Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11760

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS11755 and A4249_RS11760 overlap by 1 nucleotidesA4249_RS11760 and A4249_RS11765 are separated by 56 nucleotidesA4249_RS11765 and A4249_RS11770 are separated by 28 nucleotides A4249_RS11755: A4249_RS11755 - efflux RND transporter periplasmic adaptor subunit, at 2,361,839 to 2,363,041 _RS11755 A4249_RS11760: A4249_RS11760 - TolC family protein, at 2,363,041 to 2,364,294 _RS11760 A4249_RS11765: A4249_RS11765 - hypothetical protein, at 2,364,351 to 2,364,707 _RS11765 A4249_RS11770: A4249_RS11770 - cation transporter, at 2,364,736 to 2,365,404 _RS11770 Position (kb) 2363 2364 2365Strain fitness (log2 ratio) -1 0 1 2 3at 2362.554 kb on + strand, within A4249_RS11755at 2362.554 kb on + strand, within A4249_RS11755at 2362.554 kb on + strand, within A4249_RS11755at 2362.554 kb on + strand, within A4249_RS11755at 2362.555 kb on - strand, within A4249_RS11755at 2362.555 kb on - strand, within A4249_RS11755at 2362.555 kb on - strand, within A4249_RS11755at 2362.555 kb on - strand, within A4249_RS11755at 2362.555 kb on - strand, within A4249_RS11755at 2362.555 kb on - strand, within A4249_RS11755at 2362.746 kb on - strand, within A4249_RS11755at 2363.219 kb on + strand, within A4249_RS11760at 2363.472 kb on + strand, within A4249_RS11760at 2363.672 kb on + strand, within A4249_RS11760at 2363.672 kb on + strand, within A4249_RS11760at 2363.673 kb on - strand, within A4249_RS11760at 2363.673 kb on - strand, within A4249_RS11760at 2363.870 kb on + strand, within A4249_RS11760at 2363.870 kb on + strand, within A4249_RS11760at 2363.870 kb on + strand, within A4249_RS11760at 2363.870 kb on + strand, within A4249_RS11760at 2363.871 kb on - strand, within A4249_RS11760at 2363.871 kb on - strand, within A4249_RS11760at 2364.050 kb on + strand, within A4249_RS11760at 2364.051 kb on - strand, within A4249_RS11760at 2364.128 kb on + strand, within A4249_RS11760at 2364.128 kb on + strand, within A4249_RS11760at 2364.128 kb on + strand, within A4249_RS11760at 2364.188 kb on + strandat 2364.188 kb on + strandat 2364.188 kb on + strandat 2364.188 kb on + strandat 2364.189 kb on - strandat 2364.189 kb on - strandat 2364.189 kb on - strandat 2364.189 kb on - strandat 2364.189 kb on - strandat 2364.189 kb on - strandat 2364.189 kb on - strandat 2364.707 kb on + strandat 2364.707 kb on + strandat 2364.707 kb on + strandat 2364.707 kb on + strandat 2364.707 kb on + strandat 2364.707 kb on + strandat 2364.708 kb on - strandat 2364.708 kb on - strandat 2364.708 kb on - strandat 2364.708 kb on - strandat 2364.708 kb on - strandat 2364.708 kb on - strandat 2364.708 kb on - strandat 2364.708 kb on - strandat 2364.725 kb on + strandat 2364.781 kb on - strandat 2364.995 kb on - strand, within A4249_RS11770at 2365.184 kb on + strand, within A4249_RS11770at 2365.185 kb on - strand, within A4249_RS11770at 2365.185 kb on - strand, within A4249_RS11770at 2365.284 kb on + strand, within A4249_RS11770

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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2,362,554 + A4249_RS11755 0.59 +1.9
2,362,554 + A4249_RS11755 0.59 +0.4
2,362,554 + A4249_RS11755 0.59 +0.5
2,362,554 + A4249_RS11755 0.59 -0.1
2,362,555 - A4249_RS11755 0.60 -0.0
2,362,555 - A4249_RS11755 0.60 -1.0
2,362,555 - A4249_RS11755 0.60 +0.0
2,362,555 - A4249_RS11755 0.60 -0.0
2,362,555 - A4249_RS11755 0.60 +0.1
2,362,555 - A4249_RS11755 0.60 -0.1
2,362,746 - A4249_RS11755 0.75 -0.5
2,363,219 + A4249_RS11760 0.14 +2.9
2,363,472 + A4249_RS11760 0.34 -1.2
2,363,672 + A4249_RS11760 0.50 +0.7
2,363,672 + A4249_RS11760 0.50 -0.3
2,363,673 - A4249_RS11760 0.50 -0.9
2,363,673 - A4249_RS11760 0.50 +0.3
2,363,870 + A4249_RS11760 0.66 -0.6
2,363,870 + A4249_RS11760 0.66 -0.2
2,363,870 + A4249_RS11760 0.66 -0.2
2,363,870 + A4249_RS11760 0.66 +0.5
2,363,871 - A4249_RS11760 0.66 -0.4
2,363,871 - A4249_RS11760 0.66 -0.2
2,364,050 + A4249_RS11760 0.80 -0.4
2,364,051 - A4249_RS11760 0.81 +0.6
2,364,128 + A4249_RS11760 0.87 +0.4
2,364,128 + A4249_RS11760 0.87 +0.1
2,364,128 + A4249_RS11760 0.87 +1.1
2,364,188 + -1.5
2,364,188 + +0.2
2,364,188 + -0.5
2,364,188 + +0.3
2,364,189 - -0.3
2,364,189 - +0.7
2,364,189 - +0.5
2,364,189 - -0.5
2,364,189 - +0.6
2,364,189 - +0.6
2,364,189 - -0.2
2,364,707 + -1.2
2,364,707 + +0.3
2,364,707 + +0.3
2,364,707 + +0.1
2,364,707 + +0.8
2,364,707 + -1.2
2,364,708 - +0.1
2,364,708 - +0.2
2,364,708 - +0.3
2,364,708 - -0.4
2,364,708 - +0.9
2,364,708 - -0.6
2,364,708 - -0.8
2,364,708 - -1.1
2,364,725 + +0.2
2,364,781 - -0.6
2,364,995 - A4249_RS11770 0.39 -0.2
2,365,184 + A4249_RS11770 0.67 -0.0
2,365,185 - A4249_RS11770 0.67 +0.6
2,365,185 - A4249_RS11770 0.67 -1.1
2,365,284 + A4249_RS11770 0.82 -0.5

Or see this region's nucleotide sequence