Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13920 and A4249_RS13925 are separated by 155 nucleotides A4249_RS13925 and A4249_RS13930 are separated by 175 nucleotides A4249_RS13930 and A4249_RS13935 overlap by 4 nucleotides A4249_RS13935 and A4249_RS13940 are separated by 157 nucleotides
A4249_RS13920: A4249_RS13920 - TonB-dependent receptor, at 2,808,139 to 2,810,172
_RS13920
A4249_RS13925: A4249_RS13925 - tRNA-Arg, at 2,810,328 to 2,810,404
_RS13925
A4249_RS13930: A4249_RS13930 - SDR family oxidoreductase, at 2,810,580 to 2,811,377
_RS13930
A4249_RS13935: A4249_RS13935 - 4a-hydroxytetrahydrobiopterin dehydratase, at 2,811,374 to 2,811,679
_RS13935
A4249_RS13940: A4249_RS13940 - Crp/Fnr family transcriptional regulator, at 2,811,837 to 2,812,538
_RS13940
Position (kb)
2810
2811
2812 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2809.611 kb on + strand, within A4249_RS13920 at 2809.733 kb on + strand, within A4249_RS13920 at 2809.733 kb on + strand, within A4249_RS13920 at 2809.733 kb on + strand, within A4249_RS13920 at 2809.734 kb on - strand, within A4249_RS13920 at 2809.948 kb on - strand, within A4249_RS13920 at 2809.948 kb on - strand, within A4249_RS13920 at 2809.948 kb on - strand, within A4249_RS13920 at 2809.948 kb on - strand, within A4249_RS13920 at 2810.036 kb on + strand at 2810.036 kb on + strand at 2810.037 kb on - strand at 2810.037 kb on - strand at 2810.058 kb on + strand at 2810.059 kb on - strand at 2810.190 kb on - strand at 2810.278 kb on - strand at 2810.311 kb on + strand at 2810.311 kb on + strand at 2810.311 kb on + strand at 2810.311 kb on + strand at 2810.311 kb on + strand at 2810.311 kb on + strand at 2810.312 kb on - strand at 2810.312 kb on - strand at 2810.312 kb on - strand at 2810.312 kb on - strand at 2810.312 kb on - strand at 2810.312 kb on - strand at 2810.312 kb on - strand at 2810.312 kb on - strand at 2810.312 kb on - strand at 2810.437 kb on - strand at 2810.437 kb on - strand at 2810.437 kb on - strand at 2810.474 kb on + strand at 2810.545 kb on + strand at 2810.581 kb on + strand at 2810.653 kb on + strand at 2810.653 kb on + strand at 2810.653 kb on + strand at 2810.653 kb on + strand at 2810.653 kb on + strand at 2810.654 kb on - strand at 2810.654 kb on - strand at 2810.654 kb on - strand at 2810.654 kb on - strand at 2810.665 kb on + strand, within A4249_RS13930 at 2810.665 kb on + strand, within A4249_RS13930 at 2810.814 kb on + strand, within A4249_RS13930 at 2810.814 kb on + strand, within A4249_RS13930 at 2810.814 kb on + strand, within A4249_RS13930 at 2810.814 kb on + strand, within A4249_RS13930 at 2810.814 kb on + strand, within A4249_RS13930 at 2810.814 kb on + strand, within A4249_RS13930 at 2810.814 kb on + strand, within A4249_RS13930 at 2810.814 kb on + strand, within A4249_RS13930 at 2810.814 kb on + strand, within A4249_RS13930 at 2810.815 kb on - strand, within A4249_RS13930 at 2810.815 kb on - strand, within A4249_RS13930 at 2810.815 kb on - strand, within A4249_RS13930 at 2810.815 kb on - strand, within A4249_RS13930 at 2810.815 kb on - strand, within A4249_RS13930 at 2810.815 kb on - strand, within A4249_RS13930 at 2810.860 kb on + strand, within A4249_RS13930 at 2810.860 kb on + strand, within A4249_RS13930 at 2810.860 kb on + strand, within A4249_RS13930 at 2810.860 kb on + strand, within A4249_RS13930 at 2810.860 kb on + strand, within A4249_RS13930 at 2810.860 kb on + strand, within A4249_RS13930 at 2810.860 kb on + strand, within A4249_RS13930 at 2810.861 kb on - strand, within A4249_RS13930 at 2810.861 kb on - strand, within A4249_RS13930 at 2810.861 kb on - strand, within A4249_RS13930 at 2810.861 kb on - strand, within A4249_RS13930 at 2810.861 kb on - strand, within A4249_RS13930 at 2810.861 kb on - strand, within A4249_RS13930 at 2810.861 kb on - strand, within A4249_RS13930 at 2810.861 kb on - strand, within A4249_RS13930 at 2810.861 kb on - strand, within A4249_RS13930 at 2810.890 kb on + strand, within A4249_RS13930 at 2810.890 kb on + strand, within A4249_RS13930 at 2810.890 kb on + strand, within A4249_RS13930 at 2810.890 kb on + strand, within A4249_RS13930 at 2810.891 kb on - strand, within A4249_RS13930 at 2810.891 kb on - strand, within A4249_RS13930 at 2810.891 kb on - strand, within A4249_RS13930 at 2810.891 kb on - strand, within A4249_RS13930 at 2810.891 kb on - strand, within A4249_RS13930 at 2810.891 kb on - strand, within A4249_RS13930 at 2811.023 kb on - strand, within A4249_RS13930 at 2811.178 kb on + strand, within A4249_RS13930 at 2811.178 kb on + strand, within A4249_RS13930 at 2811.179 kb on - strand, within A4249_RS13930 at 2811.179 kb on - strand, within A4249_RS13930 at 2811.489 kb on + strand, within A4249_RS13935 at 2811.490 kb on - strand, within A4249_RS13935 at 2811.656 kb on + strand at 2811.656 kb on + strand at 2811.656 kb on + strand at 2811.656 kb on + strand at 2811.657 kb on - strand at 2811.706 kb on + strand at 2811.833 kb on + strand at 2811.834 kb on - strand at 2811.933 kb on + strand, within A4249_RS13940 at 2811.933 kb on + strand, within A4249_RS13940 at 2811.933 kb on + strand, within A4249_RS13940 at 2811.933 kb on + strand, within A4249_RS13940 at 2811.933 kb on + strand, within A4249_RS13940 at 2811.933 kb on + strand, within A4249_RS13940 at 2811.933 kb on + strand, within A4249_RS13940 at 2811.933 kb on + strand, within A4249_RS13940 at 2811.933 kb on + strand, within A4249_RS13940 at 2811.934 kb on - strand, within A4249_RS13940 at 2811.934 kb on - strand, within A4249_RS13940 at 2811.934 kb on - strand, within A4249_RS13940 at 2811.934 kb on - strand, within A4249_RS13940 at 2811.934 kb on - strand, within A4249_RS13940 at 2811.934 kb on - strand, within A4249_RS13940 at 2812.036 kb on + strand, within A4249_RS13940 at 2812.036 kb on + strand, within A4249_RS13940 at 2812.222 kb on + strand, within A4249_RS13940 at 2812.222 kb on + strand, within A4249_RS13940 at 2812.223 kb on - strand, within A4249_RS13940 at 2812.223 kb on - strand, within A4249_RS13940 at 2812.223 kb on - strand, within A4249_RS13940 at 2812.223 kb on - strand, within A4249_RS13940
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 2,809,611 + A4249_RS13920 0.72 -0.1 2,809,733 + A4249_RS13920 0.78 -0.5 2,809,733 + A4249_RS13920 0.78 -1.3 2,809,733 + A4249_RS13920 0.78 +0.1 2,809,734 - A4249_RS13920 0.78 +0.4 2,809,948 - A4249_RS13920 0.89 +0.2 2,809,948 - A4249_RS13920 0.89 -0.1 2,809,948 - A4249_RS13920 0.89 -0.0 2,809,948 - A4249_RS13920 0.89 -0.9 2,810,036 + -0.8 2,810,036 + -0.3 2,810,037 - -0.0 2,810,037 - +0.7 2,810,058 + -0.4 2,810,059 - -0.1 2,810,190 - +0.0 2,810,278 - +0.6 2,810,311 + -0.1 2,810,311 + +0.5 2,810,311 + +0.8 2,810,311 + +0.3 2,810,311 + +0.1 2,810,311 + -1.6 2,810,312 - +2.1 2,810,312 - -0.1 2,810,312 - +1.0 2,810,312 - -0.1 2,810,312 - -0.0 2,810,312 - +0.3 2,810,312 - -0.3 2,810,312 - -0.1 2,810,312 - -1.1 2,810,437 - +0.3 2,810,437 - -0.4 2,810,437 - -0.1 2,810,474 + -1.2 2,810,545 + -0.4 2,810,581 + -0.9 2,810,653 + +0.8 2,810,653 + -0.7 2,810,653 + +0.7 2,810,653 + -1.6 2,810,653 + +0.4 2,810,654 - +0.3 2,810,654 - +0.6 2,810,654 - +0.3 2,810,654 - -0.4 2,810,665 + A4249_RS13930 0.11 -1.3 2,810,665 + A4249_RS13930 0.11 +0.1 2,810,814 + A4249_RS13930 0.29 -0.3 2,810,814 + A4249_RS13930 0.29 +0.6 2,810,814 + A4249_RS13930 0.29 -0.4 2,810,814 + A4249_RS13930 0.29 +0.8 2,810,814 + A4249_RS13930 0.29 +0.5 2,810,814 + A4249_RS13930 0.29 +0.1 2,810,814 + A4249_RS13930 0.29 +0.2 2,810,814 + A4249_RS13930 0.29 +0.7 2,810,814 + A4249_RS13930 0.29 +0.7 2,810,815 - A4249_RS13930 0.29 -0.4 2,810,815 - A4249_RS13930 0.29 +0.4 2,810,815 - A4249_RS13930 0.29 -0.2 2,810,815 - A4249_RS13930 0.29 +0.2 2,810,815 - A4249_RS13930 0.29 +0.0 2,810,815 - A4249_RS13930 0.29 +0.4 2,810,860 + A4249_RS13930 0.35 +0.0 2,810,860 + A4249_RS13930 0.35 +0.5 2,810,860 + A4249_RS13930 0.35 -1.0 2,810,860 + A4249_RS13930 0.35 +0.8 2,810,860 + A4249_RS13930 0.35 +0.1 2,810,860 + A4249_RS13930 0.35 -0.4 2,810,860 + A4249_RS13930 0.35 +1.8 2,810,861 - A4249_RS13930 0.35 -0.4 2,810,861 - A4249_RS13930 0.35 +0.7 2,810,861 - A4249_RS13930 0.35 -0.3 2,810,861 - A4249_RS13930 0.35 -0.2 2,810,861 - A4249_RS13930 0.35 -3.0 2,810,861 - A4249_RS13930 0.35 -0.6 2,810,861 - A4249_RS13930 0.35 +0.1 2,810,861 - A4249_RS13930 0.35 +0.1 2,810,861 - A4249_RS13930 0.35 -1.4 2,810,890 + A4249_RS13930 0.39 +1.8 2,810,890 + A4249_RS13930 0.39 +0.6 2,810,890 + A4249_RS13930 0.39 +0.1 2,810,890 + A4249_RS13930 0.39 +0.2 2,810,891 - A4249_RS13930 0.39 +1.0 2,810,891 - A4249_RS13930 0.39 -0.6 2,810,891 - A4249_RS13930 0.39 +0.4 2,810,891 - A4249_RS13930 0.39 -2.0 2,810,891 - A4249_RS13930 0.39 +0.1 2,810,891 - A4249_RS13930 0.39 -0.1 2,811,023 - A4249_RS13930 0.56 -0.6 2,811,178 + A4249_RS13930 0.75 -0.1 2,811,178 + A4249_RS13930 0.75 +0.3 2,811,179 - A4249_RS13930 0.75 +0.1 2,811,179 - A4249_RS13930 0.75 +0.4 2,811,489 + A4249_RS13935 0.38 -1.5 2,811,490 - A4249_RS13935 0.38 +0.4 2,811,656 + +0.1 2,811,656 + -0.1 2,811,656 + -0.8 2,811,656 + +0.1 2,811,657 - -0.1 2,811,706 + +1.4 2,811,833 + +0.1 2,811,834 - -0.2 2,811,933 + A4249_RS13940 0.14 +0.0 2,811,933 + A4249_RS13940 0.14 -0.5 2,811,933 + A4249_RS13940 0.14 +0.3 2,811,933 + A4249_RS13940 0.14 -0.0 2,811,933 + A4249_RS13940 0.14 +0.5 2,811,933 + A4249_RS13940 0.14 +1.6 2,811,933 + A4249_RS13940 0.14 +0.9 2,811,933 + A4249_RS13940 0.14 +0.3 2,811,933 + A4249_RS13940 0.14 +0.9 2,811,934 - A4249_RS13940 0.14 -0.4 2,811,934 - A4249_RS13940 0.14 -1.7 2,811,934 - A4249_RS13940 0.14 +0.1 2,811,934 - A4249_RS13940 0.14 +0.4 2,811,934 - A4249_RS13940 0.14 -0.8 2,811,934 - A4249_RS13940 0.14 -0.0 2,812,036 + A4249_RS13940 0.28 -0.4 2,812,036 + A4249_RS13940 0.28 +0.8 2,812,222 + A4249_RS13940 0.55 +1.0 2,812,222 + A4249_RS13940 0.55 -0.3 2,812,223 - A4249_RS13940 0.55 +1.0 2,812,223 - A4249_RS13940 0.55 +0.2 2,812,223 - A4249_RS13940 0.55 -0.1 2,812,223 - A4249_RS13940 0.55 -0.5
Or see this region's nucleotide sequence