,084 - A4249_RS14110 0.24 +0.6 2,847,084 - A4249_RS14110 0.24 -0.2 2,847,084 - A4249_RS14110 0.24 -0.6 2,847,084 - A4249_RS14110 0.24 +0.2 2,847,084 - A4249_RS14110 0.24 -0.6 2,847,084 - A4249_RS14110 0.24 -0.4 2,847,084 - A4249_RS14110 0.24 -0.5 2,847,084 - A4249_RS14110 0.24 +1.1 2,847,084 - A4249_RS14110 0.24 -0.2 2,847,085 - A4249_RS14110 0.24 +0.6 2,847,086 + A4249_RS14110 0.25 -0.4 2,847,086 + A4249_RS14110 0.25 +0.4 2,847,086 + A4249_RS14110 0.25 -0.4 2,847,086 + A4249_RS14110 0.25 +0.7 2,847,086 + A4249_RS14110 0.25 -0.2 2,847,086 + A4249_RS14110 0.25 +0.0 2,847,086 + A4249_RS14110 0.25 +0.8 2,847,086 + A4249_RS14110 0.25 +0.9 2,847,087 - A4249_RS14110 0.25 -1.8 2,847,087 - A4249_RS14110 0.25 -0.0 2,847,087 - A4249_RS14110 0.25 -1.4 2,847,087 - A4249_RS14110 0.25 -1.2 2,847,087 - A4249_RS14110 0.25 +0.2 2,847,087 - A4249_RS14110 0.25 +0.1 2,847,232 + A4249_RS14110 0.73 +0.3
Or see this region's nucleotide sequence