Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14105

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS16975 and A4249_RS14100 overlap by 4 nucleotidesA4249_RS14100 and A4249_RS14105 are separated by 349 nucleotidesA4249_RS14105 and A4249_RS14110 are separated by 744 nucleotides A4249_RS16975: A4249_RS16975 - hypothetical protein, at 2,844,785 to 2,845,378 _RS16975 A4249_RS14100: A4249_RS14100 - hypothetical protein, at 2,845,375 to 2,845,686 _RS14100 A4249_RS14105: A4249_RS14105 - hypothetical protein, at 2,846,036 to 2,846,266 _RS14105 A4249_RS14110: A4249_RS14110 - type II toxin-antitoxin system RelE/ParE family toxin, at 2,847,011 to 2,847,313 _RS14110 Position (kb) 2846 2847Strain fitness (log2 ratio) -2 -1 0 1 2at 2845.044 kb on + strand, within A4249_RS16975at 2845.044 kb on + strand, within A4249_RS16975at 2845.057 kb on + strand, within A4249_RS16975at 2845.057 kb on + strand, within A4249_RS16975at 2845.058 kb on - strand, within A4249_RS16975at 2845.058 kb on - strand, within A4249_RS16975at 2845.058 kb on - strand, within A4249_RS16975at 2845.058 kb on - strand, within A4249_RS16975at 2845.081 kb on + strand, within A4249_RS16975at 2845.081 kb on + strand, within A4249_RS16975at 2845.081 kb on + strand, within A4249_RS16975at 2845.082 kb on - strand, within A4249_RS16975at 2845.082 kb on - strand, within A4249_RS16975at 2845.154 kb on + strand, within A4249_RS16975at 2845.155 kb on - strand, within A4249_RS16975at 2845.155 kb on - strand, within A4249_RS16975at 2845.155 kb on - strand, within A4249_RS16975at 2845.194 kb on - strand, within A4249_RS16975at 2845.215 kb on + strand, within A4249_RS16975at 2845.215 kb on + strand, within A4249_RS16975at 2845.215 kb on + strand, within A4249_RS16975at 2845.215 kb on + strand, within A4249_RS16975at 2845.215 kb on + strand, within A4249_RS16975at 2845.216 kb on - strand, within A4249_RS16975at 2845.216 kb on - strand, within A4249_RS16975at 2845.216 kb on - strand, within A4249_RS16975at 2845.216 kb on - strand, within A4249_RS16975at 2845.216 kb on - strand, within A4249_RS16975at 2845.216 kb on - strand, within A4249_RS16975at 2845.216 kb on - strand, within A4249_RS16975at 2845.216 kb on - strand, within A4249_RS16975at 2845.233 kb on - strand, within A4249_RS16975at 2845.302 kb on + strand, within A4249_RS16975at 2845.302 kb on + strand, within A4249_RS16975at 2845.302 kb on + strand, within A4249_RS16975at 2845.302 kb on + strand, within A4249_RS16975at 2845.302 kb on + strand, within A4249_RS16975at 2845.302 kb on + strand, within A4249_RS16975at 2845.302 kb on + strand, within A4249_RS16975at 2845.302 kb on + strand, within A4249_RS16975at 2845.303 kb on - strand, within A4249_RS16975at 2845.303 kb on - strand, within A4249_RS16975at 2845.303 kb on - strand, within A4249_RS16975at 2845.303 kb on - strand, within A4249_RS16975at 2845.376 kb on + strandat 2845.376 kb on + strandat 2845.376 kb on + strandat 2845.377 kb on - strandat 2845.377 kb on - strandat 2845.377 kb on - strandat 2845.377 kb on - strandat 2845.377 kb on - strandat 2845.377 kb on - strandat 2845.377 kb on - strandat 2845.377 kb on - strandat 2845.377 kb on - strandat 2845.429 kb on - strand, within A4249_RS14100at 2845.443 kb on + strand, within A4249_RS14100at 2845.443 kb on + strand, within A4249_RS14100at 2845.444 kb on - strand, within A4249_RS14100at 2845.444 kb on - strand, within A4249_RS14100at 2845.445 kb on + strand, within A4249_RS14100at 2845.445 kb on + strand, within A4249_RS14100at 2845.445 kb on + strand, within A4249_RS14100at 2845.458 kb on + strand, within A4249_RS14100at 2845.458 kb on + strand, within A4249_RS14100at 2845.458 kb on + strand, within A4249_RS14100at 2845.458 kb on + strand, within A4249_RS14100at 2845.458 kb on + strand, within A4249_RS14100at 2845.459 kb on - strand, within A4249_RS14100at 2845.459 kb on - strand, within A4249_RS14100at 2845.459 kb on - strand, within A4249_RS14100at 2845.488 kb on + strand, within A4249_RS14100at 2845.488 kb on + strand, within A4249_RS14100at 2845.489 kb on - strand, within A4249_RS14100at 2845.543 kb on - strand, within A4249_RS14100at 2845.571 kb on + strand, within A4249_RS14100at 2845.571 kb on + strand, within A4249_RS14100at 2845.571 kb on + strand, within A4249_RS14100at 2845.571 kb on + strand, within A4249_RS14100at 2845.571 kb on + strand, within A4249_RS14100at 2845.572 kb on - strand, within A4249_RS14100at 2845.572 kb on - strand, within A4249_RS14100at 2845.572 kb on - strand, within A4249_RS14100at 2845.600 kb on + strand, within A4249_RS14100at 2845.600 kb on + strand, within A4249_RS14100at 2845.600 kb on + strand, within A4249_RS14100at 2845.600 kb on + strand, within A4249_RS14100at 2845.600 kb on + strand, within A4249_RS14100at 2845.601 kb on - strand, within A4249_RS14100at 2845.616 kb on + strand, within A4249_RS14100at 2845.617 kb on - strand, within A4249_RS14100at 2845.655 kb on + strandat 2845.655 kb on + strandat 2845.655 kb on + strandat 2845.655 kb on + strandat 2845.655 kb on + strandat 2845.655 kb on + strandat 2845.655 kb on + strandat 2845.655 kb on + strandat 2845.656 kb on - strandat 2845.656 kb on - strandat 2845.656 kb on - strandat 2845.936 kb on + strandat 2845.936 kb on + strandat 2845.936 kb on + strandat 2845.936 kb on + strandat 2845.936 kb on + strandat 2845.936 kb on + strandat 2845.936 kb on + strandat 2845.936 kb on + strandat 2845.936 kb on + strandat 2845.936 kb on + strandat 2845.936 kb on + strandat 2845.937 kb on - strandat 2845.937 kb on - strandat 2845.937 kb on - strandat 2845.937 kb on - strandat 2845.965 kb on - strandat 2845.970 kb on - strandat 2846.006 kb on + strandat 2846.007 kb on - strandat 2846.007 kb on - strandat 2846.019 kb on + strandat 2846.200 kb on + strand, within A4249_RS14105at 2846.201 kb on - strand, within A4249_RS14105at 2846.201 kb on - strand, within A4249_RS14105at 2846.201 kb on - strand, within A4249_RS14105at 2846.201 kb on - strand, within A4249_RS14105at 2846.264 kb on + strandat 2846.264 kb on + strandat 2846.264 kb on + strandat 2846.265 kb on - strandat 2846.265 kb on - strandat 2846.286 kb on + strandat 2846.287 kb on - strandat 2846.298 kb on + strandat 2846.299 kb on - strandat 2846.299 kb on - strandat 2846.299 kb on - strandat 2846.469 kb on + strandat 2846.469 kb on + strandat 2846.469 kb on + strandat 2846.469 kb on + strandat 2846.470 kb on - strandat 2846.470 kb on - strandat 2846.470 kb on - strandat 2846.470 kb on - strandat 2846.470 kb on - strandat 2846.513 kb on + strandat 2846.513 kb on + strandat 2846.513 kb on + strandat 2846.513 kb on + strandat 2846.513 kb on + strandat 2846.513 kb on + strandat 2846.513 kb on + strandat 2846.513 kb on + strandat 2846.513 kb on + strandat 2846.513 kb on + strandat 2846.513 kb on + strandat 2846.514 kb on - strandat 2846.514 kb on - strandat 2846.514 kb on - strandat 2846.514 kb on - strandat 2846.514 kb on - strandat 2846.514 kb on - strandat 2846.514 kb on - strandat 2846.514 kb on - strandat 2846.575 kb on + strandat 2846.576 kb on - strandat 2846.576 kb on - strandat 2846.576 kb on - strandat 2846.576 kb on - strandat 2846.576 kb on - strandat 2846.576 kb on - strandat 2846.577 kb on + strandat 2846.577 kb on + strandat 2846.577 kb on + strandat 2846.578 kb on - strandat 2846.578 kb on - strandat 2846.697 kb on + strandat 2846.697 kb on + strandat 2846.741 kb on + strandat 2846.819 kb on + strandat 2846.861 kb on + strandat 2846.907 kb on + strandat 2846.912 kb on - strandat 2846.943 kb on + strandat 2846.947 kb on + strandat 2846.947 kb on + strandat 2846.947 kb on + strandat 2846.947 kb on + strandat 2846.947 kb on + strandat 2846.948 kb on - strandat 2846.948 kb on - strandat 2846.948 kb on - strandat 2846.956 kb on + strandat 2846.971 kb on + strandat 2846.971 kb on + strandat 2846.971 kb on + strandat 2846.972 kb on - strandat 2846.972 kb on - strandat 2846.972 kb on - strandat 2846.974 kb on + strandat 2846.975 kb on - strandat 2846.981 kb on + strandat 2846.982 kb on - strandat 2847.069 kb on + strand, within A4249_RS14110at 2847.070 kb on + strand, within A4249_RS14110at 2847.070 kb on + strand, within A4249_RS14110at 2847.070 kb on + strand, within A4249_RS14110at 2847.070 kb on + strand, within A4249_RS14110at 2847.070 kb on + strand, within A4249_RS14110at 2847.071 kb on - strand, within A4249_RS14110at 2847.071 kb on - strand, within A4249_RS14110at 2847.071 kb on - strand, within A4249_RS14110at 2847.083 kb on + strand, within A4249_RS14110at 2847.083 kb on + strand, within A4249_RS14110at 2847.083 kb on + strand, within A4249_RS14110at 2847.083 kb on + strand, within A4249_RS14110at 2847.083 kb on + strand, within A4249_RS14110at 2847.083 kb on + strand, within A4249_RS14110at 2847.083 kb on + strand, within A4249_RS14110at 2847.083 kb on + strand, within A4249_RS14110at 2847.083 kb on + strand, within A4249_RS14110at 2847.084 kb on - strand, within A4249_RS14110at 2847.084 kb on - strand, within A4249_RS14110at 2847.084 kb on - strand, within A4249_RS14110at 2847.084 kb on - strand, within A4249_RS14110at 2847.084 kb on - strand, within A4249_RS14110at 2847.084 kb on - strand, within A4249_RS14110at 2847.084 kb on - strand, within A4249_RS14110at 2847.084 kb on - strand, within A4249_RS14110at 2847.084 kb on - strand, within A4249_RS14110at 2847.085 kb on - strand, within A4249_RS14110at 2847.086 kb on + strand, within A4249_RS14110at 2847.086 kb on + strand, within A4249_RS14110at 2847.086 kb on + strand, within A4249_RS14110at 2847.086 kb on + strand, within A4249_RS14110at 2847.086 kb on + strand, within A4249_RS14110at 2847.086 kb on + strand, within A4249_RS14110at 2847.086 kb on + strand, within A4249_RS14110at 2847.086 kb on + strand, within A4249_RS14110at 2847.087 kb on - strand, within A4249_RS14110at 2847.087 kb on - strand, within A4249_RS14110at 2847.087 kb on - strand, within A4249_RS14110at 2847.087 kb on - strand, within A4249_RS14110at 2847.087 kb on - strand, within A4249_RS14110at 2847.087 kb on - strand, within A4249_RS14110at 2847.232 kb on + strand, within A4249_RS14110

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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2,845,044 + A4249_RS16975 0.44 +1.4
2,845,044 + A4249_RS16975 0.44 +0.1
2,845,057 + A4249_RS16975 0.46 -0.5
2,845,057 + A4249_RS16975 0.46 +0.2
2,845,058 - A4249_RS16975 0.46 -1.7
2,845,058 - A4249_RS16975 0.46 +0.7
2,845,058 - A4249_RS16975 0.46 +1.3
2,845,058 - A4249_RS16975 0.46 +0.2
2,845,081 + A4249_RS16975 0.50 -0.8
2,845,081 + A4249_RS16975 0.50 -0.2
2,845,081 + A4249_RS16975 0.50 +0.6
2,845,082 - A4249_RS16975 0.50 -0.4
2,845,082 - A4249_RS16975 0.50 +0.1
2,845,154 + A4249_RS16975 0.62 +1.0
2,845,155 - A4249_RS16975 0.62 +0.7
2,845,155 - A4249_RS16975 0.62 +0.3
2,845,155 - A4249_RS16975 0.62 -0.2
2,845,194 - A4249_RS16975 0.69 -0.3
2,845,215 + A4249_RS16975 0.72 +0.3
2,845,215 + A4249_RS16975 0.72 -0.3
2,845,215 + A4249_RS16975 0.72 -0.3
2,845,215 + A4249_RS16975 0.72 +0.2
2,845,215 + A4249_RS16975 0.72 -0.5
2,845,216 - A4249_RS16975 0.73 -0.3
2,845,216 - A4249_RS16975 0.73 -0.1
2,845,216 - A4249_RS16975 0.73 -0.5
2,845,216 - A4249_RS16975 0.73 -0.5
2,845,216 - A4249_RS16975 0.73 -0.3
2,845,216 - A4249_RS16975 0.73 +0.4
2,845,216 - A4249_RS16975 0.73 +0.5
2,845,216 - A4249_RS16975 0.73 -0.1
2,845,233 - A4249_RS16975 0.75 +1.0
2,845,302 + A4249_RS16975 0.87 +1.2
2,845,302 + A4249_RS16975 0.87 -0.5
2,845,302 + A4249_RS16975 0.87 +0.2
2,845,302 + A4249_RS16975 0.87 +0.5
2,845,302 + A4249_RS16975 0.87 +0.9
2,845,302 + A4249_RS16975 0.87 +0.9
2,845,302 + A4249_RS16975 0.87 +0.4
2,845,302 + A4249_RS16975 0.87 +1.1
2,845,303 - A4249_RS16975 0.87 -0.0
2,845,303 - A4249_RS16975 0.87 +0.0
2,845,303 - A4249_RS16975 0.87 +0.7
2,845,303 - A4249_RS16975 0.87 -0.4
2,845,376 + +0.8
2,845,376 + +0.6
2,845,376 + +0.2
2,845,377 - -0.6
2,845,377 - -0.3
2,845,377 - -0.3
2,845,377 - -0.1
2,845,377 - -0.8
2,845,377 - +1.0
2,845,377 - -1.6
2,845,377 - -0.1
2,845,377 - +0.2
2,845,429 - A4249_RS14100 0.17 -0.9
2,845,443 + A4249_RS14100 0.22 -0.8
2,845,443 + A4249_RS14100 0.22 -0.9
2,845,444 - A4249_RS14100 0.22 +0.2
2,845,444 - A4249_RS14100 0.22 +1.0
2,845,445 + A4249_RS14100 0.22 +0.3
2,845,445 + A4249_RS14100 0.22 -0.8
2,845,445 + A4249_RS14100 0.22 +1.8
2,845,458 + A4249_RS14100 0.27 +0.4
2,845,458 + A4249_RS14100 0.27 -0.6
2,845,458 + A4249_RS14100 0.27 -1.3
2,845,458 + A4249_RS14100 0.27 +0.5
2,845,458 + A4249_RS14100 0.27 -0.0
2,845,459 - A4249_RS14100 0.27 -0.4
2,845,459 - A4249_RS14100 0.27 -0.3
2,845,459 - A4249_RS14100 0.27 +0.7
2,845,488 + A4249_RS14100 0.36 +0.1
2,845,488 + A4249_RS14100 0.36 +0.1
2,845,489 - A4249_RS14100 0.37 +0.4
2,845,543 - A4249_RS14100 0.54 +0.4
2,845,571 + A4249_RS14100 0.63 -0.6
2,845,571 + A4249_RS14100 0.63 -1.2
2,845,571 + A4249_RS14100 0.63 +0.0
2,845,571 + A4249_RS14100 0.63 +1.0
2,845,571 + A4249_RS14100 0.63 -0.6
2,845,572 - A4249_RS14100 0.63 +0.3
2,845,572 - A4249_RS14100 0.63 -0.3
2,845,572 - A4249_RS14100 0.63 -0.2
2,845,600 + A4249_RS14100 0.72 -0.7
2,845,600 + A4249_RS14100 0.72 +0.1
2,845,600 + A4249_RS14100 0.72 -0.9
2,845,600 + A4249_RS14100 0.72 +0.2
2,845,600 + A4249_RS14100 0.72 -0.1
2,845,601 - A4249_RS14100 0.72 +0.5
2,845,616 + A4249_RS14100 0.77 -0.1
2,845,617 - A4249_RS14100 0.78 +0.1
2,845,655 + +1.3
2,845,655 + -0.1
2,845,655 + -0.2
2,845,655 + +0.8
2,845,655 + +0.2
2,845,655 + +0.1
2,845,655 + +0.3
2,845,655 + +0.6
2,845,656 - -0.2
2,845,656 - +1.5
2,845,656 - +1.5
2,845,936 + +2.3
2,845,936 + +0.5
2,845,936 + +0.3
2,845,936 + -0.2
2,845,936 + -0.9
2,845,936 + +0.4
2,845,936 + +0.9
2,845,936 + -0.6
2,845,936 + -0.2
2,845,936 + +0.2
2,845,936 + +0.2
2,845,937 - -0.5
2,845,937 - -0.3
2,845,937 - +0.4
2,845,937 - +1.2
2,845,965 - -0.3
2,845,970 - +0.8
2,846,006 + -0.2
2,846,007 - -0.4
2,846,007 - -1.4
2,846,019 + -0.3
2,846,200 + A4249_RS14105 0.71 -0.3
2,846,201 - A4249_RS14105 0.71 -0.3
2,846,201 - A4249_RS14105 0.71 -0.3
2,846,201 - A4249_RS14105 0.71 +0.1
2,846,201 - A4249_RS14105 0.71 -1.1
2,846,264 + -0.3
2,846,264 + +0.2
2,846,264 + -0.2
2,846,265 - +0.4
2,846,265 - -0.3
2,846,286 + -0.4
2,846,287 - +0.1
2,846,298 + -0.0
2,846,299 - -1.2
2,846,299 - +0.3
2,846,299 - -0.3
2,846,469 + +0.9
2,846,469 + -0.8
2,846,469 + -0.3
2,846,469 + +0.7
2,846,470 - -0.6
2,846,470 - -0.9
2,846,470 - -1.0
2,846,470 - +0.0
2,846,470 - +0.2
2,846,513 + +1.6
2,846,513 + -0.9
2,846,513 + -0.4
2,846,513 + +1.5
2,846,513 + +0.4
2,846,513 + -1.1
2,846,513 + -0.2
2,846,513 + -0.2
2,846,513 + -0.6
2,846,513 + +1.1
2,846,513 + +0.3
2,846,514 - -0.3
2,846,514 - -1.1
2,846,514 - -0.2
2,846,514 - +1.0
2,846,514 - -0.1
2,846,514 - +0.8
2,846,514 - +0.0
2,846,514 - -0.4
2,846,575 + +0.1
2,846,576 - -0.3
2,846,576 - -0.6
2,846,576 - -0.0
2,846,576 - -0.7
2,846,576 - +0.3
2,846,576 - +0.1
2,846,577 + +0.4
2,846,577 + +0.5
2,846,577 + -0.2
2,846,578 - +0.9
2,846,578 - -0.9
2,846,697 + -1.4
2,846,697 + +1.3
2,846,741 + -0.1
2,846,819 + +0.4
2,846,861 + +0.8
2,846,907 + -0.5
2,846,912 - +0.2
2,846,943 + +1.1
2,846,947 + +0.4
2,846,947 + +1.7
2,846,947 + -0.5
2,846,947 + +0.1
2,846,947 + +0.4
2,846,948 - +0.1
2,846,948 - +0.2
2,846,948 - +0.6
2,846,956 + +1.1
2,846,971 + -0.1
2,846,971 + -0.8
2,846,971 + -0.5
2,846,972 - -1.2
2,846,972 - -0.1
2,846,972 - +0.3
2,846,974 + -0.9
2,846,975 - +0.7
2,846,981 + +1.1
2,846,982 - -0.4
2,847,069 + A4249_RS14110 0.19 -0.1
2,847,070 + A4249_RS14110 0.19 -0.5
2,847,070 + A4249_RS14110 0.19 -0.4
2,847,070 + A4249_RS14110 0.19 +1.2
2,847,070 + A4249_RS14110 0.19 +0.1
2,847,070 + A4249_RS14110 0.19 -0.0
2,847,071 - A4249_RS14110 0.20 +0.5
2,847,071 - A4249_RS14110 0.20 -0.3
2,847,071 - A4249_RS14110 0.20 +0.1
2,847,083 + A4249_RS14110 0.24 +0.3
2,847,083 + A4249_RS14110 0.24 -0.6
2,847,083 + A4249_RS14110 0.24 -0.3
2,847,083 + A4249_RS14110 0.24 -0.2
2,847,083 + A4249_RS14110 0.24 -0.8
2,847,083 + A4249_RS14110 0.24 -0.3
2,847,083 + A4249_RS14110 0.24 -1.1
2,847,083 + A4249_RS14110 0.24 -1.3
2,847,083 + A4249_RS14110 0.24 -1.7
2,847,084 - A4249_RS14110 0.24 +0.6
2,847,084 - A4249_RS14110 0.24 -0.2
2,847,084 - A4249_RS14110 0.24 -0.6
2,847,084 - A4249_RS14110 0.24 +0.2
2,847,084 - A4249_RS14110 0.24 -0.6
2,847,084 - A4249_RS14110 0.24 -0.4
2,847,084 - A4249_RS14110 0.24 -0.5
2,847,084 - A4249_RS14110 0.24 +1.1
2,847,084 - A4249_RS14110 0.24 -0.2
2,847,085 - A4249_RS14110 0.24 +0.6
2,847,086 + A4249_RS14110 0.25 -0.4
2,847,086 + A4249_RS14110 0.25 +0.4
2,847,086 + A4249_RS14110 0.25 -0.4
2,847,086 + A4249_RS14110 0.25 +0.7
2,847,086 + A4249_RS14110 0.25 -0.2
2,847,086 + A4249_RS14110 0.25 +0.0
2,847,086 + A4249_RS14110 0.25 +0.8
2,847,086 + A4249_RS14110 0.25 +0.9
2,847,087 - A4249_RS14110 0.25 -1.8
2,847,087 - A4249_RS14110 0.25 -0.0
2,847,087 - A4249_RS14110 0.25 -1.4
2,847,087 - A4249_RS14110 0.25 -1.2
2,847,087 - A4249_RS14110 0.25 +0.2
2,847,087 - A4249_RS14110 0.25 +0.1
2,847,232 + A4249_RS14110 0.73 +0.3

Or see this region's nucleotide sequence