Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS12675 and A4249_RS12680 are separated by 85 nucleotides A4249_RS12680 and A4249_RS12685 are separated by 35 nucleotides
A4249_RS12675: A4249_RS12675 - malate dehydrogenase, at 2,542,182 to 2,543,144
_RS12675
A4249_RS12680: A4249_RS12680 - YbjN domain-containing protein, at 2,543,230 to 2,543,730
_RS12680
A4249_RS12685: A4249_RS12685 - cell division protein ZapE, at 2,543,766 to 2,544,857
_RS12685
Position (kb)
2543
2544 Strain fitness (log2 ratio)
-2
-1
0
1 at 2543.117 kb on + strand at 2543.117 kb on + strand at 2543.142 kb on + strand at 2543.143 kb on - strand at 2543.143 kb on - strand at 2543.143 kb on - strand at 2543.143 kb on - strand at 2543.247 kb on - strand at 2543.247 kb on - strand at 2543.345 kb on + strand, within A4249_RS12680 at 2543.345 kb on + strand, within A4249_RS12680 at 2543.346 kb on - strand, within A4249_RS12680 at 2543.346 kb on - strand, within A4249_RS12680 at 2543.396 kb on + strand, within A4249_RS12680 at 2543.397 kb on - strand, within A4249_RS12680 at 2543.501 kb on + strand, within A4249_RS12680 at 2543.501 kb on + strand, within A4249_RS12680 at 2543.502 kb on - strand, within A4249_RS12680 at 2543.502 kb on - strand, within A4249_RS12680 at 2543.502 kb on - strand, within A4249_RS12680 at 2543.502 kb on - strand, within A4249_RS12680 at 2543.502 kb on - strand, within A4249_RS12680 at 2543.502 kb on - strand, within A4249_RS12680 at 2543.502 kb on - strand, within A4249_RS12680 at 2543.502 kb on - strand, within A4249_RS12680 at 2543.502 kb on - strand, within A4249_RS12680 at 2543.756 kb on - strand at 2544.697 kb on + strand, within A4249_RS12685
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 2,543,117 + +0.7 2,543,117 + -0.1 2,543,142 + -0.9 2,543,143 - +0.2 2,543,143 - -0.6 2,543,143 - -1.5 2,543,143 - -0.9 2,543,247 - +0.4 2,543,247 - +1.1 2,543,345 + A4249_RS12680 0.23 -0.9 2,543,345 + A4249_RS12680 0.23 -2.0 2,543,346 - A4249_RS12680 0.23 +0.3 2,543,346 - A4249_RS12680 0.23 -0.3 2,543,396 + A4249_RS12680 0.33 -1.0 2,543,397 - A4249_RS12680 0.33 -1.0 2,543,501 + A4249_RS12680 0.54 -1.2 2,543,501 + A4249_RS12680 0.54 -0.7 2,543,502 - A4249_RS12680 0.54 +0.1 2,543,502 - A4249_RS12680 0.54 +0.0 2,543,502 - A4249_RS12680 0.54 -1.2 2,543,502 - A4249_RS12680 0.54 -0.4 2,543,502 - A4249_RS12680 0.54 -2.1 2,543,502 - A4249_RS12680 0.54 -1.0 2,543,502 - A4249_RS12680 0.54 +0.2 2,543,502 - A4249_RS12680 0.54 -0.3 2,543,502 - A4249_RS12680 0.54 +0.3 2,543,756 - +0.1 2,544,697 + A4249_RS12685 0.85 +1.4
Or see this region's nucleotide sequence