Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS13840

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS13830 and A4249_RS13835 overlap by 1 nucleotidesA4249_RS13835 and A4249_RS13840 are separated by 37 nucleotidesA4249_RS13840 and A4249_RS16675 are separated by 79 nucleotides A4249_RS13830: A4249_RS13830 - VOC family protein, at 2,791,430 to 2,791,870 _RS13830 A4249_RS13835: A4249_RS13835 - hypothetical protein, at 2,791,870 to 2,792,487 _RS13835 A4249_RS13840: A4249_RS13840 - DNA polymerase I, at 2,792,525 to 2,795,437 _RS13840 A4249_RS16675: A4249_RS16675 - hypothetical protein, at 2,795,517 to 2,796,467 _RS16675 Position (kb) 2792 2793 2794 2795 2796Strain fitness (log2 ratio) -2 -1 0 1 2at 2791.676 kb on + strand, within A4249_RS13830at 2791.676 kb on + strand, within A4249_RS13830at 2791.676 kb on + strand, within A4249_RS13830at 2791.676 kb on + strand, within A4249_RS13830at 2791.677 kb on - strand, within A4249_RS13830at 2791.677 kb on - strand, within A4249_RS13830at 2791.677 kb on - strand, within A4249_RS13830at 2791.677 kb on - strand, within A4249_RS13830at 2791.678 kb on + strand, within A4249_RS13830at 2791.678 kb on + strand, within A4249_RS13830at 2791.678 kb on + strand, within A4249_RS13830at 2791.679 kb on - strand, within A4249_RS13830at 2791.679 kb on - strand, within A4249_RS13830at 2791.679 kb on - strand, within A4249_RS13830at 2791.679 kb on - strand, within A4249_RS13830at 2791.679 kb on - strand, within A4249_RS13830at 2791.679 kb on - strand, within A4249_RS13830at 2791.694 kb on + strand, within A4249_RS13830at 2791.694 kb on + strand, within A4249_RS13830at 2791.694 kb on + strand, within A4249_RS13830at 2791.694 kb on + strand, within A4249_RS13830at 2791.694 kb on + strand, within A4249_RS13830at 2791.695 kb on - strand, within A4249_RS13830at 2791.695 kb on - strand, within A4249_RS13830at 2791.695 kb on - strand, within A4249_RS13830at 2791.695 kb on - strand, within A4249_RS13830at 2792.059 kb on + strand, within A4249_RS13835at 2792.059 kb on + strand, within A4249_RS13835at 2792.059 kb on + strand, within A4249_RS13835at 2792.059 kb on + strand, within A4249_RS13835at 2792.060 kb on - strand, within A4249_RS13835at 2792.060 kb on - strand, within A4249_RS13835at 2792.060 kb on - strand, within A4249_RS13835at 2792.060 kb on - strand, within A4249_RS13835at 2792.060 kb on - strand, within A4249_RS13835at 2792.060 kb on - strand, within A4249_RS13835at 2792.060 kb on - strand, within A4249_RS13835at 2792.060 kb on - strand, within A4249_RS13835at 2792.060 kb on - strand, within A4249_RS13835at 2792.060 kb on - strand, within A4249_RS13835at 2792.060 kb on - strand, within A4249_RS13835at 2792.083 kb on + strand, within A4249_RS13835at 2792.083 kb on + strand, within A4249_RS13835at 2792.084 kb on - strand, within A4249_RS13835at 2792.284 kb on + strand, within A4249_RS13835at 2792.284 kb on + strand, within A4249_RS13835at 2792.284 kb on + strand, within A4249_RS13835at 2792.285 kb on - strand, within A4249_RS13835at 2792.285 kb on - strand, within A4249_RS13835at 2792.285 kb on - strand, within A4249_RS13835at 2792.285 kb on - strand, within A4249_RS13835at 2792.333 kb on - strand, within A4249_RS13835at 2792.387 kb on - strand, within A4249_RS13835at 2792.387 kb on - strand, within A4249_RS13835at 2792.387 kb on - strand, within A4249_RS13835at 2792.387 kb on - strand, within A4249_RS13835at 2792.513 kb on + strandat 2792.513 kb on + strandat 2792.513 kb on + strandat 2792.513 kb on + strandat 2792.513 kb on + strandat 2792.513 kb on + strandat 2792.513 kb on + strandat 2792.513 kb on + strandat 2792.514 kb on - strandat 2792.514 kb on - strandat 2792.514 kb on - strandat 2792.514 kb on - strandat 2792.514 kb on - strandat 2792.514 kb on - strandat 2792.514 kb on - strandat 2795.443 kb on - strandat 2795.443 kb on - strandat 2795.443 kb on - strandat 2795.446 kb on + strandat 2795.446 kb on + strandat 2795.447 kb on - strandat 2795.447 kb on - strandat 2795.447 kb on - strandat 2795.447 kb on - strandat 2795.447 kb on - strandat 2795.473 kb on + strandat 2795.499 kb on - strandat 2795.516 kb on + strandat 2795.516 kb on + strandat 2795.516 kb on + strandat 2795.516 kb on + strandat 2795.516 kb on + strandat 2795.516 kb on + strandat 2795.516 kb on + strandat 2795.516 kb on + strandat 2795.516 kb on + strandat 2795.516 kb on + strandat 2795.517 kb on - strandat 2795.517 kb on - strandat 2795.517 kb on - strandat 2795.517 kb on - strandat 2795.517 kb on - strandat 2795.517 kb on - strandat 2795.533 kb on + strandat 2795.533 kb on + strandat 2795.534 kb on - strandat 2795.534 kb on - strandat 2795.534 kb on - strandat 2795.655 kb on + strand, within A4249_RS16675at 2795.655 kb on + strand, within A4249_RS16675at 2795.655 kb on + strand, within A4249_RS16675at 2795.655 kb on + strand, within A4249_RS16675at 2795.655 kb on + strand, within A4249_RS16675at 2795.655 kb on + strand, within A4249_RS16675at 2795.655 kb on + strand, within A4249_RS16675at 2795.655 kb on + strand, within A4249_RS16675at 2795.655 kb on + strand, within A4249_RS16675at 2795.655 kb on + strand, within A4249_RS16675at 2795.655 kb on + strand, within A4249_RS16675at 2795.656 kb on - strand, within A4249_RS16675at 2795.656 kb on - strand, within A4249_RS16675at 2795.656 kb on - strand, within A4249_RS16675at 2795.656 kb on - strand, within A4249_RS16675at 2795.656 kb on - strand, within A4249_RS16675at 2795.656 kb on - strand, within A4249_RS16675at 2795.656 kb on - strand, within A4249_RS16675at 2795.656 kb on - strand, within A4249_RS16675at 2795.656 kb on - strand, within A4249_RS16675at 2795.656 kb on - strand, within A4249_RS16675at 2795.656 kb on - strand, within A4249_RS16675at 2795.720 kb on + strand, within A4249_RS16675at 2795.721 kb on - strand, within A4249_RS16675at 2795.721 kb on - strand, within A4249_RS16675at 2795.780 kb on + strand, within A4249_RS16675at 2795.794 kb on + strand, within A4249_RS16675at 2795.795 kb on - strand, within A4249_RS16675at 2795.795 kb on - strand, within A4249_RS16675at 2795.831 kb on + strand, within A4249_RS16675at 2795.831 kb on + strand, within A4249_RS16675at 2795.831 kb on + strand, within A4249_RS16675at 2795.831 kb on + strand, within A4249_RS16675at 2795.831 kb on + strand, within A4249_RS16675at 2795.832 kb on - strand, within A4249_RS16675at 2795.833 kb on + strand, within A4249_RS16675at 2795.834 kb on - strand, within A4249_RS16675at 2795.834 kb on - strand, within A4249_RS16675at 2795.834 kb on - strand, within A4249_RS16675at 2795.834 kb on - strand, within A4249_RS16675at 2795.954 kb on + strand, within A4249_RS16675at 2795.955 kb on - strand, within A4249_RS16675at 2795.955 kb on - strand, within A4249_RS16675at 2795.955 kb on - strand, within A4249_RS16675at 2795.955 kb on - strand, within A4249_RS16675at 2795.994 kb on + strand, within A4249_RS16675at 2796.045 kb on + strand, within A4249_RS16675at 2796.091 kb on - strand, within A4249_RS16675at 2796.127 kb on + strand, within A4249_RS16675at 2796.128 kb on - strand, within A4249_RS16675at 2796.159 kb on - strand, within A4249_RS16675at 2796.172 kb on + strand, within A4249_RS16675at 2796.219 kb on + strand, within A4249_RS16675at 2796.228 kb on - strand, within A4249_RS16675at 2796.247 kb on + strand, within A4249_RS16675at 2796.248 kb on - strand, within A4249_RS16675at 2796.345 kb on + strand, within A4249_RS16675at 2796.345 kb on + strand, within A4249_RS16675at 2796.346 kb on - strand, within A4249_RS16675at 2796.346 kb on - strand, within A4249_RS16675at 2796.361 kb on - strand, within A4249_RS16675at 2796.361 kb on - strand, within A4249_RS16675at 2796.361 kb on - strand, within A4249_RS16675at 2796.428 kb on + strandat 2796.428 kb on + strandat 2796.428 kb on + strandat 2796.428 kb on + strandat 2796.428 kb on + strandat 2796.428 kb on + strandat 2796.429 kb on - strandat 2796.429 kb on - strandat 2796.429 kb on - strandat 2796.429 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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2,791,676 + A4249_RS13830 0.56 +0.2
2,791,676 + A4249_RS13830 0.56 +0.5
2,791,676 + A4249_RS13830 0.56 +0.7
2,791,676 + A4249_RS13830 0.56 +0.4
2,791,677 - A4249_RS13830 0.56 -1.9
2,791,677 - A4249_RS13830 0.56 -0.9
2,791,677 - A4249_RS13830 0.56 -0.2
2,791,677 - A4249_RS13830 0.56 +0.3
2,791,678 + A4249_RS13830 0.56 -0.5
2,791,678 + A4249_RS13830 0.56 +1.2
2,791,678 + A4249_RS13830 0.56 -0.5
2,791,679 - A4249_RS13830 0.56 -1.3
2,791,679 - A4249_RS13830 0.56 +1.1
2,791,679 - A4249_RS13830 0.56 -0.9
2,791,679 - A4249_RS13830 0.56 -0.2
2,791,679 - A4249_RS13830 0.56 -0.2
2,791,679 - A4249_RS13830 0.56 -0.2
2,791,694 + A4249_RS13830 0.60 +0.0
2,791,694 + A4249_RS13830 0.60 +0.6
2,791,694 + A4249_RS13830 0.60 -1.4
2,791,694 + A4249_RS13830 0.60 +0.7
2,791,694 + A4249_RS13830 0.60 +0.5
2,791,695 - A4249_RS13830 0.60 -0.1
2,791,695 - A4249_RS13830 0.60 -0.9
2,791,695 - A4249_RS13830 0.60 -0.1
2,791,695 - A4249_RS13830 0.60 -0.1
2,792,059 + A4249_RS13835 0.31 -0.1
2,792,059 + A4249_RS13835 0.31 +0.6
2,792,059 + A4249_RS13835 0.31 -0.6
2,792,059 + A4249_RS13835 0.31 -0.4
2,792,060 - A4249_RS13835 0.31 -2.2
2,792,060 - A4249_RS13835 0.31 -0.1
2,792,060 - A4249_RS13835 0.31 -0.3
2,792,060 - A4249_RS13835 0.31 +1.3
2,792,060 - A4249_RS13835 0.31 -0.1
2,792,060 - A4249_RS13835 0.31 -0.9
2,792,060 - A4249_RS13835 0.31 -0.1
2,792,060 - A4249_RS13835 0.31 +0.2
2,792,060 - A4249_RS13835 0.31 +0.9
2,792,060 - A4249_RS13835 0.31 +1.2
2,792,060 - A4249_RS13835 0.31 -0.3
2,792,083 + A4249_RS13835 0.34 -0.2
2,792,083 + A4249_RS13835 0.34 -0.8
2,792,084 - A4249_RS13835 0.35 +1.2
2,792,284 + A4249_RS13835 0.67 +0.1
2,792,284 + A4249_RS13835 0.67 -1.0
2,792,284 + A4249_RS13835 0.67 -0.4
2,792,285 - A4249_RS13835 0.67 -0.7
2,792,285 - A4249_RS13835 0.67 +0.6
2,792,285 - A4249_RS13835 0.67 +0.1
2,792,285 - A4249_RS13835 0.67 -1.4
2,792,333 - A4249_RS13835 0.75 -1.6
2,792,387 - A4249_RS13835 0.84 -0.0
2,792,387 - A4249_RS13835 0.84 -1.6
2,792,387 - A4249_RS13835 0.84 -0.2
2,792,387 - A4249_RS13835 0.84 +0.7
2,792,513 + +0.7
2,792,513 + -0.1
2,792,513 + +0.2
2,792,513 + +0.0
2,792,513 + -0.9
2,792,513 + -0.6
2,792,513 + +0.7
2,792,513 + -0.4
2,792,514 - +1.1
2,792,514 - +0.7
2,792,514 - -0.9
2,792,514 - +0.4
2,792,514 - -1.4
2,792,514 - -0.9
2,792,514 - -0.6
2,795,443 - -1.1
2,795,443 - +0.7
2,795,443 - +0.4
2,795,446 + -0.8
2,795,446 + +0.3
2,795,447 - -0.9
2,795,447 - -0.8
2,795,447 - +0.0
2,795,447 - -1.9
2,795,447 - +0.3
2,795,473 + -0.0
2,795,499 - -0.0
2,795,516 + -1.0
2,795,516 + +1.3
2,795,516 + +0.3
2,795,516 + -1.0
2,795,516 + +0.1
2,795,516 + -0.9
2,795,516 + +1.6
2,795,516 + +0.9
2,795,516 + +1.3
2,795,516 + -0.5
2,795,517 - -0.6
2,795,517 - -0.3
2,795,517 - +1.5
2,795,517 - +0.6
2,795,517 - -1.2
2,795,517 - +0.2
2,795,533 + +0.3
2,795,533 + -0.4
2,795,534 - -0.4
2,795,534 - -1.4
2,795,534 - -1.0
2,795,655 + A4249_RS16675 0.15 -0.1
2,795,655 + A4249_RS16675 0.15 -0.4
2,795,655 + A4249_RS16675 0.15 -0.1
2,795,655 + A4249_RS16675 0.15 -0.8
2,795,655 + A4249_RS16675 0.15 -2.2
2,795,655 + A4249_RS16675 0.15 -0.4
2,795,655 + A4249_RS16675 0.15 -0.3
2,795,655 + A4249_RS16675 0.15 +1.8
2,795,655 + A4249_RS16675 0.15 +0.4
2,795,655 + A4249_RS16675 0.15 -0.2
2,795,655 + A4249_RS16675 0.15 -0.9
2,795,656 - A4249_RS16675 0.15 -0.1
2,795,656 - A4249_RS16675 0.15 +0.3
2,795,656 - A4249_RS16675 0.15 +0.5
2,795,656 - A4249_RS16675 0.15 -1.1
2,795,656 - A4249_RS16675 0.15 +1.2
2,795,656 - A4249_RS16675 0.15 -0.0
2,795,656 - A4249_RS16675 0.15 -0.5
2,795,656 - A4249_RS16675 0.15 -1.8
2,795,656 - A4249_RS16675 0.15 -0.1
2,795,656 - A4249_RS16675 0.15 +0.1
2,795,656 - A4249_RS16675 0.15 +0.5
2,795,720 + A4249_RS16675 0.21 -0.1
2,795,721 - A4249_RS16675 0.21 -0.6
2,795,721 - A4249_RS16675 0.21 +0.5
2,795,780 + A4249_RS16675 0.28 +1.0
2,795,794 + A4249_RS16675 0.29 +0.6
2,795,795 - A4249_RS16675 0.29 -0.0
2,795,795 - A4249_RS16675 0.29 -1.0
2,795,831 + A4249_RS16675 0.33 +0.2
2,795,831 + A4249_RS16675 0.33 -0.3
2,795,831 + A4249_RS16675 0.33 +0.7
2,795,831 + A4249_RS16675 0.33 -0.1
2,795,831 + A4249_RS16675 0.33 -1.4
2,795,832 - A4249_RS16675 0.33 -0.9
2,795,833 + A4249_RS16675 0.33 -0.1
2,795,834 - A4249_RS16675 0.33 -0.4
2,795,834 - A4249_RS16675 0.33 -0.2
2,795,834 - A4249_RS16675 0.33 +0.2
2,795,834 - A4249_RS16675 0.33 -1.0
2,795,954 + A4249_RS16675 0.46 +0.6
2,795,955 - A4249_RS16675 0.46 -0.2
2,795,955 - A4249_RS16675 0.46 -1.7
2,795,955 - A4249_RS16675 0.46 -0.8
2,795,955 - A4249_RS16675 0.46 -0.5
2,795,994 + A4249_RS16675 0.50 +0.2
2,796,045 + A4249_RS16675 0.56 +0.9
2,796,091 - A4249_RS16675 0.60 -0.8
2,796,127 + A4249_RS16675 0.64 -0.6
2,796,128 - A4249_RS16675 0.64 +0.4
2,796,159 - A4249_RS16675 0.68 -0.7
2,796,172 + A4249_RS16675 0.69 -1.7
2,796,219 + A4249_RS16675 0.74 +0.0
2,796,228 - A4249_RS16675 0.75 +2.0
2,796,247 + A4249_RS16675 0.77 -0.0
2,796,248 - A4249_RS16675 0.77 +1.5
2,796,345 + A4249_RS16675 0.87 +0.3
2,796,345 + A4249_RS16675 0.87 -0.6
2,796,346 - A4249_RS16675 0.87 +0.1
2,796,346 - A4249_RS16675 0.87 -0.0
2,796,361 - A4249_RS16675 0.89 -0.8
2,796,361 - A4249_RS16675 0.89 -0.5
2,796,361 - A4249_RS16675 0.89 +0.7
2,796,428 + -0.6
2,796,428 + +0.5
2,796,428 + +1.5
2,796,428 + +0.2
2,796,428 + -0.0
2,796,428 + +0.2
2,796,429 - +0.9
2,796,429 - -0.6
2,796,429 - +0.2
2,796,429 - -0.1

Or see this region's nucleotide sequence