Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS12390 and A4249_RS12395 are separated by 13 nucleotides A4249_RS12395 and A4249_RS12400 overlap by 1 nucleotides A4249_RS12400 and A4249_RS12405 are separated by 152 nucleotides A4249_RS12405 and A4249_RS12410 are separated by 365 nucleotides
A4249_RS12390: A4249_RS12390 - ATP-dependent protease subunit HslV, at 2,484,863 to 2,485,423
_RS12390
A4249_RS12395: A4249_RS12395 - ATP-dependent Clp protease proteolytic subunit, at 2,485,437 to 2,486,018
_RS12395
A4249_RS12400: A4249_RS12400 - hypothetical protein, at 2,486,018 to 2,486,224
_RS12400
A4249_RS12405: A4249_RS12405 - histidine--tRNA ligase, at 2,486,377 to 2,487,867
_RS12405
A4249_RS12410: A4249_RS12410 - M13 family peptidase, at 2,488,233 to 2,490,356
_RS12410
Position (kb)
2486
2487
2488 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2485.382 kb on + strand at 2485.382 kb on + strand at 2485.489 kb on + strand at 2485.489 kb on + strand at 2485.489 kb on + strand at 2485.489 kb on + strand at 2485.490 kb on - strand at 2485.490 kb on - strand at 2485.490 kb on - strand at 2485.490 kb on - strand at 2485.490 kb on - strand at 2485.705 kb on + strand, within A4249_RS12395 at 2485.706 kb on - strand, within A4249_RS12395 at 2485.753 kb on + strand, within A4249_RS12395 at 2485.753 kb on + strand, within A4249_RS12395 at 2485.754 kb on - strand, within A4249_RS12395 at 2485.754 kb on - strand, within A4249_RS12395 at 2485.754 kb on - strand, within A4249_RS12395 at 2485.754 kb on - strand, within A4249_RS12395 at 2485.754 kb on - strand, within A4249_RS12395 at 2485.754 kb on - strand, within A4249_RS12395 at 2485.927 kb on + strand, within A4249_RS12395 at 2485.927 kb on + strand, within A4249_RS12395 at 2485.927 kb on + strand, within A4249_RS12395 at 2485.927 kb on + strand, within A4249_RS12395 at 2485.927 kb on + strand, within A4249_RS12395 at 2485.927 kb on + strand, within A4249_RS12395 at 2485.928 kb on - strand, within A4249_RS12395 at 2485.928 kb on - strand, within A4249_RS12395 at 2485.928 kb on - strand, within A4249_RS12395 at 2485.928 kb on - strand, within A4249_RS12395 at 2485.937 kb on - strand, within A4249_RS12395 at 2485.937 kb on - strand, within A4249_RS12395 at 2485.971 kb on - strand at 2486.058 kb on + strand, within A4249_RS12400 at 2486.320 kb on + strand at 2486.321 kb on - strand at 2487.900 kb on - strand at 2487.908 kb on + strand at 2487.909 kb on - strand at 2488.049 kb on - strand at 2488.075 kb on + strand at 2488.076 kb on - strand at 2488.076 kb on - strand at 2488.146 kb on + strand at 2488.147 kb on - strand at 2488.147 kb on - strand at 2488.179 kb on - strand at 2488.179 kb on - strand at 2488.267 kb on + strand at 2488.268 kb on - strand at 2488.268 kb on - strand at 2488.270 kb on + strand at 2488.270 kb on + strand at 2488.270 kb on + strand at 2488.270 kb on + strand at 2488.270 kb on + strand at 2488.270 kb on + strand at 2488.270 kb on + strand at 2488.271 kb on - strand at 2488.271 kb on - strand at 2488.303 kb on + strand at 2488.304 kb on - strand at 2488.399 kb on + strand at 2488.399 kb on + strand at 2488.400 kb on - strand at 2488.429 kb on + strand at 2488.429 kb on + strand at 2488.429 kb on + strand at 2488.429 kb on + strand at 2488.429 kb on + strand at 2488.430 kb on - strand at 2488.430 kb on - strand at 2488.430 kb on - strand at 2488.430 kb on - strand at 2488.430 kb on - strand at 2488.498 kb on + strand, within A4249_RS12410 at 2488.498 kb on + strand, within A4249_RS12410 at 2488.498 kb on + strand, within A4249_RS12410 at 2488.498 kb on + strand, within A4249_RS12410 at 2488.499 kb on - strand, within A4249_RS12410 at 2488.499 kb on - strand, within A4249_RS12410 at 2488.499 kb on - strand, within A4249_RS12410 at 2488.499 kb on - strand, within A4249_RS12410 at 2488.591 kb on + strand, within A4249_RS12410 at 2488.592 kb on - strand, within A4249_RS12410 at 2488.592 kb on - strand, within A4249_RS12410 at 2488.592 kb on - strand, within A4249_RS12410 at 2488.592 kb on - strand, within A4249_RS12410 at 2488.592 kb on - strand, within A4249_RS12410 at 2488.600 kb on + strand, within A4249_RS12410 at 2488.600 kb on + strand, within A4249_RS12410 at 2488.600 kb on + strand, within A4249_RS12410 at 2488.600 kb on + strand, within A4249_RS12410 at 2488.601 kb on - strand, within A4249_RS12410 at 2488.601 kb on - strand, within A4249_RS12410 at 2488.601 kb on - strand, within A4249_RS12410 at 2488.753 kb on + strand, within A4249_RS12410 at 2488.753 kb on + strand, within A4249_RS12410 at 2488.753 kb on + strand, within A4249_RS12410 at 2488.754 kb on - strand, within A4249_RS12410 at 2488.754 kb on - strand, within A4249_RS12410 at 2488.754 kb on - strand, within A4249_RS12410 at 2488.754 kb on - strand, within A4249_RS12410 at 2488.754 kb on - strand, within A4249_RS12410 at 2488.754 kb on - strand, within A4249_RS12410 at 2488.754 kb on - strand, within A4249_RS12410 at 2488.840 kb on + strand, within A4249_RS12410 at 2488.840 kb on + strand, within A4249_RS12410 at 2488.840 kb on + strand, within A4249_RS12410 at 2488.841 kb on - strand, within A4249_RS12410 at 2488.841 kb on - strand, within A4249_RS12410 at 2488.841 kb on - strand, within A4249_RS12410 at 2488.841 kb on - strand, within A4249_RS12410 at 2488.841 kb on - strand, within A4249_RS12410 at 2488.841 kb on - strand, within A4249_RS12410 at 2488.841 kb on - strand, within A4249_RS12410 at 2488.841 kb on - strand, within A4249_RS12410 at 2488.841 kb on - strand, within A4249_RS12410 at 2488.844 kb on - strand, within A4249_RS12410 at 2488.844 kb on - strand, within A4249_RS12410
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 2,485,382 + -2.1 2,485,382 + -0.7 2,485,489 + -1.0 2,485,489 + +0.1 2,485,489 + +1.5 2,485,489 + +0.4 2,485,490 - -1.3 2,485,490 - +0.8 2,485,490 - +1.4 2,485,490 - -1.8 2,485,490 - +0.4 2,485,705 + A4249_RS12395 0.46 -1.6 2,485,706 - A4249_RS12395 0.46 +0.3 2,485,753 + A4249_RS12395 0.54 +0.4 2,485,753 + A4249_RS12395 0.54 +1.0 2,485,754 - A4249_RS12395 0.54 -0.1 2,485,754 - A4249_RS12395 0.54 -0.8 2,485,754 - A4249_RS12395 0.54 +0.2 2,485,754 - A4249_RS12395 0.54 -0.0 2,485,754 - A4249_RS12395 0.54 -1.3 2,485,754 - A4249_RS12395 0.54 -2.3 2,485,927 + A4249_RS12395 0.84 -0.7 2,485,927 + A4249_RS12395 0.84 +1.1 2,485,927 + A4249_RS12395 0.84 +0.6 2,485,927 + A4249_RS12395 0.84 -1.1 2,485,927 + A4249_RS12395 0.84 -0.8 2,485,927 + A4249_RS12395 0.84 +0.1 2,485,928 - A4249_RS12395 0.84 -0.4 2,485,928 - A4249_RS12395 0.84 +0.2 2,485,928 - A4249_RS12395 0.84 -0.1 2,485,928 - A4249_RS12395 0.84 +0.3 2,485,937 - A4249_RS12395 0.86 +0.3 2,485,937 - A4249_RS12395 0.86 -1.9 2,485,971 - +0.0 2,486,058 + A4249_RS12400 0.19 -0.1 2,486,320 + -1.4 2,486,321 - -1.8 2,487,900 - -0.2 2,487,908 + +0.6 2,487,909 - -0.1 2,488,049 - -0.2 2,488,075 + +0.3 2,488,076 - +0.1 2,488,076 - +0.4 2,488,146 + +1.0 2,488,147 - +0.5 2,488,147 - -0.9 2,488,179 - -0.8 2,488,179 - -1.2 2,488,267 + -0.2 2,488,268 - -0.9 2,488,268 - -0.9 2,488,270 + +0.3 2,488,270 + -0.8 2,488,270 + +1.1 2,488,270 + +1.1 2,488,270 + -1.8 2,488,270 + -0.0 2,488,270 + +0.7 2,488,271 - -0.3 2,488,271 - -1.5 2,488,303 + -0.8 2,488,304 - -2.1 2,488,399 + -0.9 2,488,399 + +0.8 2,488,400 - +0.2 2,488,429 + -0.2 2,488,429 + +1.2 2,488,429 + +0.7 2,488,429 + -0.2 2,488,429 + +0.4 2,488,430 - -0.1 2,488,430 - -0.1 2,488,430 - -0.8 2,488,430 - +2.0 2,488,430 - -0.5 2,488,498 + A4249_RS12410 0.12 +0.5 2,488,498 + A4249_RS12410 0.12 -2.1 2,488,498 + A4249_RS12410 0.12 -2.5 2,488,498 + A4249_RS12410 0.12 +0.0 2,488,499 - A4249_RS12410 0.13 -1.6 2,488,499 - A4249_RS12410 0.13 -1.3 2,488,499 - A4249_RS12410 0.13 +0.2 2,488,499 - A4249_RS12410 0.13 -0.3 2,488,591 + A4249_RS12410 0.17 -0.2 2,488,592 - A4249_RS12410 0.17 +0.2 2,488,592 - A4249_RS12410 0.17 +0.3 2,488,592 - A4249_RS12410 0.17 +0.4 2,488,592 - A4249_RS12410 0.17 +0.5 2,488,592 - A4249_RS12410 0.17 -0.2 2,488,600 + A4249_RS12410 0.17 +2.0 2,488,600 + A4249_RS12410 0.17 +0.7 2,488,600 + A4249_RS12410 0.17 +1.0 2,488,600 + A4249_RS12410 0.17 +0.7 2,488,601 - A4249_RS12410 0.17 +0.5 2,488,601 - A4249_RS12410 0.17 -0.4 2,488,601 - A4249_RS12410 0.17 +0.6 2,488,753 + A4249_RS12410 0.24 -0.6 2,488,753 + A4249_RS12410 0.24 +0.9 2,488,753 + A4249_RS12410 0.24 +0.5 2,488,754 - A4249_RS12410 0.25 +0.1 2,488,754 - A4249_RS12410 0.25 +1.8 2,488,754 - A4249_RS12410 0.25 +0.7 2,488,754 - A4249_RS12410 0.25 +0.0 2,488,754 - A4249_RS12410 0.25 +1.4 2,488,754 - A4249_RS12410 0.25 -0.6 2,488,754 - A4249_RS12410 0.25 -0.0 2,488,840 + A4249_RS12410 0.29 -0.5 2,488,840 + A4249_RS12410 0.29 +0.7 2,488,840 + A4249_RS12410 0.29 +1.0 2,488,841 - A4249_RS12410 0.29 +0.6 2,488,841 - A4249_RS12410 0.29 +0.2 2,488,841 - A4249_RS12410 0.29 -0.6 2,488,841 - A4249_RS12410 0.29 +1.2 2,488,841 - A4249_RS12410 0.29 -0.3 2,488,841 - A4249_RS12410 0.29 -0.3 2,488,841 - A4249_RS12410 0.29 -0.9 2,488,841 - A4249_RS12410 0.29 +1.3 2,488,841 - A4249_RS12410 0.29 +0.2 2,488,844 - A4249_RS12410 0.29 -0.5 2,488,844 - A4249_RS12410 0.29 -0.8
Or see this region's nucleotide sequence