Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS13590

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS13585 and A4249_RS13590 are separated by 51 nucleotidesA4249_RS13590 and A4249_RS13595 are separated by 36 nucleotides A4249_RS13585: A4249_RS13585 - translational GTPase TypA, at 2,743,555 to 2,745,387 _RS13585 A4249_RS13590: A4249_RS13590 - [protein-PII] uridylyltransferase, at 2,745,439 to 2,748,144 _RS13590 A4249_RS13595: A4249_RS13595 - murein biosynthesis integral membrane protein MurJ, at 2,748,181 to 2,749,776 _RS13595 Position (kb) 2745 2746 2747 2748 2749Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2744.617 kb on - strand, within A4249_RS13585at 2745.386 kb on - strandat 2745.425 kb on + strandat 2745.426 kb on - strandat 2745.426 kb on - strandat 2745.427 kb on + strandat 2745.427 kb on + strandat 2745.428 kb on - strandat 2745.428 kb on - strandat 2745.532 kb on + strandat 2745.532 kb on + strandat 2745.532 kb on + strandat 2745.532 kb on + strandat 2745.533 kb on - strandat 2745.533 kb on - strandat 2745.533 kb on - strandat 2745.533 kb on - strandat 2745.533 kb on - strandat 2745.604 kb on + strandat 2745.820 kb on + strand, within A4249_RS13590at 2745.820 kb on + strand, within A4249_RS13590at 2745.820 kb on + strand, within A4249_RS13590at 2745.820 kb on + strand, within A4249_RS13590at 2745.820 kb on + strand, within A4249_RS13590at 2745.821 kb on - strand, within A4249_RS13590at 2745.821 kb on - strand, within A4249_RS13590at 2745.821 kb on - strand, within A4249_RS13590at 2745.821 kb on - strand, within A4249_RS13590at 2745.821 kb on - strand, within A4249_RS13590at 2745.821 kb on - strand, within A4249_RS13590at 2745.821 kb on - strand, within A4249_RS13590at 2746.135 kb on + strand, within A4249_RS13590at 2746.136 kb on - strand, within A4249_RS13590at 2746.259 kb on + strand, within A4249_RS13590at 2746.259 kb on + strand, within A4249_RS13590at 2746.259 kb on + strand, within A4249_RS13590at 2746.260 kb on - strand, within A4249_RS13590at 2746.260 kb on - strand, within A4249_RS13590at 2746.387 kb on + strand, within A4249_RS13590at 2746.388 kb on - strand, within A4249_RS13590at 2746.388 kb on - strand, within A4249_RS13590at 2746.437 kb on + strand, within A4249_RS13590at 2746.855 kb on + strand, within A4249_RS13590at 2746.855 kb on + strand, within A4249_RS13590at 2746.855 kb on + strand, within A4249_RS13590at 2746.856 kb on - strand, within A4249_RS13590at 2746.856 kb on - strand, within A4249_RS13590at 2746.856 kb on - strand, within A4249_RS13590at 2746.867 kb on - strand, within A4249_RS13590at 2746.881 kb on + strand, within A4249_RS13590at 2746.881 kb on + strand, within A4249_RS13590at 2746.881 kb on + strand, within A4249_RS13590at 2746.881 kb on + strand, within A4249_RS13590at 2746.881 kb on + strand, within A4249_RS13590at 2746.881 kb on + strand, within A4249_RS13590at 2746.881 kb on + strand, within A4249_RS13590at 2746.882 kb on - strand, within A4249_RS13590at 2746.882 kb on - strand, within A4249_RS13590at 2746.882 kb on - strand, within A4249_RS13590at 2747.152 kb on + strand, within A4249_RS13590at 2747.320 kb on + strand, within A4249_RS13590at 2747.321 kb on - strand, within A4249_RS13590at 2747.321 kb on - strand, within A4249_RS13590at 2747.321 kb on - strand, within A4249_RS13590at 2747.321 kb on - strand, within A4249_RS13590at 2747.908 kb on + strandat 2747.909 kb on - strandat 2747.935 kb on + strandat 2747.935 kb on + strandat 2747.935 kb on + strandat 2747.936 kb on - strandat 2747.936 kb on - strandat 2747.936 kb on - strandat 2747.936 kb on - strandat 2748.143 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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2,744,617 - A4249_RS13585 0.58 +2.7
2,745,386 - -0.3
2,745,425 + +0.6
2,745,426 - -1.0
2,745,426 - +1.1
2,745,427 + +0.7
2,745,427 + -0.7
2,745,428 - -0.9
2,745,428 - +0.4
2,745,532 + +1.1
2,745,532 + -2.0
2,745,532 + +0.9
2,745,532 + +1.0
2,745,533 - +0.4
2,745,533 - +0.7
2,745,533 - -0.1
2,745,533 - +3.1
2,745,533 - +1.7
2,745,604 + -0.1
2,745,820 + A4249_RS13590 0.14 +1.4
2,745,820 + A4249_RS13590 0.14 +0.5
2,745,820 + A4249_RS13590 0.14 +0.1
2,745,820 + A4249_RS13590 0.14 -1.1
2,745,820 + A4249_RS13590 0.14 +0.1
2,745,821 - A4249_RS13590 0.14 +0.2
2,745,821 - A4249_RS13590 0.14 +1.1
2,745,821 - A4249_RS13590 0.14 +0.1
2,745,821 - A4249_RS13590 0.14 +1.1
2,745,821 - A4249_RS13590 0.14 +1.7
2,745,821 - A4249_RS13590 0.14 -1.0
2,745,821 - A4249_RS13590 0.14 +0.1
2,746,135 + A4249_RS13590 0.26 +0.4
2,746,136 - A4249_RS13590 0.26 +3.3
2,746,259 + A4249_RS13590 0.30 +0.1
2,746,259 + A4249_RS13590 0.30 +1.4
2,746,259 + A4249_RS13590 0.30 +1.1
2,746,260 - A4249_RS13590 0.30 +0.4
2,746,260 - A4249_RS13590 0.30 -0.5
2,746,387 + A4249_RS13590 0.35 +1.7
2,746,388 - A4249_RS13590 0.35 +0.7
2,746,388 - A4249_RS13590 0.35 +1.0
2,746,437 + A4249_RS13590 0.37 +0.6
2,746,855 + A4249_RS13590 0.52 +1.7
2,746,855 + A4249_RS13590 0.52 +1.7
2,746,855 + A4249_RS13590 0.52 -0.3
2,746,856 - A4249_RS13590 0.52 -0.6
2,746,856 - A4249_RS13590 0.52 +1.7
2,746,856 - A4249_RS13590 0.52 +2.7
2,746,867 - A4249_RS13590 0.53 +0.4
2,746,881 + A4249_RS13590 0.53 -0.1
2,746,881 + A4249_RS13590 0.53 -0.1
2,746,881 + A4249_RS13590 0.53 +0.4
2,746,881 + A4249_RS13590 0.53 +0.4
2,746,881 + A4249_RS13590 0.53 -0.3
2,746,881 + A4249_RS13590 0.53 +1.1
2,746,881 + A4249_RS13590 0.53 +1.1
2,746,882 - A4249_RS13590 0.53 +0.2
2,746,882 - A4249_RS13590 0.53 +3.7
2,746,882 - A4249_RS13590 0.53 +0.7
2,747,152 + A4249_RS13590 0.63 -1.9
2,747,320 + A4249_RS13590 0.70 -0.7
2,747,321 - A4249_RS13590 0.70 -0.3
2,747,321 - A4249_RS13590 0.70 -0.4
2,747,321 - A4249_RS13590 0.70 -0.3
2,747,321 - A4249_RS13590 0.70 -0.1
2,747,908 + +0.4
2,747,909 - -0.6
2,747,935 + +0.4
2,747,935 + -0.1
2,747,935 + +0.4
2,747,936 - +0.4
2,747,936 - +1.1
2,747,936 - +0.2
2,747,936 - +1.1
2,748,143 - +0.4

Or see this region's nucleotide sequence