Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS11900 and A4249_RS11905 are separated by 216 nucleotides A4249_RS11905 and A4249_RS11910 are separated by 60 nucleotides A4249_RS11910 and A4249_RS11915 are separated by 93 nucleotides
A4249_RS11900: A4249_RS11900 - hypothetical protein, at 2,389,840 to 2,392,710
_RS11900
A4249_RS11905: A4249_RS11905 - hypothetical protein, at 2,392,927 to 2,393,145
_RS11905
A4249_RS11910: A4249_RS11910 - pyridoxamine 5'-phosphate oxidase family protein, at 2,393,206 to 2,393,703
_RS11910
A4249_RS11915: A4249_RS11915 - hypothetical protein, at 2,393,797 to 2,394,474
_RS11915
Position (kb)
2392
2393
2394 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2392.187 kb on + strand, within A4249_RS11900 at 2392.496 kb on + strand at 2392.496 kb on + strand at 2392.496 kb on + strand at 2392.497 kb on - strand at 2392.497 kb on - strand at 2392.497 kb on - strand at 2392.497 kb on - strand at 2392.497 kb on - strand at 2392.497 kb on - strand at 2392.497 kb on - strand at 2392.535 kb on + strand at 2392.571 kb on + strand at 2392.742 kb on + strand at 2392.742 kb on + strand at 2392.742 kb on + strand at 2392.743 kb on - strand at 2392.744 kb on + strand at 2392.745 kb on - strand at 2392.764 kb on + strand at 2392.789 kb on + strand at 2392.789 kb on + strand at 2392.789 kb on + strand at 2393.084 kb on + strand, within A4249_RS11905 at 2393.085 kb on - strand, within A4249_RS11905 at 2393.085 kb on - strand, within A4249_RS11905 at 2393.085 kb on - strand, within A4249_RS11905 at 2393.085 kb on - strand, within A4249_RS11905 at 2393.085 kb on - strand, within A4249_RS11905 at 2393.133 kb on - strand at 2393.143 kb on + strand at 2393.144 kb on - strand at 2393.144 kb on - strand at 2393.144 kb on - strand at 2393.160 kb on + strand at 2393.160 kb on + strand at 2393.303 kb on - strand, within A4249_RS11910 at 2393.346 kb on + strand, within A4249_RS11910 at 2393.425 kb on + strand, within A4249_RS11910 at 2393.425 kb on + strand, within A4249_RS11910 at 2393.426 kb on - strand, within A4249_RS11910 at 2393.426 kb on - strand, within A4249_RS11910 at 2393.506 kb on + strand, within A4249_RS11910 at 2393.506 kb on + strand, within A4249_RS11910 at 2393.507 kb on - strand, within A4249_RS11910 at 2393.507 kb on - strand, within A4249_RS11910 at 2393.507 kb on - strand, within A4249_RS11910 at 2393.507 kb on - strand, within A4249_RS11910 at 2393.507 kb on - strand, within A4249_RS11910 at 2393.632 kb on + strand, within A4249_RS11910 at 2393.633 kb on - strand, within A4249_RS11910 at 2393.701 kb on + strand at 2393.701 kb on + strand at 2393.719 kb on + strand at 2393.719 kb on + strand at 2393.719 kb on + strand at 2393.720 kb on - strand at 2393.720 kb on - strand at 2393.720 kb on - strand at 2393.720 kb on - strand at 2393.720 kb on - strand at 2393.897 kb on + strand, within A4249_RS11915 at 2393.898 kb on - strand, within A4249_RS11915 at 2393.898 kb on - strand, within A4249_RS11915 at 2393.898 kb on - strand, within A4249_RS11915
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 2,392,187 + A4249_RS11900 0.82 +0.6 2,392,496 + -0.2 2,392,496 + +0.6 2,392,496 + -0.7 2,392,497 - +0.4 2,392,497 - -1.3 2,392,497 - +0.3 2,392,497 - -1.0 2,392,497 - -0.4 2,392,497 - +2.1 2,392,497 - -0.5 2,392,535 + +0.7 2,392,571 + -1.3 2,392,742 + -0.9 2,392,742 + -1.2 2,392,742 + -0.8 2,392,743 - -0.3 2,392,744 + -0.5 2,392,745 - -0.6 2,392,764 + +0.5 2,392,789 + -0.5 2,392,789 + +0.1 2,392,789 + -1.4 2,393,084 + A4249_RS11905 0.72 -0.3 2,393,085 - A4249_RS11905 0.72 +0.3 2,393,085 - A4249_RS11905 0.72 -2.2 2,393,085 - A4249_RS11905 0.72 +0.3 2,393,085 - A4249_RS11905 0.72 -1.8 2,393,085 - A4249_RS11905 0.72 -1.0 2,393,133 - +0.9 2,393,143 + -0.6 2,393,144 - -0.3 2,393,144 - -0.6 2,393,144 - +0.0 2,393,160 + +0.0 2,393,160 + -0.2 2,393,303 - A4249_RS11910 0.19 -0.1 2,393,346 + A4249_RS11910 0.28 +0.4 2,393,425 + A4249_RS11910 0.44 -0.6 2,393,425 + A4249_RS11910 0.44 +0.8 2,393,426 - A4249_RS11910 0.44 -0.2 2,393,426 - A4249_RS11910 0.44 -0.3 2,393,506 + A4249_RS11910 0.60 +1.2 2,393,506 + A4249_RS11910 0.60 -0.3 2,393,507 - A4249_RS11910 0.60 +0.7 2,393,507 - A4249_RS11910 0.60 +0.8 2,393,507 - A4249_RS11910 0.60 -0.3 2,393,507 - A4249_RS11910 0.60 +0.5 2,393,507 - A4249_RS11910 0.60 -0.2 2,393,632 + A4249_RS11910 0.86 -0.0 2,393,633 - A4249_RS11910 0.86 -0.1 2,393,701 + -0.6 2,393,701 + -0.5 2,393,719 + -1.4 2,393,719 + +0.8 2,393,719 + -0.7 2,393,720 - -0.1 2,393,720 - -0.2 2,393,720 - +1.2 2,393,720 - -0.5 2,393,720 - +2.0 2,393,897 + A4249_RS11915 0.15 +0.2 2,393,898 - A4249_RS11915 0.15 -0.5 2,393,898 - A4249_RS11915 0.15 -0.4 2,393,898 - A4249_RS11915 0.15 -0.8
Or see this region's nucleotide sequence